RNA–Protein interactions for RNA: ENST00000553866.1

CHGA-203, Transcript of chromogranin A, humanhuman

TSL 3

Gene CHGA, Length 889 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHGA-203ENST00000553866 LRRC24Q50LG9 513 aa15.85■□□□□ 0.13
CHGA-203ENST00000553866 INTS3Q68E01 1043 aaKnown RBP15.85■□□□□ 0.13
CHGA-203ENST00000553866 USP50Q70EL3 339 aaPredicted RBP15.85■□□□□ 0.13
CHGA-203ENST00000553866 CNNM1Q9NRU3 951 aa15.85■□□□□ 0.13
CHGA-203ENST00000553866 RIPOR2Q9Y4F9 1068 aa15.85■□□□□ 0.13
CHGA-203ENST00000553866 PASKQ96RG2 1323 aa15.85■□□□□ 0.13
CHGA-203ENST00000553866 ATF7IPQ6VMQ6 1270 aa15.84■□□□□ 0.13
CHGA-203ENST00000553866 SAMD7Q7Z3H4 446 aa15.84■□□□□ 0.13
CHGA-203ENST00000553866 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
CHGA-203ENST00000553866 CNTROBQ8N137 903 aa15.84■□□□□ 0.13
CHGA-203ENST00000553866 DPF2Q92785 391 aa15.84■□□□□ 0.13
CHGA-203ENST00000553866 GMLQ99445 158 aa15.84■□□□□ 0.13
CHGA-203ENST00000553866 UBTFL1P0CB47 393 aaPredicted RBP15.83■□□□□ 0.12
CHGA-203ENST00000553866 KCNJ4P48050 445 aa15.83■□□□□ 0.12
CHGA-203ENST00000553866 RSBN1LQ6PCB5 846 aaPredicted RBP15.83■□□□□ 0.12
CHGA-203ENST00000553866 COA1Q9GZY4 146 aa15.83■□□□□ 0.12
CHGA-203ENST00000553866 LRRFIP2Q9Y608 721 aaKnown RBP15.83■□□□□ 0.12
CHGA-203ENST00000553866 USP17L3A6NCW0 530 aa15.82■□□□□ 0.12
CHGA-203ENST00000553866 USP17L4A6NCW7 530 aa15.82■□□□□ 0.12
CHGA-203ENST00000553866 TRAF5O00463 557 aa15.82■□□□□ 0.12
CHGA-203ENST00000553866 RPS12P25398 132 aaKnown RBP15.82■□□□□ 0.12
CHGA-203ENST00000553866 TBC1D10BQ4KMP7 808 aaPredicted RBP15.82■□□□□ 0.12
CHGA-203ENST00000553866 DACT2Q5SW24 774 aa15.82■□□□□ 0.12
CHGA-203ENST00000553866 C15orf52Q6ZUT6 534 aaKnown RBP15.82■□□□□ 0.12
CHGA-203ENST00000553866 USP17L1Q7RTZ2 530 aa15.82■□□□□ 0.12
CHGA-203ENST00000553866 H7C1D1 291 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 IPO8O15397 1037 aaKnown RBP15.81■□□□□ 0.12
CHGA-203ENST00000553866 RLBP1P12271 317 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 PTPN12Q05209 780 aaKnown RBP15.81■□□□□ 0.12
CHGA-203ENST00000553866 RBM26Q5T8P6 1007 aaKnown RBP15.81■□□□□ 0.12
CHGA-203ENST00000553866 DLK2Q6UY11 383 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 TMEM57Q8N5G2 664 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 FBXW7Q969H0 707 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 CD209Q9NNX6 404 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 PGAP2Q9UHJ9 254 aa15.81■□□□□ 0.12
CHGA-203ENST00000553866 ZNF609O15014 1411 aa15.8■□□□□ 0.12
CHGA-203ENST00000553866 ASTN2O75129 1339 aaPredicted RBP15.8■□□□□ 0.12
CHGA-203ENST00000553866 ZKSCAN2Q63HK3 967 aa15.8■□□□□ 0.12
CHGA-203ENST00000553866 VGLL2Q8N8G2 317 aa15.8■□□□□ 0.12
CHGA-203ENST00000553866 GYG1P46976 350 aa15.79■□□□□ 0.12
CHGA-203ENST00000553866 GTF2IP78347 998 aa15.79■□□□□ 0.12
CHGA-203ENST00000553866 ATG9AQ7Z3C6 839 aa15.79■□□□□ 0.12
CHGA-203ENST00000553866 AGBL3Q8NEM8 1001 aa15.79■□□□□ 0.12
CHGA-203ENST00000553866 GLIS2Q9BZE0 524 aaPredicted RBP15.79■□□□□ 0.12
CHGA-203ENST00000553866 PA2G4Q9UQ80 394 aaKnown RBP15.79■□□□□ 0.12
CHGA-203ENST00000553866 POLR2AP24928 1970 aaKnown RBP15.78■□□□□ 0.12
CHGA-203ENST00000553866 MROH5Q6ZUA9 1318 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 IL1R1P14778 569 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 ZNF280AP59817 542 aaPredicted RBP15.78■□□□□ 0.12
CHGA-203ENST00000553866 UBE4AQ14139 1066 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 KIF4BQ2VIQ3 1234 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 METTL24Q5JXM2 366 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 STRIP1Q5VSL9 837 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 TTLL5Q6EMB2 1281 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 CERS5Q8N5B7 392 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 SIL1Q9H173 461 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 JAG2Q9Y219 1238 aa15.78■□□□□ 0.12
CHGA-203ENST00000553866 EYA2O00167 538 aa15.77■□□□□ 0.12
CHGA-203ENST00000553866 GNAI3P08754 354 aa15.77■□□□□ 0.12
CHGA-203ENST00000553866 CST9Q5W186 159 aa15.77■□□□□ 0.12
CHGA-203ENST00000553866 KLRG1Q96E93 195 aa15.77■□□□□ 0.12
CHGA-203ENST00000553866 FAM84BQ96KN1 310 aaPredicted RBP15.77■□□□□ 0.12
CHGA-203ENST00000553866 CREBZFQ9NS37 354 aa15.77■□□□□ 0.12
CHGA-203ENST00000553866 TMEM88BA6NKF7 163 aa15.76■□□□□ 0.11
CHGA-203ENST00000553866 PDE8BO95263 885 aa15.76■□□□□ 0.11
CHGA-203ENST00000553866 USP17L8P0C7I0 530 aa15.76■□□□□ 0.11
CHGA-203ENST00000553866 ZC3H15Q8WU90 426 aaKnown RBP15.76■□□□□ 0.11
CHGA-203ENST00000553866 SCAF8Q9UPN6 1271 aaKnown RBP15.76■□□□□ 0.11
CHGA-203ENST00000553866 TRPM7Q96QT4 1865 aa15.76■□□□□ 0.11
CHGA-203ENST00000553866 FGFR2P21802 821 aa15.75■□□□□ 0.11
CHGA-203ENST00000553866 ZNF804AQ7Z570 1209 aa15.75■□□□□ 0.11
CHGA-203ENST00000553866 USP48Q86UV5 1035 aa15.75■□□□□ 0.11
CHGA-203ENST00000553866 DZIP1LQ8IYY4 767 aaKnown RBP15.75■□□□□ 0.11
CHGA-203ENST00000553866 TDRD7Q8NHU6 1098 aaKnown RBP15.75■□□□□ 0.11
CHGA-203ENST00000553866 MYOZ2Q9NPC6 264 aa15.75■□□□□ 0.11
CHGA-203ENST00000553866 MKRN1Q9UHC7 482 aaKnown RBP15.75■□□□□ 0.11
CHGA-203ENST00000553866 PCNTO95613 3336 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 ADM5C9JUS6 153 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 HIBADHP31937 336 aaKnown RBP15.74■□□□□ 0.11
CHGA-203ENST00000553866 SCARF1Q14162 830 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 FBXO33Q7Z6M2 555 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 KIAA0825Q8IV33 1275 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 PANK1Q8TE04 598 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 GGA3Q9NZ52 723 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 IQSEC3Q9UPP2 1182 aaPredicted RBP15.74■□□□□ 0.11
CHGA-203ENST00000553866 PCDHAC2Q9Y5I4 1007 aa15.74■□□□□ 0.11
CHGA-203ENST00000553866 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP15.74■□□□□ 0.11
CHGA-203ENST00000553866 PNMA6EA0A0J9YXQ4 647 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 SRGAP3O43295 1099 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 GNAI2P04899 355 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 BCAMP50895 628 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 MTX1Q13505 466 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 NBPF9Q3BBW0 867 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 CDC37L1Q7L3B6 337 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 C1orf115Q9H7X2 142 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 COPRSQ9NQ92 184 aa15.73■□□□□ 0.11
CHGA-203ENST00000553866 ZBTB7BO15156 539 aaPredicted RBP15.72■□□□□ 0.11
CHGA-203ENST00000553866 CIAO1O76071 339 aa15.72■□□□□ 0.11
CHGA-203ENST00000553866 SASH1O94885 1247 aa15.72■□□□□ 0.11
CHGA-203ENST00000553866 GRIK5Q16478 980 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms