RNA–Protein interactions for RNA: ENST00000553659.1

ACTN1-209, Transcript of actinin alpha 1, humanhuman

TSL 4

Gene ACTN1, Length 434 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-209ENST00000553659 ZNF157P51786 506 aaPredicted RBP20.21■□□□□ 0.83
ACTN1-209ENST00000553659 MAP3K2Q9Y2U5 619 aa20.21■□□□□ 0.83
ACTN1-209ENST00000553659 ASTN2O75129 1339 aaPredicted RBP20.21■□□□□ 0.83
ACTN1-209ENST00000553659 KIF23Q02241 960 aaPredicted RBP20.2■□□□□ 0.82
ACTN1-209ENST00000553659 SCARF1Q14162 830 aa20.2■□□□□ 0.82
ACTN1-209ENST00000553659 KSR2Q6VAB6 950 aa20.2■□□□□ 0.82
ACTN1-209ENST00000553659 PODNQ7Z5L7 613 aa20.2■□□□□ 0.82
ACTN1-209ENST00000553659 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
ACTN1-209ENST00000553659 MLLT1Q03111 559 aaPredicted RBP20.19■□□□□ 0.82
ACTN1-209ENST00000553659 DGKZQ13574 1117 aa20.19■□□□□ 0.82
ACTN1-209ENST00000553659 EXOC6Q8TAG9 804 aa20.19■□□□□ 0.82
ACTN1-209ENST00000553659 CDCA5Q96FF9 252 aa20.19■□□□□ 0.82
ACTN1-209ENST00000553659 GMLQ99445 158 aa20.19■□□□□ 0.82
ACTN1-209ENST00000553659 CDC5LQ99459 802 aaKnown RBP20.19■□□□□ 0.82
ACTN1-209ENST00000553659 SAGE1Q9NXZ1 904 aa20.19■□□□□ 0.82
ACTN1-209ENST00000553659 PI4KAP2A4QPH2 592 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 USP17L3A6NCW0 530 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 USP17L4A6NCW7 530 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 IGKV5-2P06315 115 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 USP17L8P0C7I0 530 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 CTSWP56202 376 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 AAMPQ13685 434 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 PDE3AQ14432 1141 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 ANGEL2Q5VTE6 544 aaKnown RBP20.18■□□□□ 0.82
ACTN1-209ENST00000553659 USP17L1Q7RTZ2 530 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 PI4KAP1Q8N8J0 262 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 TTLL11Q8NHH1 800 aa20.18■□□□□ 0.82
ACTN1-209ENST00000553659 SLC10A3P09131 477 aa20.17■□□□□ 0.82
ACTN1-209ENST00000553659 NEXNQ0ZGT2 675 aa20.17■□□□□ 0.82
ACTN1-209ENST00000553659 MYOZ2Q9NPC6 264 aa20.17■□□□□ 0.82
ACTN1-209ENST00000553659 BSDC1Q9NW68 430 aaPredicted RBP20.17■□□□□ 0.82
ACTN1-209ENST00000553659 CACNA1FO60840 1977 aa20.17■□□□□ 0.82
ACTN1-209ENST00000553659 STK31Q9BXU1 1019 aa20.16■□□□□ 0.82
ACTN1-209ENST00000553659 RNF186Q9NXI6 227 aa20.16■□□□□ 0.82
ACTN1-209ENST00000553659 MINPP1Q9UNW1 487 aa20.16■□□□□ 0.82
ACTN1-209ENST00000553659 PITPNM2Q9BZ72 1349 aa20.16■□□□□ 0.82
ACTN1-209ENST00000553659 WTIPA6NIX2 430 aaPredicted RBP20.15■□□□□ 0.82
ACTN1-209ENST00000553659 MS4A1P11836 297 aa20.15■□□□□ 0.82
ACTN1-209ENST00000553659 FKBP1BP68106 108 aa20.15■□□□□ 0.82
ACTN1-209ENST00000553659 CSRNP1Q96S65 589 aa20.15■□□□□ 0.82
ACTN1-209ENST00000553659 CRBNQ96SW2 442 aa20.15■□□□□ 0.82
ACTN1-209ENST00000553659 GREM2Q9H772 168 aa20.15■□□□□ 0.82
ACTN1-209ENST00000553659 TSHZ2Q9NRE2 1034 aa20.15■□□□□ 0.82
ACTN1-209ENST00000553659 ZNF646O15015 1829 aaPredicted RBP20.15■□□□□ 0.82
ACTN1-209ENST00000553659 PAPPA2Q9BXP8 1791 aa20.14■□□□□ 0.81
ACTN1-209ENST00000553659 MED23Q9ULK4 1368 aa20.14■□□□□ 0.81
ACTN1-209ENST00000553659 FANCIQ9NVI1 1328 aa20.14■□□□□ 0.81
ACTN1-209ENST00000553659 PLIN1O60240 522 aa20.14■□□□□ 0.81
ACTN1-209ENST00000553659 TRPA1O75762 1119 aa20.14■□□□□ 0.81
ACTN1-209ENST00000553659 RARSP54136 660 aaKnown RBP20.14■□□□□ 0.81
ACTN1-209ENST00000553659 REM2Q8IYK8 340 aaPredicted RBP20.14■□□□□ 0.81
ACTN1-209ENST00000553659 TSR2Q969E8 191 aaKnown RBP20.14■□□□□ 0.81
ACTN1-209ENST00000553659 NEURL1BA8MQ27 555 aa20.13■□□□□ 0.81
ACTN1-209ENST00000553659 H7C1W4 665 aa20.13■□□□□ 0.81
ACTN1-209ENST00000553659 CCT4P50991 539 aaKnown RBP20.13■□□□□ 0.81
ACTN1-209ENST00000553659 CWF19L2Q2TBE0 894 aaKnown RBP20.13■□□□□ 0.81
ACTN1-209ENST00000553659 TWISTNBQ3B726 338 aaPredicted RBP20.12■□□□□ 0.81
ACTN1-209ENST00000553659 RASAL3Q86YV0 1011 aa20.12■□□□□ 0.81
ACTN1-209ENST00000553659 SLC4A2P04920 1241 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 DACT2Q5SW24 774 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 G2E3Q7L622 706 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 UBE3BQ7Z3V4 1068 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 OGFOD1Q8N543 542 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 COA1Q9GZY4 146 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 LEMD3Q9Y2U8 911 aa20.11■□□□□ 0.81
ACTN1-209ENST00000553659 MYO3BQ8WXR4 1341 aa20.1■□□□□ 0.81
ACTN1-209ENST00000553659 IGHMBP2P38935 993 aaKnown RBP20.1■□□□□ 0.81
ACTN1-209ENST00000553659 NBPF9Q3BBW0 867 aa20.1■□□□□ 0.81
ACTN1-209ENST00000553659 STRIP1Q5VSL9 837 aa20.1■□□□□ 0.81
ACTN1-209ENST00000553659 PLA2G12BQ9BX93 195 aa20.1■□□□□ 0.81
ACTN1-209ENST00000553659 MMP14P50281 582 aa20.09■□□□□ 0.81
ACTN1-209ENST00000553659 TXNRD3Q86VQ6 643 aa20.09■□□□□ 0.81
ACTN1-209ENST00000553659 MXD3Q9BW11 206 aa20.09■□□□□ 0.81
ACTN1-209ENST00000553659 SCAF8Q9UPN6 1271 aaKnown RBP20.09■□□□□ 0.81
ACTN1-209ENST00000553659 WNT10BO00744 389 aa20.08■□□□□ 0.81
ACTN1-209ENST00000553659 BCAR3O75815 825 aa20.08■□□□□ 0.81
ACTN1-209ENST00000553659 GCKRQ14397 625 aa20.08■□□□□ 0.81
ACTN1-209ENST00000553659 MOB2Q70IA6 237 aa20.08■□□□□ 0.81
ACTN1-209ENST00000553659 FBXW7Q969H0 707 aa20.08■□□□□ 0.81
ACTN1-209ENST00000553659 ANKRD2Q9GZV1 360 aa20.08■□□□□ 0.81
ACTN1-209ENST00000553659 ZNF804BA4D1E1 1349 aa20.07■□□□□ 0.8
ACTN1-209ENST00000553659 UBE2Q2LH0YL09 131 aa20.07■□□□□ 0.8
ACTN1-209ENST00000553659 ITGA6P23229 1130 aa20.07■□□□□ 0.8
ACTN1-209ENST00000553659 ALDH1L2Q3SY69 923 aa20.07■□□□□ 0.8
ACTN1-209ENST00000553659 PRAMEF18Q5VWM3 479 aa20.07■□□□□ 0.8
ACTN1-209ENST00000553659 TTLL5Q6EMB2 1281 aa20.07■□□□□ 0.8
ACTN1-209ENST00000553659 CSF1RP07333 972 aa20.06■□□□□ 0.8
ACTN1-209ENST00000553659 CASP7P55210 303 aa20.06■□□□□ 0.8
ACTN1-209ENST00000553659 FLIIQ13045 1269 aa20.06■□□□□ 0.8
ACTN1-209ENST00000553659 MPHOSPH8Q99549 860 aa20.06■□□□□ 0.8
ACTN1-209ENST00000553659 NF2P35240 595 aa20.05■□□□□ 0.8
ACTN1-209ENST00000553659 EXOSC9Q06265 439 aaKnown RBP20.05■□□□□ 0.8
ACTN1-209ENST00000553659 C20orf194Q5TEA3 1177 aa20.05■□□□□ 0.8
ACTN1-209ENST00000553659 KIF16BQ96L93 1317 aa20.04■□□□□ 0.8
ACTN1-209ENST00000553659 FKBP5Q13451 457 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-209ENST00000553659 TTLL12Q14166 644 aaPredicted RBP20.04■□□□□ 0.8
ACTN1-209ENST00000553659 CTU1Q7Z7A3 348 aaKnown RBP20.04■□□□□ 0.8
ACTN1-209ENST00000553659 LINS1Q8NG48 757 aa20.04■□□□□ 0.8
ACTN1-209ENST00000553659 DNAAF4Q8WXU2 420 aa20.04■□□□□ 0.8
ACTN1-209ENST00000553659 HDAC9Q9UKV0 1011 aa20.04■□□□□ 0.8
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms