RNA–Protein interactions for RNA: ENST00000553747.5

LINC00648-201, long intergenic non-protein coding RNA 648, humanhuman

TSL 5

Gene LINC00648, Length 280 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00648-201ENST00000553747 OCLNQ16625 522 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 COL13A1Q5TAT6 717 aaPredicted RBP6.41□□□□□ -1.38
LINC00648-201ENST00000553747 ABI1Q8IZP0 508 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 DCAF11Q8TEB1 546 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 UBASH3BQ8TF42 649 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 COL26A1Q96A83 441 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 MYO19Q96H55 970 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 KRTAP4-11Q9BYQ6 195 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 KCNF1Q9H3M0 494 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 C1orf115Q9H7X2 142 aa6.41□□□□□ -1.38
LINC00648-201ENST00000553747 WDR64B1ANS9 1081 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 TM4SF5O14894 197 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 PPP1R15AO75807 674 aaPredicted RBP6.4□□□□□ -1.38
LINC00648-201ENST00000553747 DUOXA2Q1HG44 320 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 CEP135Q66GS9 1140 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 OGFOD2Q6N063 350 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 CLP1Q92989 425 aaKnown RBP6.4□□□□□ -1.38
LINC00648-201ENST00000553747 MYRFLQ96LU7 910 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 MKNK1Q9BUB5 465 aa6.4□□□□□ -1.38
LINC00648-201ENST00000553747 CXXC1Q9P0U4 656 aaPredicted RBP6.4□□□□□ -1.38
LINC00648-201ENST00000553747 BMP3P12645 472 aa6.39□□□□□ -1.39
LINC00648-201ENST00000553747 SOX18P35713 384 aa6.39□□□□□ -1.39
LINC00648-201ENST00000553747 TRIP4Q15650 581 aaPredicted RBP6.39□□□□□ -1.39
LINC00648-201ENST00000553747 BEND4Q6ZU67 534 aa6.39□□□□□ -1.39
LINC00648-201ENST00000553747 FOXD4L4Q8WXT5 416 aaPredicted RBP6.39□□□□□ -1.39
LINC00648-201ENST00000553747 MUC3BQ9H195 1237 aa6.39□□□□□ -1.39
LINC00648-201ENST00000553747 ADAM11O75078 769 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 CDC27P30260 824 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 UVSSAQ2YD98 709 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 COX20Q5RI15 118 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 C16orf46Q6P387 395 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 CLEC10AQ8IUN9 316 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 FAM20CQ8IXL6 584 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 MFSD14AQ96MC6 490 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 FAM83CQ9BQN1 747 aa6.38□□□□□ -1.39
LINC00648-201ENST00000553747 SH2B1Q9NRF2 756 aaPredicted RBP6.38□□□□□ -1.39
LINC00648-201ENST00000553747 FSCN2O14926 492 aa6.37□□□□□ -1.39
LINC00648-201ENST00000553747 SART1O43290 800 aaKnown RBP6.37□□□□□ -1.39
LINC00648-201ENST00000553747 HOXD8P13378 290 aaPredicted RBP6.37□□□□□ -1.39
LINC00648-201ENST00000553747 ATP2B4P23634 1241 aa6.37□□□□□ -1.39
LINC00648-201ENST00000553747 PREPP48147 710 aa6.37□□□□□ -1.39
LINC00648-201ENST00000553747 NLRP13Q86W25 1043 aa6.37□□□□□ -1.39
LINC00648-201ENST00000553747 KLHDC7BQ96G42 594 aa6.37□□□□□ -1.39
LINC00648-201ENST00000553747 RASSF4Q9H2L5 321 aa6.37□□□□□ -1.39
LINC00648-201ENST00000553747 BRD2P25440 801 aaKnown RBP6.36□□□□□ -1.39
LINC00648-201ENST00000553747 NAA30Q147X3 362 aaPredicted RBP6.36□□□□□ -1.39
LINC00648-201ENST00000553747 KRTAP4-5Q9BYR2 181 aa6.36□□□□□ -1.39
LINC00648-201ENST00000553747 SUPT5HO00267 1087 aaKnown RBP6.35□□□□□ -1.39
LINC00648-201ENST00000553747 C8AP07357 584 aa6.35□□□□□ -1.39
LINC00648-201ENST00000553747 EPHA1P21709 976 aa6.35□□□□□ -1.39
LINC00648-201ENST00000553747 FAM26DQ5JW98 314 aa6.35□□□□□ -1.39
LINC00648-201ENST00000553747 ETFBKMTQ8IXQ9 262 aa6.35□□□□□ -1.39
LINC00648-201ENST00000553747 CACTIN-AS1Q8N1I8 211 aa6.35□□□□□ -1.39
LINC00648-201ENST00000553747 SAP130Q9H0E3 1048 aa6.35□□□□□ -1.39
LINC00648-201ENST00000553747 SMNDC1O75940 238 aaKnown RBP eCLIP6.34□□□□□ -1.39
LINC00648-201ENST00000553747 HYAL2Q12891 473 aa6.34□□□□□ -1.39
LINC00648-201ENST00000553747 CAPN12Q6ZSI9 719 aa6.34□□□□□ -1.39
LINC00648-201ENST00000553747 PPP1R3FQ6ZSY5 799 aaPredicted RBP6.34□□□□□ -1.39
LINC00648-201ENST00000553747 SHISA5Q8N114 240 aa6.34□□□□□ -1.39
LINC00648-201ENST00000553747 FBXL6Q8N531 539 aa6.34□□□□□ -1.39
LINC00648-201ENST00000553747 OR13H1Q8NG92 308 aa6.34□□□□□ -1.39
LINC00648-201ENST00000553747 PIM2Q9P1W9 311 aa6.34□□□□□ -1.39
LINC00648-201ENST00000553747 UBAP1LF5GYI3 381 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 CYP2E1P05181 493 aaPredicted RBP6.33□□□□□ -1.4
LINC00648-201ENST00000553747 NLRP12P59046 1061 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 LCE4AQ5TA78 99 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 FAM117BQ6P1L5 589 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 KLHL23Q8NBE8 558 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 SPACA7Q96KW9 195 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 FAM13BQ9NYF5 915 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 SLAIN2Q9P270 581 aa6.33□□□□□ -1.4
LINC00648-201ENST00000553747 ANGEL1Q9UNK9 670 aaKnown RBP6.33□□□□□ -1.4
LINC00648-201ENST00000553747 F13BP05160 661 aa6.32□□□□□ -1.4
LINC00648-201ENST00000553747 SCNN1AP37088 669 aa6.32□□□□□ -1.4
LINC00648-201ENST00000553747 SGO2Q562F6 1265 aa6.32□□□□□ -1.4
LINC00648-201ENST00000553747 ARID3AQ99856 593 aa6.32□□□□□ -1.4
LINC00648-201ENST00000553747 SEC31BQ9NQW1 1179 aa6.32□□□□□ -1.4
LINC00648-201ENST00000553747 STIM2Q9P246 746 aa6.32□□□□□ -1.4
LINC00648-201ENST00000553747 TMEM88BA6NKF7 163 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 TNFRSF10BO14763 440 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 COL19A1Q14993 1142 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 NFXL1Q6ZNB6 911 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 ABTB2Q8N961 1025 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 PIK3R5Q8WYR1 880 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 ATG3Q9NT62 314 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 CCDC39Q9UFE4 941 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 SEPT3Q9UH03 358 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 LEMD3Q9Y2U8 911 aa6.31□□□□□ -1.4
LINC00648-201ENST00000553747 GAS2O43903 313 aaKnown RBP6.3□□□□□ -1.4
LINC00648-201ENST00000553747 MAP4P27816 1152 aaKnown RBP6.3□□□□□ -1.4
LINC00648-201ENST00000553747 RXRBP28702 533 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 MSMPQ1L6U9 139 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 TTC39BQ5VTQ0 682 aaPredicted RBP6.3□□□□□ -1.4
LINC00648-201ENST00000553747 HGSNATQ68CP4 663 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 ANKRD34AQ69YU3 496 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 FDX2Q6P4F2 183 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 TP53INP2Q8IXH6 220 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 POP1Q99575 1024 aaKnown RBP6.3□□□□□ -1.4
LINC00648-201ENST00000553747 RUSC1Q9BVN2 902 aa6.3□□□□□ -1.4
LINC00648-201ENST00000553747 PBX4Q9BYU1 374 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms