RNA–Protein interactions for RNA: ENST00000553718.1

TTC8-208, Transcript of tetratricopeptide repeat domain 8, humanhuman

TSL 3

Gene TTC8, Length 479 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC8-208ENST00000553718 CCDC87Q9NVE4 849 aa12.72□□□□□ -0.37
TTC8-208ENST00000553718 TRMT112Q9UI30 125 aaKnown RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 NSFL1CQ9UNZ2 370 aaKnown RBP12.72□□□□□ -0.37
TTC8-208ENST00000553718 ZNF831Q5JPB2 1677 aa12.72□□□□□ -0.37
TTC8-208ENST00000553718 SPATA31A5Q5VU36 1347 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 SPATA31A7Q8IWB4 1347 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 E7EWF7 191 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 ZBTB22O15209 634 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 FGFR2P21802 821 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 IMMTQ16891 758 aaKnown RBP12.71□□□□□ -0.37
TTC8-208ENST00000553718 CLEC4GQ6UXB4 293 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 CCDC129Q6ZRS4 1044 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 LPIN2Q92539 896 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 RBM27Q9P2N5 1060 aaKnown RBP12.71□□□□□ -0.37
TTC8-208ENST00000553718 CNPY2Q9Y2B0 182 aa12.71□□□□□ -0.37
TTC8-208ENST00000553718 NRAPQ86VF7 1730 aa12.71□□□□□ -0.38
TTC8-208ENST00000553718 NWD2Q9ULI1 1742 aa12.71□□□□□ -0.38
TTC8-208ENST00000553718 ATRNO75882 1429 aa12.71□□□□□ -0.38
TTC8-208ENST00000553718 RIC1Q4ADV7 1423 aa12.71□□□□□ -0.38
TTC8-208ENST00000553718 LRP5O75197 1615 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 ZMYM6O95789 1325 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 SYCE3A1L190 88 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 ESPNB1AK53 854 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 GADD45BO75293 160 aaPredicted RBP12.7□□□□□ -0.38
TTC8-208ENST00000553718 MCM5P33992 734 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 ADD2P35612 726 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 ALX1Q15699 326 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 INTS5Q6P9B9 1019 aaKnown RBP12.7□□□□□ -0.38
TTC8-208ENST00000553718 STOX1Q6ZVD7 989 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 NECAB1Q8N987 351 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 OSBP2Q969R2 916 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 UTP14AQ9BVJ6 771 aaKnown RBP12.7□□□□□ -0.38
TTC8-208ENST00000553718 GREM2Q9H772 168 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 CNNM1Q9NRU3 951 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 CFAP45Q9UL16 551 aa12.7□□□□□ -0.38
TTC8-208ENST00000553718 SLIT2O94813 1529 aa12.69□□□□□ -0.38
TTC8-208ENST00000553718 DHX16O60231 1041 aaKnown RBP12.69□□□□□ -0.38
TTC8-208ENST00000553718 IGSF3O75054 1194 aa12.69□□□□□ -0.38
TTC8-208ENST00000553718 FKBP4Q02790 459 aaKnown RBP eCLIP12.69□□□□□ -0.38
TTC8-208ENST00000553718 DNM1Q05193 864 aaKnown RBP12.69□□□□□ -0.38
TTC8-208ENST00000553718 PUM3Q15397 648 aaKnown RBP12.69□□□□□ -0.38
TTC8-208ENST00000553718 LARP6Q9BRS8 491 aaKnown RBP12.69□□□□□ -0.38
TTC8-208ENST00000553718 ZNF330Q9Y3S2 320 aaPredicted RBP12.69□□□□□ -0.38
TTC8-208ENST00000553718 NUP98P52948 1817 aa12.69□□□□□ -0.38
TTC8-208ENST00000553718 MYH3P11055 1940 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 LOC102724428A0A0B4J2F2 783 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 VPS37CA5D8V6 355 aaPredicted RBP12.68□□□□□ -0.38
TTC8-208ENST00000553718 SLC5A1P13866 664 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 ADORA1P30542 326 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 ZAP70P43403 619 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 SIK1P57059 783 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 FGD1P98174 961 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 SCRN1Q12765 414 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 ZSCAN30Q86W11 494 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 NCOA7Q8NI08 942 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 BRF1Q92994 677 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 MTA3Q9BTC8 594 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 RRAGDQ9NQL2 400 aaPredicted RBP12.68□□□□□ -0.38
TTC8-208ENST00000553718 TBC1D2BQ9UPU7 963 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 ZNF652Q9Y2D9 606 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 TAF6LQ9Y6J9 622 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 NDUFB9Q9Y6M9 179 aa12.68□□□□□ -0.38
TTC8-208ENST00000553718 M0R2C6 588 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 CAMTA2O94983 1202 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 GPTP24298 496 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 ATP6V1AP38606 617 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 RESTQ13127 1097 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 CCDC152Q4G0S7 254 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 TMED8Q6PL24 325 aaPredicted RBP12.67□□□□□ -0.38
TTC8-208ENST00000553718 NSUN7Q8NE18 718 aaKnown RBP12.67□□□□□ -0.38
TTC8-208ENST00000553718 ARXQ96QS3 562 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 FUCA2Q9BTY2 467 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 DDX19AQ9NUU7 478 aaKnown RBP12.67□□□□□ -0.38
TTC8-208ENST00000553718 DOT1LQ8TEK3 1739 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 CARMIL3Q8ND23 1372 aa12.67□□□□□ -0.38
TTC8-208ENST00000553718 UBN2Q6ZU65 1347 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 SALL1Q9NSC2 1324 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.66□□□□□ -0.38
TTC8-208ENST00000553718 H3BQV1 296 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 ZNF213O14771 459 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 FIBPO43427 364 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 CAVIN2O95810 425 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 FGAP02671 866 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 PDIA3P30101 505 aaKnown RBP12.66□□□□□ -0.38
TTC8-208ENST00000553718 MCAMP43121 646 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 CRKLP46109 303 aaKnown RBP12.66□□□□□ -0.38
TTC8-208ENST00000553718 WASHC4Q2M389 1173 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 IFFO2Q5TF58 517 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 SUSD4Q5VX71 490 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 CCDC102BQ68D86 513 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 CDC37L1Q7L3B6 337 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 MARCH10Q8NA82 808 aaPredicted RBP12.66□□□□□ -0.38
TTC8-208ENST00000553718 SYTL4Q96C24 671 aaPredicted RBP12.66□□□□□ -0.38
TTC8-208ENST00000553718 CHAMP1Q96JM3 812 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 CDC5LQ99459 802 aaKnown RBP12.66□□□□□ -0.38
TTC8-208ENST00000553718 GDPD2Q9HCC8 539 aa12.66□□□□□ -0.38
TTC8-208ENST00000553718 PHLPP1O60346 1717 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 GPAA1O43292 621 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 GNAT2P19087 354 aa12.65□□□□□ -0.38
TTC8-208ENST00000553718 IGHMBP2P38935 993 aaKnown RBP12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms