RNA–Protein interactions for RNA: ENST00000554928.1

SYNE2-214, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 1,048 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-214ENST00000554928 LEMD3Q9Y2U8 911 aa15.46■□□□□ 0.07
SYNE2-214ENST00000554928 COG6Q9Y2V7 657 aa15.46■□□□□ 0.07
SYNE2-214ENST00000554928 ZBTB12Q9Y330 459 aaPredicted RBP15.46■□□□□ 0.07
SYNE2-214ENST00000554928 GNAI2P04899 355 aa15.45■□□□□ 0.06
SYNE2-214ENST00000554928 EPS15P42566 896 aa15.45■□□□□ 0.06
SYNE2-214ENST00000554928 GMPSP49915 693 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-214ENST00000554928 VGLL2Q8N8G2 317 aa15.45■□□□□ 0.06
SYNE2-214ENST00000554928 TAF1DQ9H5J8 278 aaPredicted RBP15.45■□□□□ 0.06
SYNE2-214ENST00000554928 SCN9AQ15858 1988 aa15.45■□□□□ 0.06
SYNE2-214ENST00000554928 EYA2O00167 538 aa15.44■□□□□ 0.06
SYNE2-214ENST00000554928 KCNJ4P48050 445 aa15.44■□□□□ 0.06
SYNE2-214ENST00000554928 C1QTNF8P60827 252 aa15.44■□□□□ 0.06
SYNE2-214ENST00000554928 MTX1Q13505 466 aa15.44■□□□□ 0.06
SYNE2-214ENST00000554928 MXD3Q9BW11 206 aa15.44■□□□□ 0.06
SYNE2-214ENST00000554928 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.44■□□□□ 0.06
SYNE2-214ENST00000554928 SRGAP3O43295 1099 aa15.43■□□□□ 0.06
SYNE2-214ENST00000554928 METTL24Q5JXM2 366 aa15.43■□□□□ 0.06
SYNE2-214ENST00000554928 MROH5Q6ZUA9 1318 aa15.43■□□□□ 0.06
SYNE2-214ENST00000554928 TOMM70O94826 608 aa15.42■□□□□ 0.06
SYNE2-214ENST00000554928 MVPQ14764 893 aaKnown RBP15.42■□□□□ 0.06
SYNE2-214ENST00000554928 COPRSQ9NQ92 184 aa15.42■□□□□ 0.06
SYNE2-214ENST00000554928 HACL1Q9UJ83 578 aa15.42■□□□□ 0.06
SYNE2-214ENST00000554928 G3V3G9 751 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 EPHX2P34913 555 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 GYG1P46976 350 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 POLA2Q14181 598 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 DCAF8Q5TAQ9 597 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 C15orf52Q6ZUT6 534 aaKnown RBP15.41■□□□□ 0.06
SYNE2-214ENST00000554928 CD209Q9NNX6 404 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 GPRC5DQ9NZD1 345 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 JAG2Q9Y219 1238 aa15.41■□□□□ 0.06
SYNE2-214ENST00000554928 PDE8BO95263 885 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 EGFRP00533 1210 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 VIL1P09327 827 aaKnown RBP15.4■□□□□ 0.06
SYNE2-214ENST00000554928 FGFR2P21802 821 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 UBE4AQ14139 1066 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 TNIP1Q15025 636 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 EAPPQ56P03 285 aaPredicted RBP15.4■□□□□ 0.06
SYNE2-214ENST00000554928 PODNQ7Z5L7 613 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 C16orf71Q8IYS4 520 aaPredicted RBP15.4■□□□□ 0.06
SYNE2-214ENST00000554928 RBM46Q8TBY0 533 aaKnown RBP15.4■□□□□ 0.06
SYNE2-214ENST00000554928 TRPM4Q8TD43 1214 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 COA1Q9GZY4 146 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 HDAC5Q9UQL6 1122 aa15.4■□□□□ 0.06
SYNE2-214ENST00000554928 IQCA1LA6NCM1 817 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 CIAO1O76071 339 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 ATP8B2P98198 1209 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 DACT2Q5SW24 774 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 CEP85Q6P2H3 762 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 MICALL2Q8IY33 904 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 FBXW7Q969H0 707 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 FAM84BQ96KN1 310 aaPredicted RBP15.39■□□□□ 0.05
SYNE2-214ENST00000554928 GMLQ99445 158 aa15.39■□□□□ 0.05
SYNE2-214ENST00000554928 ZNF646O15015 1829 aaPredicted RBP15.38■□□□□ 0.05
SYNE2-214ENST00000554928 USP17L3A6NCW0 530 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 USP17L4A6NCW7 530 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 HIRAP54198 1017 aaPredicted RBP15.38■□□□□ 0.05
SYNE2-214ENST00000554928 RRP1P56182 461 aaKnown RBP15.38■□□□□ 0.05
SYNE2-214ENST00000554928 GTF2IP78347 998 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 RSBN1LQ6PCB5 846 aaPredicted RBP15.38■□□□□ 0.05
SYNE2-214ENST00000554928 USP17L1Q7RTZ2 530 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 SAMD7Q7Z3H4 446 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 SSH3Q8TE77 659 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 ZBTB40Q9NUA8 1239 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 CNOT7Q9UIV1 285 aaKnown RBP15.38■□□□□ 0.05
SYNE2-214ENST00000554928 IQSEC3Q9UPP2 1182 aaPredicted RBP15.38■□□□□ 0.05
SYNE2-214ENST00000554928 SCN4AP35499 1836 aa15.38■□□□□ 0.05
SYNE2-214ENST00000554928 MS4A1P11836 297 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 IL1R1P14778 569 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 LMOD1P29536 600 aaPredicted RBP15.37■□□□□ 0.05
SYNE2-214ENST00000554928 ADORA1P30542 326 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 IL15P40933 162 aaPredicted RBP15.37■□□□□ 0.05
SYNE2-214ENST00000554928 BCAMP50895 628 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 TFCP2Q12800 502 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 PDE3AQ14432 1141 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 FBXO33Q7Z6M2 555 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 CERS5Q8N5B7 392 aa15.37■□□□□ 0.05
SYNE2-214ENST00000554928 ADAMTSL1Q8N6G6 1762 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 PUM3Q15397 648 aaKnown RBP15.36■□□□□ 0.05
SYNE2-214ENST00000554928 TBC1D10BQ4KMP7 808 aaPredicted RBP15.36■□□□□ 0.05
SYNE2-214ENST00000554928 TTLL5Q6EMB2 1281 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 ZNF804AQ7Z570 1209 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 SIRT2Q8IXJ6 389 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 DPF2Q92785 391 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 FBXO3Q9UK99 471 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 DDX19BQ9UMR2 479 aa15.36■□□□□ 0.05
SYNE2-214ENST00000554928 SASH1O94885 1247 aa15.35■□□□□ 0.05
SYNE2-214ENST00000554928 HIBADHP31937 336 aaKnown RBP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 FMR1Q06787 632 aaKnown RBP eCLIP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 RBM26Q5T8P6 1007 aaKnown RBP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 STRIP1Q5VSL9 837 aa15.35■□□□□ 0.05
SYNE2-214ENST00000554928 MAP1SQ66K74 1059 aaPredicted RBP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 CHADLQ6NUI6 762 aa15.35■□□□□ 0.05
SYNE2-214ENST00000554928 LDHDQ86WU2 507 aa15.35■□□□□ 0.05
SYNE2-214ENST00000554928 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 SMC1BQ8NDV3 1235 aa15.35■□□□□ 0.05
SYNE2-214ENST00000554928 TDRD7Q8NHU6 1098 aaKnown RBP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 ADARB2Q9NS39 739 aaKnown RBP15.35■□□□□ 0.05
SYNE2-214ENST00000554928 CEP126Q9P2H0 1117 aa15.35■□□□□ 0.05
SYNE2-214ENST00000554928 ASTN2O75129 1339 aaPredicted RBP15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms