RNA–Protein interactions for RNA: ENST00000553651.1

CHD8-205, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 2

Gene CHD8, Length 291 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-205ENST00000553651 OTUD5Q96G74 571 aa12.6□□□□□ -0.39
CHD8-205ENST00000553651 XDHP47989 1333 aa12.6□□□□□ -0.39
CHD8-205ENST00000553651 CUL9Q8IWT3 2517 aa12.59□□□□□ -0.39
CHD8-205ENST00000553651 MANSC4A6NHS7 340 aaPredicted RBP12.59□□□□□ -0.39
CHD8-205ENST00000553651 SASH1O94885 1247 aa12.59□□□□□ -0.39
CHD8-205ENST00000553651 RIPK4P57078 832 aa12.59□□□□□ -0.39
CHD8-205ENST00000553651 PRKG1Q13976 671 aa12.59□□□□□ -0.39
CHD8-205ENST00000553651 MAP3K11Q16584 847 aa12.59□□□□□ -0.39
CHD8-205ENST00000553651 ARMC9Q7Z3E5 817 aa12.59□□□□□ -0.39
CHD8-205ENST00000553651 ZBTB38Q8NAP3 1195 aaPredicted RBP12.59□□□□□ -0.39
CHD8-205ENST00000553651 MED23Q9ULK4 1368 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 ATP2B4P23634 1241 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 NF2P35240 595 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 INHBEP58166 350 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 CD99L2Q8TCZ2 262 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 WNK4Q96J92 1243 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 ZNF333Q96JL9 665 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 CLMNQ96JQ2 1002 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 MAPK8IP3Q9UPT6 1336 aa12.58□□□□□ -0.4
CHD8-205ENST00000553651 GJA5P36382 358 aa12.57□□□□□ -0.4
CHD8-205ENST00000553651 TMPOP42166 694 aaKnown RBP12.57□□□□□ -0.4
CHD8-205ENST00000553651 CRHR2Q13324 411 aa12.57□□□□□ -0.4
CHD8-205ENST00000553651 STRIP1Q5VSL9 837 aa12.57□□□□□ -0.4
CHD8-205ENST00000553651 ERO1AQ96HE7 468 aa12.57□□□□□ -0.4
CHD8-205ENST00000553651 ANGEL1Q9UNK9 670 aaKnown RBP12.57□□□□□ -0.4
CHD8-205ENST00000553651 COL6A3P12111 3177 aa12.57□□□□□ -0.4
CHD8-205ENST00000553651 PCCAP05165 728 aaPredicted RBP12.56□□□□□ -0.4
CHD8-205ENST00000553651 HOXB7P09629 217 aa12.56□□□□□ -0.4
CHD8-205ENST00000553651 ZBTB48P10074 688 aaPredicted RBP12.56□□□□□ -0.4
CHD8-205ENST00000553651 HDGFL1Q5TGJ6 251 aa12.56□□□□□ -0.4
CHD8-205ENST00000553651 TXNRD3Q86VQ6 643 aa12.56□□□□□ -0.4
CHD8-205ENST00000553651 APOBEC3FQ8IUX4 373 aaKnown RBP12.56□□□□□ -0.4
CHD8-205ENST00000553651 PTPN18Q99952 460 aa12.56□□□□□ -0.4
CHD8-205ENST00000553651 DBF4Q9UBU7 674 aaPredicted RBP12.56□□□□□ -0.4
CHD8-205ENST00000553651 COL1A1P02452 1464 aaPredicted RBP12.56□□□□□ -0.4
CHD8-205ENST00000553651 MYO3BQ8WXR4 1341 aa12.56□□□□□ -0.4
CHD8-205ENST00000553651 TESPA1A2RU30 521 aaPredicted RBP12.55□□□□□ -0.4
CHD8-205ENST00000553651 H0YGN5 161 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 PDE8AO60658 829 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 CCDC152Q4G0S7 254 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 OGFOD1Q8N543 542 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 CCER1Q8TC90 406 aaPredicted RBP12.55□□□□□ -0.4
CHD8-205ENST00000553651 JARID2Q92833 1246 aaPredicted RBP12.55□□□□□ -0.4
CHD8-205ENST00000553651 SLC10A4Q96EP9 437 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 CCDC85AQ96PX6 553 aaPredicted RBP12.55□□□□□ -0.4
CHD8-205ENST00000553651 PNNQ9H307 717 aaKnown RBP12.55□□□□□ -0.4
CHD8-205ENST00000553651 EFCC1Q9HA90 598 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 HYPKQ9NX55 129 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 MINPP1Q9UNW1 487 aa12.55□□□□□ -0.4
CHD8-205ENST00000553651 MMP14P50281 582 aa12.54□□□□□ -0.4
CHD8-205ENST00000553651 ANKRD18AQ8IVF6 992 aa12.54□□□□□ -0.4
CHD8-205ENST00000553651 DEFB129Q9H1M3 183 aa12.54□□□□□ -0.4
CHD8-205ENST00000553651 CCT4P50991 539 aaKnown RBP12.53□□□□□ -0.4
CHD8-205ENST00000553651 SP3Q02447 781 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 CCDC191Q8NCU4 936 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 COA1Q9GZY4 146 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 BSDC1Q9NW68 430 aaPredicted RBP12.53□□□□□ -0.4
CHD8-205ENST00000553651 TRIM35Q9UPQ4 493 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 PCDHAC2Q9Y5I4 1007 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 AOX1Q06278 1338 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 SPEF2Q9C093 1822 aa12.53□□□□□ -0.4
CHD8-205ENST00000553651 UNCXA6NJT0 531 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 KLRK1P26718 216 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 LMOD3Q0VAK6 560 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 KIAA0825Q8IV33 1275 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 MS4A4AQ96JQ5 239 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 MYD88Q99836 296 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 TMEM106CQ9BVX2 250 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 PRO3102Q9H379 93 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 PHAXQ9H814 394 aaKnown RBP12.52□□□□□ -0.41
CHD8-205ENST00000553651 PTCH2Q9Y6C5 1203 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 ECM29Q5VYK3 1845 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 OTOFQ9HC10 1997 aa12.52□□□□□ -0.41
CHD8-205ENST00000553651 USP2O75604 605 aaPredicted RBP12.51□□□□□ -0.41
CHD8-205ENST00000553651 HSP90B1P14625 803 aaKnown RBP12.51□□□□□ -0.41
CHD8-205ENST00000553651 CTSWP56202 376 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 DUSP27Q5VZP5 1158 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 TTLL5Q6EMB2 1281 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 RIC3Q7Z5B4 369 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 CERS5Q8N5B7 392 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 MTMR14Q8NCE2 650 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 TTLL11Q8NHH1 800 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 ZNF804BA4D1E1 1349 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 IRS2Q9Y4H2 1338 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 ZSWIM8A7E2V4 1837 aa12.51□□□□□ -0.41
CHD8-205ENST00000553651 DLL1O00548 723 aa12.5□□□□□ -0.41
CHD8-205ENST00000553651 NBPF12Q5TAG4 269 aaPredicted RBP12.5□□□□□ -0.41
CHD8-205ENST00000553651 CHRDL2Q6WN34 429 aa12.5□□□□□ -0.41
CHD8-205ENST00000553651 FBXW7Q969H0 707 aa12.5□□□□□ -0.41
CHD8-205ENST00000553651 CDC5LQ99459 802 aaKnown RBP12.5□□□□□ -0.41
CHD8-205ENST00000553651 GREM2Q9H772 168 aa12.5□□□□□ -0.41
CHD8-205ENST00000553651 CWC25Q9NXE8 425 aaPredicted RBP12.5□□□□□ -0.41
CHD8-205ENST00000553651 RBM27Q9P2N5 1060 aaKnown RBP12.5□□□□□ -0.41
CHD8-205ENST00000553651 PPP2R3BQ9Y5P8 575 aa12.5□□□□□ -0.41
CHD8-205ENST00000553651 MYH3P11055 1940 aa12.5□□□□□ -0.41
CHD8-205ENST00000553651 PPP1R12BO60237 982 aaPredicted RBP12.49□□□□□ -0.41
CHD8-205ENST00000553651 GTF2IP78347 998 aa12.49□□□□□ -0.41
CHD8-205ENST00000553651 GOLGA2Q08379 1002 aa12.49□□□□□ -0.41
CHD8-205ENST00000553651 SLC9C1Q4G0N8 1177 aa12.49□□□□□ -0.41
CHD8-205ENST00000553651 BRI3BPQ8WY22 251 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms