RNA–Protein interactions for RNA: ENST00000554901.1

SPTLC2-203, Transcript of serine palmitoyltransferase long chain base subunit 2, humanhuman

TSL 1 (best)

Gene SPTLC2, Length 1,518 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTLC2-203ENST00000554901 IRS2Q9Y4H2 1338 aa20.23■□□□□ 0.83
SPTLC2-203ENST00000554901 APBB1O00213 710 aa20.22■□□□□ 0.83
SPTLC2-203ENST00000554901 CAVIN4Q5BKX8 364 aa20.22■□□□□ 0.83
SPTLC2-203ENST00000554901 ANKRD45Q5TZF3 282 aa20.22■□□□□ 0.83
SPTLC2-203ENST00000554901 IL1RAPL2Q9NP60 686 aa20.22■□□□□ 0.83
SPTLC2-203ENST00000554901 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP20.22■□□□□ 0.83
SPTLC2-203ENST00000554901 SNAP23O00161 211 aa20.21■□□□□ 0.83
SPTLC2-203ENST00000554901 ZBTB22O15209 634 aa20.21■□□□□ 0.83
SPTLC2-203ENST00000554901 IARSP41252 1262 aaKnown RBP20.21■□□□□ 0.83
SPTLC2-203ENST00000554901 TIMM10P62072 90 aa20.21■□□□□ 0.83
SPTLC2-203ENST00000554901 NUCB1Q02818 461 aa20.21■□□□□ 0.83
SPTLC2-203ENST00000554901 EAF2Q96CJ1 260 aaPredicted RBP20.21■□□□□ 0.83
SPTLC2-203ENST00000554901 WTIPA6NIX2 430 aaPredicted RBP20.2■□□□□ 0.82
SPTLC2-203ENST00000554901 PPIP5K2O43314 1243 aa20.2■□□□□ 0.82
SPTLC2-203ENST00000554901 LMNB1P20700 586 aa20.2■□□□□ 0.82
SPTLC2-203ENST00000554901 ZNF804AQ7Z570 1209 aa20.2■□□□□ 0.82
SPTLC2-203ENST00000554901 AACSQ86V21 672 aa20.2■□□□□ 0.82
SPTLC2-203ENST00000554901 NEUROD6Q96NK8 337 aa20.2■□□□□ 0.82
SPTLC2-203ENST00000554901 CHD1LQ86WJ1 897 aa20.19■□□□□ 0.82
SPTLC2-203ENST00000554901 XAGE2Q96GT9 111 aa20.19■□□□□ 0.82
SPTLC2-203ENST00000554901 COA1Q9GZY4 146 aa20.19■□□□□ 0.82
SPTLC2-203ENST00000554901 ZNF277Q9NRM2 450 aaPredicted RBP20.19■□□□□ 0.82
SPTLC2-203ENST00000554901 IFIT2P09913 472 aaKnown RBP20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 RASSF7Q02833 373 aa20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 B4GALNT3Q6L9W6 998 aa20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 FBXO33Q7Z6M2 555 aa20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 LARGE2Q8N3Y3 721 aa20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 ARAP2Q8WZ64 1704 aa20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 FAM84BQ96KN1 310 aaPredicted RBP20.18■□□□□ 0.82
SPTLC2-203ENST00000554901 SMARCA5O60264 1052 aaPredicted RBP20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 KLRK1P26718 216 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 HIBADHP31937 336 aaKnown RBP20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 AOC3Q16853 763 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 TXNRD3Q86VQ6 643 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 GPR101Q96P66 508 aaPredicted RBP20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 DBNLQ9UJU6 430 aaKnown RBP20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 RIMBP2O15034 1052 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 GORABQ5T7V8 394 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 PODNQ7Z5L7 613 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 VPS37DQ86XT2 251 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 JDP2Q8WYK2 163 aa20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 GNL3LQ9NVN8 582 aaKnown RBP20.17■□□□□ 0.82
SPTLC2-203ENST00000554901 G3V3G9 751 aa20.16■□□□□ 0.82
SPTLC2-203ENST00000554901 CCDC158Q5M9N0 1113 aa20.16■□□□□ 0.82
SPTLC2-203ENST00000554901 DCAF8Q5TAQ9 597 aa20.16■□□□□ 0.82
SPTLC2-203ENST00000554901 ZNF512BQ96KM6 892 aaPredicted RBP20.16■□□□□ 0.82
SPTLC2-203ENST00000554901 DBNDD2Q9BQY9 259 aa20.16■□□□□ 0.82
SPTLC2-203ENST00000554901 CCDC8Q9H0W5 538 aaPredicted RBP20.16■□□□□ 0.82
SPTLC2-203ENST00000554901 SEMA3EO15041 775 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 IL1R1P14778 569 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 ADORA1P30542 326 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 GYG1P46976 350 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 CCDC102BQ68D86 513 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 NIM1KQ8IY84 436 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 GPATCH3Q96I76 525 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 CD209Q9NNX6 404 aa20.15■□□□□ 0.82
SPTLC2-203ENST00000554901 UQCRFS1P1P0C7P4 283 aa20.14■□□□□ 0.81
SPTLC2-203ENST00000554901 BCAMP50895 628 aa20.14■□□□□ 0.81
SPTLC2-203ENST00000554901 PRELPP51888 382 aa20.14■□□□□ 0.81
SPTLC2-203ENST00000554901 LNPKQ9C0E8 428 aa20.14■□□□□ 0.81
SPTLC2-203ENST00000554901 ZC3H4Q9UPT8 1303 aaKnown RBP20.14■□□□□ 0.81
SPTLC2-203ENST00000554901 TDRD7Q8NHU6 1098 aaKnown RBP20.13■□□□□ 0.81
SPTLC2-203ENST00000554901 TLR7Q9NYK1 1049 aaKnown RBP20.13■□□□□ 0.81
SPTLC2-203ENST00000554901 ZNRF3Q9ULT6 936 aa20.13■□□□□ 0.81
SPTLC2-203ENST00000554901 ECE2O60344 883 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 ARID4AP29374 1257 aaPredicted RBP20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 PHKA1P46020 1223 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 GTF3C3Q9Y5Q9 886 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 TTC41PQ6P2S7 1318 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 SBF1O95248 1867 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 DOK7Q18PE1 504 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 TTC39AQ5SRH9 613 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 PPIL4Q8WUA2 492 aaKnown RBP eCLIP20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 DBNDD1Q9H9R9 158 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 ECHDC1Q9NTX5 307 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 RNF181Q9P0P0 153 aa20.12■□□□□ 0.81
SPTLC2-203ENST00000554901 PDS5AQ29RF7 1337 aaKnown RBP20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 SALL3Q9BXA9 1300 aa20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 FZD9O00144 591 aa20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 MX1P20591 662 aa20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 C9orf131Q5VYM1 1079 aa20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 STAP2Q9UGK3 403 aa20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 DENND2AQ9ULE3 1009 aa20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 DICER1Q9UPY3 1922 aaKnown RBP20.11■□□□□ 0.81
SPTLC2-203ENST00000554901 COL4A5P29400 1685 aa20.1■□□□□ 0.81
SPTLC2-203ENST00000554901 ATP5JP18859 108 aa20.1■□□□□ 0.81
SPTLC2-203ENST00000554901 C16orf71Q8IYS4 520 aaPredicted RBP20.1■□□□□ 0.81
SPTLC2-203ENST00000554901 ERC2O15083 957 aa20.09■□□□□ 0.81
SPTLC2-203ENST00000554901 FRAT2O75474 233 aaPredicted RBP20.09■□□□□ 0.81
SPTLC2-203ENST00000554901 BCL11AQ9H165 835 aa20.09■□□□□ 0.81
SPTLC2-203ENST00000554901 OSBPL3Q9H4L5 887 aa20.09■□□□□ 0.81
SPTLC2-203ENST00000554901 AOX1Q06278 1338 aa20.09■□□□□ 0.81
SPTLC2-203ENST00000554901 FAM205AQ6ZU69 1335 aa20.09■□□□□ 0.81
SPTLC2-203ENST00000554901 YDJCA8MPS7 323 aa20.08■□□□□ 0.81
SPTLC2-203ENST00000554901 EIF6P56537 245 aaKnown RBP20.08■□□□□ 0.81
SPTLC2-203ENST00000554901 STRIP1Q5VSL9 837 aa20.08■□□□□ 0.81
SPTLC2-203ENST00000554901 UTRNP46939 3433 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 CCDC88AQ3V6T2 1871 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 PDE1AP54750 535 aa20.07■□□□□ 0.8
SPTLC2-203ENST00000554901 RASGRF1Q13972 1273 aa20.07■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms