RNA–Protein interactions for RNA: ENST00000554026.5

IFT43-206, Transcript of intraflagellar transport 43, humanhuman

TSL 2

Gene IFT43, Length 1,102 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT43-206ENST00000554026 NOP58Q9Y2X3 529 aaKnown RBP13.96□□□□□ -0.17
IFT43-206ENST00000554026 RIMBP2O15034 1052 aa13.95□□□□□ -0.18
IFT43-206ENST00000554026 TAF5LO75529 589 aa13.95□□□□□ -0.18
IFT43-206ENST00000554026 OS9Q13438 667 aaPredicted RBP13.95□□□□□ -0.18
IFT43-206ENST00000554026 CAVIN4Q5BKX8 364 aa13.95□□□□□ -0.18
IFT43-206ENST00000554026 GPC2Q8N158 579 aa13.95□□□□□ -0.18
IFT43-206ENST00000554026 HELBQ8NG08 1087 aaPredicted RBP13.95□□□□□ -0.18
IFT43-206ENST00000554026 A0A1B0GUL6 1792 aa13.94□□□□□ -0.18
IFT43-206ENST00000554026 SURF6O75683 361 aaKnown RBP13.94□□□□□ -0.18
IFT43-206ENST00000554026 SLC5A1P13866 664 aa13.94□□□□□ -0.18
IFT43-206ENST00000554026 SLC51AQ86UW1 340 aa13.94□□□□□ -0.18
IFT43-206ENST00000554026 VGLL2Q8N8G2 317 aa13.94□□□□□ -0.18
IFT43-206ENST00000554026 LPIN2Q92539 896 aa13.94□□□□□ -0.18
IFT43-206ENST00000554026 PA2G4Q9UQ80 394 aaKnown RBP13.94□□□□□ -0.18
IFT43-206ENST00000554026 ECE2O60344 883 aa13.93□□□□□ -0.18
IFT43-206ENST00000554026 CIAPIN1Q6FI81 312 aa13.93□□□□□ -0.18
IFT43-206ENST00000554026 VPS37DQ86XT2 251 aa13.93□□□□□ -0.18
IFT43-206ENST00000554026 CRBNQ96SW2 442 aa13.93□□□□□ -0.18
IFT43-206ENST00000554026 GPR108Q9NPR9 543 aa13.93□□□□□ -0.18
IFT43-206ENST00000554026 IQCA1LA6NCM1 817 aa13.92□□□□□ -0.18
IFT43-206ENST00000554026 RAB11FIP3O75154 756 aa13.92□□□□□ -0.18
IFT43-206ENST00000554026 HIBADHP31937 336 aaKnown RBP13.92□□□□□ -0.18
IFT43-206ENST00000554026 ATP2B3Q16720 1220 aa13.92□□□□□ -0.18
IFT43-206ENST00000554026 C16orf71Q8IYS4 520 aaPredicted RBP13.92□□□□□ -0.18
IFT43-206ENST00000554026 DBNDD1Q9H9R9 158 aa13.92□□□□□ -0.18
IFT43-206ENST00000554026 FGFR2P21802 821 aa13.91□□□□□ -0.18
IFT43-206ENST00000554026 RPS12P25398 132 aaKnown RBP13.91□□□□□ -0.18
IFT43-206ENST00000554026 MMP14P50281 582 aa13.91□□□□□ -0.18
IFT43-206ENST00000554026 CXCL9Q07325 125 aa13.91□□□□□ -0.18
IFT43-206ENST00000554026 DOK7Q18PE1 504 aa13.91□□□□□ -0.18
IFT43-206ENST00000554026 RBM46Q8TBY0 533 aaKnown RBP13.91□□□□□ -0.18
IFT43-206ENST00000554026 L3MBTL3Q96JM7 780 aaPredicted RBP13.91□□□□□ -0.18
IFT43-206ENST00000554026 GPR101Q96P66 508 aaPredicted RBP13.91□□□□□ -0.18
IFT43-206ENST00000554026 GNL3LQ9NVN8 582 aaKnown RBP13.91□□□□□ -0.18
IFT43-206ENST00000554026 MYO3BQ8WXR4 1341 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 IRS2Q9Y4H2 1338 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 USP17L3A6NCW0 530 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 USP17L4A6NCW7 530 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 ZBTB22O15209 634 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 IL1R1P14778 569 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 VEGFAP15692 232 aaPredicted RBP13.9□□□□□ -0.18
IFT43-206ENST00000554026 LMOD1P29536 600 aaPredicted RBP13.9□□□□□ -0.18
IFT43-206ENST00000554026 TFCP2Q12800 502 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 STRIP1Q5VSL9 837 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 USP17L1Q7RTZ2 530 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 KIF1BPQ96EK5 621 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 CD209Q9NNX6 404 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 GJA3Q9Y6H8 435 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 COL4A5P29400 1685 aa13.9□□□□□ -0.18
IFT43-206ENST00000554026 ZNF541Q9H0D2 1346 aa13.9□□□□□ -0.19
IFT43-206ENST00000554026 YDJCA8MPS7 323 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 RAD17O75943 681 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 DDNO94850 711 aaPredicted RBP13.89□□□□□ -0.19
IFT43-206ENST00000554026 VIL1P09327 827 aaKnown RBP13.89□□□□□ -0.19
IFT43-206ENST00000554026 FBXO33Q7Z6M2 555 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 TXNRD3Q86VQ6 643 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 SIRT2Q8IXJ6 389 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 DPF2Q92785 391 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 FAM84BQ96KN1 310 aaPredicted RBP13.89□□□□□ -0.19
IFT43-206ENST00000554026 ZNF609O15014 1411 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 PCNTO95613 3336 aa13.89□□□□□ -0.19
IFT43-206ENST00000554026 A0A1B0GUL7 405 aa13.88□□□□□ -0.19
IFT43-206ENST00000554026 WTIPA6NIX2 430 aaPredicted RBP13.88□□□□□ -0.19
IFT43-206ENST00000554026 SNAP23O00161 211 aa13.88□□□□□ -0.19
IFT43-206ENST00000554026 SEMA3EO15041 775 aa13.88□□□□□ -0.19
IFT43-206ENST00000554026 FRAT2O75474 233 aaPredicted RBP13.88□□□□□ -0.19
IFT43-206ENST00000554026 SASH1O94885 1247 aa13.88□□□□□ -0.19
IFT43-206ENST00000554026 FKBP1AP62942 108 aaKnown RBP13.88□□□□□ -0.19
IFT43-206ENST00000554026 GORABQ5T7V8 394 aa13.88□□□□□ -0.19
IFT43-206ENST00000554026 AGBL3Q8NEM8 1001 aa13.88□□□□□ -0.19
IFT43-206ENST00000554026 TDRD7Q8NHU6 1098 aaKnown RBP13.88□□□□□ -0.19
IFT43-206ENST00000554026 SCN4AP35499 1836 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 PSMD14O00487 310 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 KLRK1P26718 216 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 GYG1P46976 350 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 FSTL1Q12841 308 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 TTLL5Q6EMB2 1281 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 RSBN1LQ6PCB5 846 aaPredicted RBP13.87□□□□□ -0.19
IFT43-206ENST00000554026 PNMA8AQ86V59 439 aaPredicted RBP13.87□□□□□ -0.19
IFT43-206ENST00000554026 CLASRPQ8N2M8 674 aaKnown RBP13.87□□□□□ -0.19
IFT43-206ENST00000554026 DNAJC5GQ8N7S2 189 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 TBC1D22AQ8WUA7 517 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 NEUROD6Q96NK8 337 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 HACL1Q9UJ83 578 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 EXOC6BQ9Y2D4 811 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 PSME4Q14997 1843 aa13.87□□□□□ -0.19
IFT43-206ENST00000554026 H7C1D1 291 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 HDAC1Q13547 482 aaPredicted RBP13.86□□□□□ -0.19
IFT43-206ENST00000554026 TNNI3KQ59H18 835 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 RHPN1Q8TCX5 695 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 RWDD1Q9H446 243 aaPredicted RBP13.86□□□□□ -0.19
IFT43-206ENST00000554026 DCTPP1Q9H773 170 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 RRAGCQ9HB90 399 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 GPRC5DQ9NZD1 345 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 PCDHB15Q9Y5E8 787 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 FPGT-TNNI3KV9GXZ4 949 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 FAM205AQ6ZU69 1335 aa13.86□□□□□ -0.19
IFT43-206ENST00000554026 ARAP2Q8WZ64 1704 aa13.85□□□□□ -0.19
IFT43-206ENST00000554026 GMPSP49915 693 aaPredicted RBP13.85□□□□□ -0.19
IFT43-206ENST00000554026 BCAMP50895 628 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 44.2 ms