RNA–Protein interactions for RNA: ENST00000553751.1

FOXA1-203, Transcript of forkhead box A1, humanhuman

TSL 4

Gene FOXA1, Length 507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA1-203ENST00000553751 SHTN1A0MZ66 631 aa25.52■■□□□ 1.68
FOXA1-203ENST00000553751 RPS12P25398 132 aaKnown RBP25.52■■□□□ 1.68
FOXA1-203ENST00000553751 C15orf52Q6ZUT6 534 aaKnown RBP25.52■■□□□ 1.68
FOXA1-203ENST00000553751 MICALL2Q8IY33 904 aa25.52■■□□□ 1.68
FOXA1-203ENST00000553751 LRRC24Q50LG9 513 aa25.51■■□□□ 1.67
FOXA1-203ENST00000553751 TMEM57Q8N5G2 664 aa25.51■■□□□ 1.67
FOXA1-203ENST00000553751 CNOT7Q9UIV1 285 aaKnown RBP25.51■■□□□ 1.67
FOXA1-203ENST00000553751 HDAC5Q9UQL6 1122 aa25.51■■□□□ 1.67
FOXA1-203ENST00000553751 CLEC11AQ9Y240 323 aa25.51■■□□□ 1.67
FOXA1-203ENST00000553751 PLIN1O60240 522 aa25.5■■□□□ 1.67
FOXA1-203ENST00000553751 GNAI3P08754 354 aa25.5■■□□□ 1.67
FOXA1-203ENST00000553751 MROH5Q6ZUA9 1318 aa25.5■■□□□ 1.67
FOXA1-203ENST00000553751 USP17L3A6NCW0 530 aa25.49■■□□□ 1.67
FOXA1-203ENST00000553751 USP17L4A6NCW7 530 aa25.49■■□□□ 1.67
FOXA1-203ENST00000553751 RSBN1LQ6PCB5 846 aaPredicted RBP25.49■■□□□ 1.67
FOXA1-203ENST00000553751 USP17L1Q7RTZ2 530 aa25.49■■□□□ 1.67
FOXA1-203ENST00000553751 PASKQ96RG2 1323 aa25.48■■□□□ 1.67
FOXA1-203ENST00000553751 PTPN12Q05209 780 aaKnown RBP25.48■■□□□ 1.67
FOXA1-203ENST00000553751 MAP1SQ66K74 1059 aaPredicted RBP25.48■■□□□ 1.67
FOXA1-203ENST00000553751 TRPM4Q8TD43 1214 aa25.48■■□□□ 1.67
FOXA1-203ENST00000553751 H7C1D1 291 aa25.47■■□□□ 1.67
FOXA1-203ENST00000553751 ITGBL1O95965 494 aaPredicted RBP25.47■■□□□ 1.67
FOXA1-203ENST00000553751 HIRAP54198 1017 aaPredicted RBP25.47■■□□□ 1.67
FOXA1-203ENST00000553751 VGLL2Q8N8G2 317 aa25.47■■□□□ 1.67
FOXA1-203ENST00000553751 AGBL3Q8NEM8 1001 aa25.47■■□□□ 1.67
FOXA1-203ENST00000553751 GMLQ99445 158 aa25.47■■□□□ 1.67
FOXA1-203ENST00000553751 RLBP1P12271 317 aa25.46■■□□□ 1.67
FOXA1-203ENST00000553751 UBE4AQ14139 1066 aa25.46■■□□□ 1.67
FOXA1-203ENST00000553751 DACT2Q5SW24 774 aa25.46■■□□□ 1.67
FOXA1-203ENST00000553751 FTSJ3Q8IY81 847 aaKnown RBP25.46■■□□□ 1.67
FOXA1-203ENST00000553751 DZIP1LQ8IYY4 767 aaKnown RBP25.46■■□□□ 1.67
FOXA1-203ENST00000553751 CD209Q9NNX6 404 aa25.46■■□□□ 1.67
FOXA1-203ENST00000553751 EYA2O00167 538 aa25.45■■□□□ 1.66
FOXA1-203ENST00000553751 HTRA3P83110 453 aa25.45■■□□□ 1.66
FOXA1-203ENST00000553751 METTL24Q5JXM2 366 aa25.45■■□□□ 1.66
FOXA1-203ENST00000553751 STRIP1Q5VSL9 837 aa25.45■■□□□ 1.66
FOXA1-203ENST00000553751 ZNF804AQ7Z570 1209 aa25.45■■□□□ 1.66
FOXA1-203ENST00000553751 CNTROBQ8N137 903 aa25.45■■□□□ 1.66
FOXA1-203ENST00000553751 EGFRP00533 1210 aa25.44■■□□□ 1.66
FOXA1-203ENST00000553751 MTX1Q13505 466 aa25.44■■□□□ 1.66
FOXA1-203ENST00000553751 SAMD7Q7Z3H4 446 aa25.44■■□□□ 1.66
FOXA1-203ENST00000553751 PDE8BO95263 885 aa25.43■■□□□ 1.66
FOXA1-203ENST00000553751 IL1R1P14778 569 aa25.43■■□□□ 1.66
FOXA1-203ENST00000553751 ATG9AQ7Z3C6 839 aa25.43■■□□□ 1.66
FOXA1-203ENST00000553751 FBXW7Q969H0 707 aa25.43■■□□□ 1.66
FOXA1-203ENST00000553751 MXD3Q9BW11 206 aa25.43■■□□□ 1.66
FOXA1-203ENST00000553751 PGAP2Q9UHJ9 254 aa25.43■■□□□ 1.66
FOXA1-203ENST00000553751 GNAI2P04899 355 aa25.42■■□□□ 1.66
FOXA1-203ENST00000553751 ZNF280AP59817 542 aaPredicted RBP25.42■■□□□ 1.66
FOXA1-203ENST00000553751 TBC1D10BQ4KMP7 808 aaPredicted RBP25.42■■□□□ 1.66
FOXA1-203ENST00000553751 MYO3BQ8WXR4 1341 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 CIAO1O76071 339 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 GTF2IP78347 998 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 ITPRIPQ8IWB1 547 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 ZC3H15Q8WU90 426 aaKnown RBP25.41■■□□□ 1.66
FOXA1-203ENST00000553751 SIL1Q9H173 461 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 COPRSQ9NQ92 184 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 FBXO3Q9UK99 471 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 RCAN3Q9UKA8 241 aa25.41■■□□□ 1.66
FOXA1-203ENST00000553751 USP17L8P0C7I0 530 aa25.4■■□□□ 1.66
FOXA1-203ENST00000553751 GYG1P46976 350 aa25.4■■□□□ 1.66
FOXA1-203ENST00000553751 KIF4BQ2VIQ3 1234 aa25.4■■□□□ 1.66
FOXA1-203ENST00000553751 TTLL5Q6EMB2 1281 aa25.4■■□□□ 1.66
FOXA1-203ENST00000553751 FAM84BQ96KN1 310 aaPredicted RBP25.4■■□□□ 1.66
FOXA1-203ENST00000553751 PA2G4Q9UQ80 394 aaKnown RBP25.4■■□□□ 1.66
FOXA1-203ENST00000553751 SRGAP3O43295 1099 aa25.39■■□□□ 1.66
FOXA1-203ENST00000553751 FGFR2P21802 821 aa25.38■■□□□ 1.65
FOXA1-203ENST00000553751 PUM3Q15397 648 aaKnown RBP25.38■■□□□ 1.65
FOXA1-203ENST00000553751 RBM26Q5T8P6 1007 aaKnown RBP25.38■■□□□ 1.65
FOXA1-203ENST00000553751 DNAJC5GQ8N7S2 189 aa25.38■■□□□ 1.65
FOXA1-203ENST00000553751 PANK1Q8TE04 598 aa25.38■■□□□ 1.65
FOXA1-203ENST00000553751 HIBADHP31937 336 aaKnown RBP25.37■■□□□ 1.65
FOXA1-203ENST00000553751 TDRD7Q8NHU6 1098 aaKnown RBP25.37■■□□□ 1.65
FOXA1-203ENST00000553751 CREBZFQ9NS37 354 aa25.37■■□□□ 1.65
FOXA1-203ENST00000553751 TRAF5O00463 557 aa25.36■■□□□ 1.65
FOXA1-203ENST00000553751 ZBTB7BO15156 539 aaPredicted RBP25.36■■□□□ 1.65
FOXA1-203ENST00000553751 IL15P40933 162 aaPredicted RBP25.36■■□□□ 1.65
FOXA1-203ENST00000553751 CERS5Q8N5B7 392 aa25.36■■□□□ 1.65
FOXA1-203ENST00000553751 MYOZ2Q9NPC6 264 aa25.36■■□□□ 1.65
FOXA1-203ENST00000553751 PNMA6EA0A0J9YXQ4 647 aa25.35■■□□□ 1.65
FOXA1-203ENST00000553751 FMR1Q06787 632 aaKnown RBP eCLIP25.35■■□□□ 1.65
FOXA1-203ENST00000553751 FBXO33Q7Z6M2 555 aa25.35■■□□□ 1.65
FOXA1-203ENST00000553751 GLIS2Q9BZE0 524 aaPredicted RBP25.35■■□□□ 1.65
FOXA1-203ENST00000553751 SASH1O94885 1247 aa25.34■■□□□ 1.65
FOXA1-203ENST00000553751 C1orf115Q9H7X2 142 aa25.34■■□□□ 1.65
FOXA1-203ENST00000553751 JAG2Q9Y219 1238 aa25.34■■□□□ 1.65
FOXA1-203ENST00000553751 ASTN2O75129 1339 aaPredicted RBP25.34■■□□□ 1.65
FOXA1-203ENST00000553751 FAM205AQ6ZU69 1335 aa25.34■■□□□ 1.65
FOXA1-203ENST00000553751 TMEM88BA6NKF7 163 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 IFIT1P09914 478 aaKnown RBP25.33■■□□□ 1.65
FOXA1-203ENST00000553751 MS4A1P11836 297 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 FKBP1AP62942 108 aaKnown RBP25.33■■□□□ 1.65
FOXA1-203ENST00000553751 CAVIN4Q5BKX8 364 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 KIAA0825Q8IV33 1275 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 OGFOD1Q8N543 542 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 ARAP2Q8WZ64 1704 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 LPIN2Q92539 896 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 CEP126Q9P2H0 1117 aa25.33■■□□□ 1.65
FOXA1-203ENST00000553751 SLC5A1P13866 664 aa25.32■■□□□ 1.64
FOXA1-203ENST00000553751 CDC37L1Q7L3B6 337 aa25.32■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms