RNA–Protein interactions for RNA: ENST00000554659.5

VTI1B-204, Transcript of vesicle transport through interaction with t-SNAREs 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VTI1B, Length 5,351 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1B-204ENST00000554659 FEZ1Q99689 392 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 TUBBP07437 444 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 ARHGAP30Q7Z6I6 1101 aaPredicted RBP15.87■□□□□ 0.13
VTI1B-204ENST00000554659 DDX12PQ92771 950 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 SPAG5Q96R06 1193 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 PTPDC1A2A3K4 754 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 ZBTB7BO15156 539 aaPredicted RBP15.87■□□□□ 0.13
VTI1B-204ENST00000554659 CCDC152Q4G0S7 254 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 HSP90AA4PQ58FG1 418 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 DHX32Q7L7V1 743 aaKnown RBP15.87■□□□□ 0.13
VTI1B-204ENST00000554659 VAT1LQ9HCJ6 419 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 SLC4A4Q9Y6R1 1079 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 PLCH2O75038 1416 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 PER1O15534 1290 aaPredicted RBP15.87■□□□□ 0.13
VTI1B-204ENST00000554659 KRT86O43790 486 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 TBCAO75347 108 aaKnown RBP15.87■□□□□ 0.13
VTI1B-204ENST00000554659 GSTO1P78417 241 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 COL17A1Q9UMD9 1497 aaPredicted RBP15.87■□□□□ 0.13
VTI1B-204ENST00000554659 ZMYM4Q5VZL5 1548 aa15.87■□□□□ 0.13
VTI1B-204ENST00000554659 RNF113AO15541 343 aaKnown RBP15.86■□□□□ 0.13
VTI1B-204ENST00000554659 CCDC155Q8N6L0 562 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 ERMNQ8TAM6 284 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 PLVAPQ9BX97 442 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 MTHFSDQ2M296 383 aaKnown RBP15.86■□□□□ 0.13
VTI1B-204ENST00000554659 SELENOOQ9BVL4 669 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 EXOC5O00471 708 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 PA2G4Q9UQ80 394 aaKnown RBP15.86■□□□□ 0.13
VTI1B-204ENST00000554659 BICRAQ9NZM4 1560 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 FLT4P35916 1363 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 NPC1L1Q9UHC9 1359 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 OGFRQ9NZT2 677 aa15.86■□□□□ 0.13
VTI1B-204ENST00000554659 CALM1P0DP23 149 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 CALM2P0DP24 149 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 CALM3P0DP25 149 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 SLC9C2Q5TAH2 1124 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 SYCP3Q8IZU3 236 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 IFNKQ9P0W0 207 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 INSRP06213 1382 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 CYP7A1P22680 504 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 DHX58Q96C10 678 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 PPP1R1BQ9UD71 204 aaPredicted RBP15.85■□□□□ 0.13
VTI1B-204ENST00000554659 NOL12Q9UGY1 213 aaKnown RBP eCLIP15.85■□□□□ 0.13
VTI1B-204ENST00000554659 V9GYY5 206 aaPredicted RBP15.85■□□□□ 0.13
VTI1B-204ENST00000554659 RTL9Q8NET4 1388 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 TBC1D5Q92609 795 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 CARD14Q9BXL6 1004 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 KIF5AQ12840 1032 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 RBSNQ9H1K0 784 aa15.85■□□□□ 0.13
VTI1B-204ENST00000554659 APOBRQ0VD83 1088 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 SYCP2Q9BX26 1530 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 HLA-DOAP06340 250 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 GNAT2P19087 354 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 PRPHP41219 470 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 ATRIPQ8WXE1 791 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 MSH6P52701 1360 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 CCDC6Q16204 474 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 NSRP1Q9H0G5 558 aaKnown RBP15.84■□□□□ 0.13
VTI1B-204ENST00000554659 STX8Q9UNK0 236 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 SYT10Q6XYQ8 523 aa15.84■□□□□ 0.13
VTI1B-204ENST00000554659 NUP153P49790 1475 aaKnown RBP15.84■□□□□ 0.13
VTI1B-204ENST00000554659 CALML3P27482 149 aa15.83■□□□□ 0.13
VTI1B-204ENST00000554659 UHRF1BP1Q6BDS2 1440 aa15.83■□□□□ 0.13
VTI1B-204ENST00000554659 MAP3K5Q99683 1374 aa15.83■□□□□ 0.13
VTI1B-204ENST00000554659 TSPY3P0CV98 308 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 TSPY8P0CW00 308 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 CAPN2P17655 700 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 ZNF445P59923 1031 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 ASIC1P78348 528 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 FAM160A1Q05DH4 1040 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 RASAL2Q9UJF2 1139 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 NPATQ14207 1427 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 CFAP43Q8NDM7 1665 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 AOX1Q06278 1338 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 ATP10BO94823 1461 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 BICDL2A1A5D9 508 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 SCLT1Q96NL6 688 aa15.83■□□□□ 0.12
VTI1B-204ENST00000554659 SF3B2Q13435 895 aaKnown RBP15.82■□□□□ 0.12
VTI1B-204ENST00000554659 MYL5Q02045 173 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 ERO1AQ96HE7 468 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 SHANK2Q9UPX8 1470 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 PPP1R14CQ8TAE6 165 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 LMBR1Q8WVP7 490 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 CCDC42Q96M95 316 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 TNRQ92752 1358 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 RNF123Q5XPI4 1314 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 PHACTR3Q96KR7 559 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 A2MP01023 1474 aa15.82■□□□□ 0.12
VTI1B-204ENST00000554659 KRT2P35908 639 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 COMMD10Q9Y6G5 202 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 ELP1O95163 1332 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 A0A1W2PRG0 241 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 CNGA4Q8IV77 575 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 STMN4Q9H169 189 aaPredicted RBP15.81■□□□□ 0.12
VTI1B-204ENST00000554659 CABP5Q9NP86 173 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 A0A1W2PP64 1363 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 HEATR3Q7Z4Q2 680 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 IKBKGQ9Y6K9 419 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 ABCC1P33527 1531 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 C6orf229H3BNL8 230 aa15.81■□□□□ 0.12
VTI1B-204ENST00000554659 TRAF1Q13077 416 aa15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 96.6 ms