RNA–Protein interactions for RNA: ENST00000553691.5

VIPAS39-205, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 5

Gene VIPAS39, Length 806 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-205ENST00000553691 ADH1CP00326 375 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 BMP1P13497 986 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 ERFEQ4G0M1 354 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 SULT6B1Q6IMI4 303 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 MPRIPQ6WCQ1 1025 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 IFNL2Q8IZJ0 200 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 SMC1BQ8NDV3 1235 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 CDK15Q96Q40 435 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 SLC4A9Q96Q91 983 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 C1QTNF2Q9BXJ5 285 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 TRIM34Q9BYJ4 488 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 ATP13A2Q9NQ11 1180 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 BCS1LQ9Y276 419 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 TJP1Q07157 1748 aa8.71□□□□□ -1.02
VIPAS39-205ENST00000553691 NR3C2P08235 984 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 FSHRP23945 695 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 GRM5P41594 1212 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 MLLT1Q03111 559 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 PDXDC2PQ6P474 469 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 VASH1Q7L8A9 365 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 ZBTB33Q86T24 672 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 GPKOWQ92917 476 aaPredicted RBP eCLIP8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 OCSTAMPQ9BR26 566 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 ATG3Q9NT62 314 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 ASAP1Q9ULH1 1129 aa8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 SIPA1L3O60292 1781 aaPredicted RBP8.7□□□□□ -1.02
VIPAS39-205ENST00000553691 WDR4P57081 412 aaKnown RBP8.69□□□□□ -1.02
VIPAS39-205ENST00000553691 ITPK1Q13572 414 aa8.69□□□□□ -1.02
VIPAS39-205ENST00000553691 MPNDQ8N594 471 aa8.69□□□□□ -1.02
VIPAS39-205ENST00000553691 LINC00116Q8NCU8 138 aa8.69□□□□□ -1.02
VIPAS39-205ENST00000553691 SNRKQ9NRH2 765 aa8.69□□□□□ -1.02
VIPAS39-205ENST00000553691 MYH14Q7Z406 1995 aaKnown RBP8.69□□□□□ -1.02
VIPAS39-205ENST00000553691 UBR2Q8IWV8 1755 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 LOC102724428A0A0B4J2F2 783 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 ERVV-2B6SEH9 535 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 HMOX1P09601 288 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 SIK1P57059 783 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 AMOTQ4VCS5 1084 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 PLEKHO1Q53GL0 409 aaPredicted RBP8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 ZNF530Q6P9A1 599 aaPredicted RBP8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 SMIM5Q71RC9 77 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 DCAF5Q96JK2 942 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 ZFAND3Q9H8U3 227 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 C4AP0C0L4 1744 aa8.68□□□□□ -1.02
VIPAS39-205ENST00000553691 DIAPH1O60610 1272 aaKnown RBP8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 TIMP2P16035 220 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 PTK2Q05397 1052 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 C9orf131Q5VYM1 1079 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 KCPQ6ZWJ8 1503 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 TRIM46Q7Z4K8 759 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 N4BP2Q86UW6 1770 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 ADAM32Q8TC27 787 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 SMARCC1Q92922 1105 aaPredicted RBP8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 RRAGCQ9HB90 399 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 TMOD3Q9NYL9 352 aa8.67□□□□□ -1.02
VIPAS39-205ENST00000553691 ZC3H4Q9UPT8 1303 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 ZIC2O95409 532 aaPredicted RBP8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 PPP2R1AP30153 589 aa8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 MTHFSDQ2M296 383 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 TRMT44Q8IYL2 757 aaKnown RBP8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 AIDAQ96BJ3 306 aa8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 ITPKCQ96DU7 683 aa8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 LGR6Q9HBX8 967 aa8.66□□□□□ -1.02
VIPAS39-205ENST00000553691 HSP90AB1P08238 724 aaKnown RBP8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 SNRPBP14678 240 aaKnown RBP8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 TGFB2P61812 414 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 NR5A1Q13285 461 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 AKAP4Q5JQC9 854 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 MTMR14Q8NCE2 650 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 PNMA1Q8ND90 353 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 SLC10A4Q96EP9 437 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 GTF3C3Q9Y5Q9 886 aa8.65□□□□□ -1.02
VIPAS39-205ENST00000553691 KIAA1551Q9HCM1 1747 aa8.65□□□□□ -1.03
VIPAS39-205ENST00000553691 SBF1O95248 1867 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 BRCA1P38398 1863 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 A0A0G2JLW4 131 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 RNMTO43148 476 aaKnown RBP8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 RAB15P59190 212 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 CNGB1Q14028 1251 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 NFATC2IPQ8NCF5 419 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 ZNF775Q96BV0 537 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 KLF16Q9BXK1 252 aaPredicted RBP8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 PRDM10Q9NQV6 1147 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 RNF181Q9P0P0 153 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 ARFGEF1Q9Y6D6 1849 aa8.64□□□□□ -1.03
VIPAS39-205ENST00000553691 CEMIPQ8WUJ3 1361 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 CTCFP49711 727 aaPredicted RBP8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 CABP4P57796 275 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 C1orf141Q5JVX7 400 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 ABHD8Q96I13 439 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 PHACTR3Q96KR7 559 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 KCTD15Q96SI1 283 aaPredicted RBP8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 SLC52A2Q9HAB3 445 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 MAP4K5Q9Y4K4 846 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 KIF13BQ9NQT8 1826 aa8.63□□□□□ -1.03
VIPAS39-205ENST00000553691 DLG5Q8TDM6 1919 aa8.62□□□□□ -1.03
VIPAS39-205ENST00000553691 CNTNAP4Q9C0A0 1308 aa8.62□□□□□ -1.03
VIPAS39-205ENST00000553691 MMP10P09238 476 aa8.62□□□□□ -1.03
VIPAS39-205ENST00000553691 SSFA2P28290 1259 aa8.62□□□□□ -1.03
VIPAS39-205ENST00000553691 BANK1Q8NDB2 785 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 70.4 ms