RNA–Protein interactions for RNA: ENST00000554592.5

ATXN3-228, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,010 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-228ENST00000554592 SVOPQ8N4V2 548 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 GAS2L2Q8NHY3 880 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 C2orf49Q9BVC5 232 aaPredicted RBP7.4□□□□□ -1.22
ATXN3-228ENST00000554592 TRAIPQ9BWF2 469 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 PHF24Q9UPV7 400 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 TRPM2O94759 1503 aa7.4□□□□□ -1.22
ATXN3-228ENST00000554592 TMEM131LA2VDJ0 1609 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 SETBP1Q9Y6X0 1596 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 ADGRL2O95490 1459 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 C1orf167Q5SNV9 1468 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 ADGRL3Q9HAR2 1447 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 EFSO43281 561 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 LGR5O75473 907 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 MAPTP10636 758 aaKnown RBP7.39□□□□□ -1.23
ATXN3-228ENST00000554592 FGFR3P22607 806 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 TRIM26Q12899 539 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-228ENST00000554592 UNC5CLQ8IV45 518 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 SCG3Q8WXD2 468 aaKnown RBP7.39□□□□□ -1.23
ATXN3-228ENST00000554592 ZNF232Q9UNY5 417 aa7.39□□□□□ -1.23
ATXN3-228ENST00000554592 RBM19Q9Y4C8 960 aaKnown RBP7.39□□□□□ -1.23
ATXN3-228ENST00000554592 GPC6Q9Y625 555 aaPredicted RBP7.39□□□□□ -1.23
ATXN3-228ENST00000554592 PTPN23Q9H3S7 1636 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 NUP155O75694 1391 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 NPHP3Q7Z494 1330 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 PPP1R12BO60237 982 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-228ENST00000554592 FAM157BP0CG42 384 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 MAP2K3P46734 347 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 C1orf229Q6ZS94 237 aaPredicted RBP7.38□□□□□ -1.23
ATXN3-228ENST00000554592 DEFB132Q7Z7B7 95 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 LRRC4BQ9NT99 713 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 ZMIZ1Q9ULJ6 1067 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 HCN4Q9Y3Q4 1203 aa7.38□□□□□ -1.23
ATXN3-228ENST00000554592 BCL9LQ86UU0 1499 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 BLMP54132 1417 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-228ENST00000554592 ATG7O95352 703 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 BCRP11274 1271 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 IGFBP4P22692 258 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 WEE1P30291 646 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 ELOAQ14241 798 aaKnown RBP7.37□□□□□ -1.23
ATXN3-228ENST00000554592 FAM182BQ5T319 152 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 BICDL1Q6ZP65 573 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 HINFPQ9BQA5 517 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 OXCT2Q9BYC2 517 aaPredicted RBP7.37□□□□□ -1.23
ATXN3-228ENST00000554592 PHACTR1Q9C0D0 580 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 STRN4Q9NRL3 753 aa7.37□□□□□ -1.23
ATXN3-228ENST00000554592 NSFL1CQ9UNZ2 370 aaKnown RBP7.37□□□□□ -1.23
ATXN3-228ENST00000554592 DCDC2BA2VCK2 349 aa7.36□□□□□ -1.23
ATXN3-228ENST00000554592 FOXO3O43524 673 aa7.36□□□□□ -1.23
ATXN3-228ENST00000554592 LRRC69Q6ZNQ3 347 aa7.36□□□□□ -1.23
ATXN3-228ENST00000554592 ALDH16A1Q8IZ83 802 aa7.36□□□□□ -1.23
ATXN3-228ENST00000554592 NOVA2Q9UNW9 492 aaKnown RBP7.36□□□□□ -1.23
ATXN3-228ENST00000554592 LRPPRCP42704 1394 aaKnown RBP7.35□□□□□ -1.23
ATXN3-228ENST00000554592 CARNS1A5YM72 827 aa7.35□□□□□ -1.23
ATXN3-228ENST00000554592 KHNYNO15037 678 aaKnown RBP7.35□□□□□ -1.23
ATXN3-228ENST00000554592 OIP5O43482 229 aa7.35□□□□□ -1.23
ATXN3-228ENST00000554592 ZNF280CQ8ND82 737 aa7.35□□□□□ -1.23
ATXN3-228ENST00000554592 FAM200AQ8TCP9 573 aa7.35□□□□□ -1.23
ATXN3-228ENST00000554592 RHPN1Q8TCX5 695 aa7.35□□□□□ -1.23
ATXN3-228ENST00000554592 KLF15Q9UIH9 416 aa7.35□□□□□ -1.23
ATXN3-228ENST00000554592 ROBO2Q9HCK4 1378 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 BMP4P12644 408 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 CD33P20138 364 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 BAG6P46379 1132 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 XPCQ01831 940 aaPredicted RBP7.34□□□□□ -1.23
ATXN3-228ENST00000554592 KCNMA1Q12791 1236 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 LAMC2Q13753 1193 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 VPS72Q15906 364 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 KRT27Q7Z3Y8 459 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 CHMP3Q9Y3E7 222 aa7.34□□□□□ -1.23
ATXN3-228ENST00000554592 NHSL1Q5SYE7 1610 aa7.34□□□□□ -1.24
ATXN3-228ENST00000554592 ROCK1Q13464 1354 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 MYOM2P54296 1465 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 SHISA8B8ZZ34 492 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 GRIN2CQ14957 1233 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 HSH2DQ96JZ2 352 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 SUSD3Q96L08 255 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 USTQ9Y2C2 406 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 GJA3Q9Y6H8 435 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 UNC13BO14795 1591 aa7.33□□□□□ -1.24
ATXN3-228ENST00000554592 RPGRIP1LQ68CZ1 1315 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 CROCC2H7BZ55 1655 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 RALGAPBQ86X10 1494 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 LOC100996750A0A140TA64 210 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 TMEM88BA6NKF7 163 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 ARAFP10398 606 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 HOXB4P17483 251 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-228ENST00000554592 MAP3K10Q02779 954 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 PDE4CQ08493 712 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 KCTD17Q8N5Z5 321 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 STK32AQ8WU08 396 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 KRTAP4-6Q9BYQ5 205 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 MARK1Q9P0L2 795 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 GGA1Q9UJY5 639 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 GDF2Q9UK05 429 aaPredicted RBP7.32□□□□□ -1.24
ATXN3-228ENST00000554592 BCS1LQ9Y276 419 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 CCDC9Q9Y3X0 531 aaKnown RBP7.32□□□□□ -1.24
ATXN3-228ENST00000554592 HFM1A2PYH4 1435 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 GCC2Q8IWJ2 1684 aa7.32□□□□□ -1.24
ATXN3-228ENST00000554592 SPATA31A3Q5VYP0 1347 aa7.31□□□□□ -1.24
ATXN3-228ENST00000554592 KCNQ4P56696 695 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms