RNA–Protein interactions for RNA: ENST00000553830.1

PRKCH-206, Transcript of protein kinase C eta, humanhuman

TSL 5

Gene PRKCH, Length 514 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-206ENST00000553830 MAP4K4O95819 1239 aaPredicted RBP17.27■□□□□ 0.36
PRKCH-206ENST00000553830 ATP2B4P23634 1241 aa17.27■□□□□ 0.36
PRKCH-206ENST00000553830 UBE4AQ14139 1066 aa17.27■□□□□ 0.36
PRKCH-206ENST00000553830 DALRD3Q5D0E6 543 aaKnown RBP17.27■□□□□ 0.36
PRKCH-206ENST00000553830 DPP8Q6V1X1 898 aaPredicted RBP17.27■□□□□ 0.36
PRKCH-206ENST00000553830 ECHDC1Q9NTX5 307 aa17.27■□□□□ 0.36
PRKCH-206ENST00000553830 BCS1LQ9Y276 419 aa17.27■□□□□ 0.36
PRKCH-206ENST00000553830 GYG1P46976 350 aa17.26■□□□□ 0.35
PRKCH-206ENST00000553830 BOLA2Q9H3K6 86 aa17.26■□□□□ 0.35
PRKCH-206ENST00000553830 DUOX1Q9NRD9 1551 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 RIMBP2O15034 1052 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 PHKA1P46020 1223 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 BCAMP50895 628 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 CCDC158Q5M9N0 1113 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 TTC22Q5TAA0 569 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 VPS37DQ86XT2 251 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 TBC1D16Q8TBP0 767 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 POLLQ9UGP5 575 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 IQSEC3Q9UPP2 1182 aaPredicted RBP17.25■□□□□ 0.35
PRKCH-206ENST00000553830 LEMD3Q9Y2U8 911 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 ARFGEF1Q9Y6D6 1849 aa17.25■□□□□ 0.35
PRKCH-206ENST00000553830 TTC41PQ6P2S7 1318 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 AKAP11Q9UKA4 1901 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 TRIM6-TRIM34B2RNG4 842 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 ERC2O15083 957 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 CCDC93Q567U6 631 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 PELP1Q8IZL8 1130 aaKnown RBP17.24■□□□□ 0.35
PRKCH-206ENST00000553830 DNAJC2Q99543 621 aaKnown RBP17.24■□□□□ 0.35
PRKCH-206ENST00000553830 SNRKQ9NRH2 765 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 STAP2Q9UGK3 403 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 NDUFB9Q9Y6M9 179 aa17.24■□□□□ 0.35
PRKCH-206ENST00000553830 MYO5AQ9Y4I1 1855 aaKnown RBP17.23■□□□□ 0.35
PRKCH-206ENST00000553830 CAVIN4Q5BKX8 364 aa17.23■□□□□ 0.35
PRKCH-206ENST00000553830 CCDC102BQ68D86 513 aa17.23■□□□□ 0.35
PRKCH-206ENST00000553830 TXNRD3Q86VQ6 643 aa17.23■□□□□ 0.35
PRKCH-206ENST00000553830 PI4K2BQ8TCG2 481 aa17.23■□□□□ 0.35
PRKCH-206ENST00000553830 C7orf43Q8WVR3 580 aa17.23■□□□□ 0.35
PRKCH-206ENST00000553830 PODXL2Q9NZ53 605 aa17.23■□□□□ 0.35
PRKCH-206ENST00000553830 AOX1Q06278 1338 aa17.22■□□□□ 0.35
PRKCH-206ENST00000553830 CCDC88AQ3V6T2 1871 aa17.22■□□□□ 0.35
PRKCH-206ENST00000553830 GLRX3O76003 335 aaKnown RBP17.22■□□□□ 0.35
PRKCH-206ENST00000553830 GSPT1P15170 499 aaKnown RBP17.22■□□□□ 0.35
PRKCH-206ENST00000553830 RILPL2Q969X0 211 aa17.22■□□□□ 0.35
PRKCH-206ENST00000553830 SYT17Q9BSW7 474 aa17.22■□□□□ 0.35
PRKCH-206ENST00000553830 OSBPL3Q9H4L5 887 aa17.22■□□□□ 0.35
PRKCH-206ENST00000553830 FER1L6Q2WGJ9 1857 aa17.22■□□□□ 0.35
PRKCH-206ENST00000553830 ATP5JP18859 108 aa17.21■□□□□ 0.35
PRKCH-206ENST00000553830 SCARF1Q14162 830 aa17.21■□□□□ 0.35
PRKCH-206ENST00000553830 EDC3Q96F86 508 aaKnown RBP17.21■□□□□ 0.35
PRKCH-206ENST00000553830 CHD4Q14839 1912 aa17.21■□□□□ 0.35
PRKCH-206ENST00000553830 MYH7P12883 1935 aa17.2■□□□□ 0.34
PRKCH-206ENST00000553830 G3V3G9 751 aa17.2■□□□□ 0.34
PRKCH-206ENST00000553830 FRAT2O75474 233 aaPredicted RBP17.2■□□□□ 0.34
PRKCH-206ENST00000553830 HIBADHP31937 336 aaKnown RBP17.2■□□□□ 0.34
PRKCH-206ENST00000553830 FKBP4Q02790 459 aaKnown RBP eCLIP17.2■□□□□ 0.34
PRKCH-206ENST00000553830 DCAF8Q5TAQ9 597 aa17.2■□□□□ 0.34
PRKCH-206ENST00000553830 CC2D2BQ6DHV5 1058 aa17.2■□□□□ 0.34
PRKCH-206ENST00000553830 PI16Q6UXB8 463 aa17.2■□□□□ 0.34
PRKCH-206ENST00000553830 ZNF804AQ7Z570 1209 aa17.2■□□□□ 0.34
PRKCH-206ENST00000553830 FAM84BQ96KN1 310 aaPredicted RBP17.2■□□□□ 0.34
PRKCH-206ENST00000553830 GNL3LQ9NVN8 582 aaKnown RBP17.2■□□□□ 0.34
PRKCH-206ENST00000553830 MED23Q9ULK4 1368 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 UQCRFS1P1P0C7P4 283 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 MCAMP43121 646 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 CHAF1AQ13111 956 aaPredicted RBP17.19■□□□□ 0.34
PRKCH-206ENST00000553830 DOK7Q18PE1 504 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 WASHC4Q2M389 1173 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 SOGA3Q5TF21 947 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 FBXO33Q7Z6M2 555 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 RTKN2Q8IZC4 609 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 EYA3Q99504 573 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 JAG2Q9Y219 1238 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 IRS2Q9Y4H2 1338 aa17.19■□□□□ 0.34
PRKCH-206ENST00000553830 GOLIM4O00461 696 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 SDSP20132 328 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 ARID4AP29374 1257 aaPredicted RBP17.18■□□□□ 0.34
PRKCH-206ENST00000553830 ZAP70P43403 619 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 RASGRF1Q13972 1273 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 AOC3Q16853 763 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 FBXW7Q969H0 707 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 HAUS7Q99871 368 aa17.18■□□□□ 0.34
PRKCH-206ENST00000553830 ZC3H12CQ9C0D7 883 aaKnown RBP17.18■□□□□ 0.34
PRKCH-206ENST00000553830 ZNF277Q9NRM2 450 aaPredicted RBP17.18■□□□□ 0.34
PRKCH-206ENST00000553830 PPIP5K2O43314 1243 aa17.17■□□□□ 0.34
PRKCH-206ENST00000553830 BMP2KLQ5H9B9 411 aa17.17■□□□□ 0.34
PRKCH-206ENST00000553830 CNTROBQ8N137 903 aa17.17■□□□□ 0.34
PRKCH-206ENST00000553830 SUPT20HQ8NEM7 779 aa17.17■□□□□ 0.34
PRKCH-206ENST00000553830 SNED1Q8TER0 1413 aa17.17■□□□□ 0.34
PRKCH-206ENST00000553830 COL1A1P02452 1464 aaPredicted RBP17.17■□□□□ 0.34
PRKCH-206ENST00000553830 RASSF7Q02833 373 aa17.16■□□□□ 0.34
PRKCH-206ENST00000553830 C15orf52Q6ZUT6 534 aaKnown RBP17.16■□□□□ 0.34
PRKCH-206ENST00000553830 SPATA5Q8NB90 893 aa17.16■□□□□ 0.34
PRKCH-206ENST00000553830 PPIL4Q8WUA2 492 aaKnown RBP eCLIP17.16■□□□□ 0.34
PRKCH-206ENST00000553830 FSD1Q9BTV5 496 aa17.16■□□□□ 0.34
PRKCH-206ENST00000553830 DBNDD1Q9H9R9 158 aa17.16■□□□□ 0.34
PRKCH-206ENST00000553830 PAG1Q9NWQ8 432 aa17.16■□□□□ 0.34
PRKCH-206ENST00000553830 HMG20BQ9P0W2 317 aa17.16■□□□□ 0.34
PRKCH-206ENST00000553830 GRIPAP1Q4V328 841 aa17.15■□□□□ 0.34
PRKCH-206ENST00000553830 RTFDC1Q9BY42 306 aaPredicted RBP17.15■□□□□ 0.34
PRKCH-206ENST00000553830 TAOK3Q9H2K8 898 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 745 ms