RNA–Protein interactions for RNA: ENST00000554685.2

SHOX2-206, Transcript of short stature homeobox 2, humanhuman

TSL 5

Gene SHOX2, Length 439 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-206ENST00000554685 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
SHOX2-206ENST00000554685 ZBTB22O15209 634 aa17.51■□□□□ 0.39
SHOX2-206ENST00000554685 DPEP1P16444 411 aa17.51■□□□□ 0.39
SHOX2-206ENST00000554685 TSHZ3Q63HK5 1081 aa17.51■□□□□ 0.39
SHOX2-206ENST00000554685 ARAP2Q8WZ64 1704 aa17.51■□□□□ 0.39
SHOX2-206ENST00000554685 GNL3LQ9NVN8 582 aaKnown RBP17.51■□□□□ 0.39
SHOX2-206ENST00000554685 NSFL1CQ9UNZ2 370 aaKnown RBP17.51■□□□□ 0.39
SHOX2-206ENST00000554685 GSPT1P15170 499 aaKnown RBP17.5■□□□□ 0.39
SHOX2-206ENST00000554685 ADORA1P30542 326 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 GPSM2P81274 684 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 SOGA3Q5TF21 947 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 C15orf52Q6ZUT6 534 aaKnown RBP17.5■□□□□ 0.39
SHOX2-206ENST00000554685 CNTROBQ8N137 903 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 MPNDQ8N594 471 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 PIM2Q9P1W9 311 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 PPP1R1BQ9UD71 204 aaPredicted RBP17.5■□□□□ 0.39
SHOX2-206ENST00000554685 A0A1B0GUL6 1792 aa17.5■□□□□ 0.39
SHOX2-206ENST00000554685 A0A0G2JLW4 131 aa17.49■□□□□ 0.39
SHOX2-206ENST00000554685 TRIM6-TRIM34B2RNG4 842 aa17.49■□□□□ 0.39
SHOX2-206ENST00000554685 UFL1O94874 794 aa17.49■□□□□ 0.39
SHOX2-206ENST00000554685 CCDC102BQ68D86 513 aa17.49■□□□□ 0.39
SHOX2-206ENST00000554685 DPP8Q6V1X1 898 aaPredicted RBP17.49■□□□□ 0.39
SHOX2-206ENST00000554685 VPS37DQ86XT2 251 aa17.49■□□□□ 0.39
SHOX2-206ENST00000554685 KLHL34Q8N239 644 aa17.49■□□□□ 0.39
SHOX2-206ENST00000554685 EIF5BO60841 1220 aaKnown RBP17.48■□□□□ 0.39
SHOX2-206ENST00000554685 ARID4AP29374 1257 aaPredicted RBP17.48■□□□□ 0.39
SHOX2-206ENST00000554685 CASC1Q6TDU7 716 aa17.48■□□□□ 0.39
SHOX2-206ENST00000554685 EVI5LQ96CN4 794 aa17.48■□□□□ 0.39
SHOX2-206ENST00000554685 EYA3Q99504 573 aa17.48■□□□□ 0.39
SHOX2-206ENST00000554685 HAUS7Q99871 368 aa17.48■□□□□ 0.39
SHOX2-206ENST00000554685 BOLA2Q9H3K6 86 aa17.48■□□□□ 0.39
SHOX2-206ENST00000554685 SNAP23O00161 211 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 SEMA3EO15041 775 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 SDSP20132 328 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 KCNA3P22001 575 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 CCDC93Q567U6 631 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 DALRD3Q5D0E6 543 aaKnown RBP17.47■□□□□ 0.39
SHOX2-206ENST00000554685 ZNF804AQ7Z570 1209 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 TICAM2Q86XR7 235 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 SUPT20HQ8NEM7 779 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 TBC1D16Q8TBP0 767 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 RILPL2Q969X0 211 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 MED23Q9ULK4 1368 aa17.47■□□□□ 0.39
SHOX2-206ENST00000554685 C6orf229H3BNL8 230 aa17.46■□□□□ 0.39
SHOX2-206ENST00000554685 CDC45O75419 566 aa17.46■□□□□ 0.39
SHOX2-206ENST00000554685 HIBADHP31937 336 aaKnown RBP17.46■□□□□ 0.39
SHOX2-206ENST00000554685 PHKA1P46020 1223 aa17.46■□□□□ 0.39
SHOX2-206ENST00000554685 RTKN2Q8IZC4 609 aa17.46■□□□□ 0.39
SHOX2-206ENST00000554685 C7orf43Q8WVR3 580 aa17.46■□□□□ 0.39
SHOX2-206ENST00000554685 TTF1Q15361 905 aaPredicted RBP17.45■□□□□ 0.38
SHOX2-206ENST00000554685 LRRFIP1Q32MZ4 808 aaKnown RBP17.45■□□□□ 0.38
SHOX2-206ENST00000554685 FBXO33Q7Z6M2 555 aa17.45■□□□□ 0.38
SHOX2-206ENST00000554685 FAM84BQ96KN1 310 aaPredicted RBP17.45■□□□□ 0.38
SHOX2-206ENST00000554685 DNAJC2Q99543 621 aaKnown RBP17.45■□□□□ 0.38
SHOX2-206ENST00000554685 KIAA1551Q9HCM1 1747 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 RFX7Q2KHR2 1363 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 HIP1O00291 1037 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 GYG1P46976 350 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 BCAMP50895 628 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 RTFDC1Q9BY42 306 aaPredicted RBP17.44■□□□□ 0.38
SHOX2-206ENST00000554685 ZC3H12CQ9C0D7 883 aaKnown RBP17.44■□□□□ 0.38
SHOX2-206ENST00000554685 PAG1Q9NWQ8 432 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 POLLQ9UGP5 575 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 DENND2AQ9ULE3 1009 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 SLX4Q8IY92 1834 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 PDS5AQ29RF7 1337 aaKnown RBP17.44■□□□□ 0.38
SHOX2-206ENST00000554685 IRS2Q9Y4H2 1338 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 LTBP1Q14766 1721 aa17.44■□□□□ 0.38
SHOX2-206ENST00000554685 C21orf2O43822 256 aa17.43■□□□□ 0.38
SHOX2-206ENST00000554685 FRAT2O75474 233 aaPredicted RBP17.43■□□□□ 0.38
SHOX2-206ENST00000554685 SPATA5Q8NB90 893 aa17.43■□□□□ 0.38
SHOX2-206ENST00000554685 MAP4K4O95819 1239 aaPredicted RBP17.42■□□□□ 0.38
SHOX2-206ENST00000554685 MCAMP43121 646 aa17.42■□□□□ 0.38
SHOX2-206ENST00000554685 FKBP4Q02790 459 aaKnown RBP eCLIP17.42■□□□□ 0.38
SHOX2-206ENST00000554685 PSMD1Q99460 953 aa17.42■□□□□ 0.38
SHOX2-206ENST00000554685 FSD1Q9BTV5 496 aa17.42■□□□□ 0.38
SHOX2-206ENST00000554685 ZNF219Q9P2Y4 722 aaPredicted RBP17.42■□□□□ 0.38
SHOX2-206ENST00000554685 CACNA1SQ13698 1873 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 GOLIM4O00461 696 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 IGSF3O75054 1194 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 KLRK1P26718 216 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 ZAP70P43403 619 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 RASGRF1Q13972 1273 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 WASHC4Q2M389 1173 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 C8orf34Q49A92 452 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 KBTBD3Q8NAB2 608 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 COA1Q9GZY4 146 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 VPS33BQ9H267 617 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 HMG20BQ9P0W2 317 aa17.41■□□□□ 0.38
SHOX2-206ENST00000554685 DUOX1Q9NRD9 1551 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 SNED1Q8TER0 1413 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 WTIPA6NIX2 430 aaPredicted RBP17.4■□□□□ 0.38
SHOX2-206ENST00000554685 G3V3G9 751 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 SCARF1Q14162 830 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 DCAF8Q5TAQ9 597 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 OLFM4Q6UX06 510 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 SLC51AQ86UW1 340 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 RUFY2Q8WXA3 655 aa17.4■□□□□ 0.38
SHOX2-206ENST00000554685 FHDC1Q9C0D6 1143 aaPredicted RBP17.4■□□□□ 0.38
SHOX2-206ENST00000554685 DDX24Q9GZR7 859 aaKnown RBP eCLIP17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms