RNA–Protein interactions for RNA: ENST00000553578.5

RDH11-204, Transcript of retinol dehydrogenase 11, humanhuman

TSL 1 (best)

Gene RDH11, Length 4,035 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RDH11-204ENST00000553578 EHBP1Q8NDI1 1231 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 LRRN4Q8WUT4 740 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 CCDC94Q9BW85 323 aaPredicted RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 STK26Q9P289 416 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 ROBO2Q9HCK4 1378 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 PAPPAQ13219 1627 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 NHSL1Q5SYE7 1610 aa4.89□□□□□ -1.63
RDH11-204ENST00000553578 ZC3H4Q9UPT8 1303 aaKnown RBP4.89□□□□□ -1.63
RDH11-204ENST00000553578 KDRP35968 1356 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 PLEKHH1Q9ULM0 1364 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 PLCH1Q4KWH8 1693 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 HSP90AB2PQ58FF8 381 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 CYP4X1Q8N118 509 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 TRIM63Q969Q1 353 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 PRIMPOLQ96LW4 560 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 CEP89Q96ST8 783 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 PDZRN3Q9UPQ7 1066 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 RTL1A6NKG5 1358 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 TTC24A2A3L6 582 aaPredicted RBP4.88□□□□□ -1.63
RDH11-204ENST00000553578 SSR1P43307 286 aaKnown RBP4.88□□□□□ -1.63
RDH11-204ENST00000553578 WNT7BP56706 349 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 MLECQ14165 292 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 NBPF20Q3BBV1 942 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 NT5DC4Q86YG4 428 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 ZNF513Q8N8E2 541 aaPredicted RBP4.88□□□□□ -1.63
RDH11-204ENST00000553578 GAS2L2Q8NHY3 880 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 STK32AQ8WU08 396 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 SPOCK3Q9BQ16 436 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 PANK2Q9BZ23 570 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 SLKQ9H2G2 1235 aaPredicted RBP4.88□□□□□ -1.63
RDH11-204ENST00000553578 GEMIN8Q9NWZ8 242 aaKnown RBP4.88□□□□□ -1.63
RDH11-204ENST00000553578 WNK3Q9BYP7 1800 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 RIPK4P57078 832 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 HSP90AB4PQ58FF6 505 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 TRERF1Q96PN7 1200 aa4.88□□□□□ -1.63
RDH11-204ENST00000553578 ADGRL3Q9HAR2 1447 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 CCDC66A2RUB6 948 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 GFRA3O60609 400 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 LAPTM4AQ15012 233 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 BAP1Q92560 729 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 INPP5FQ9Y2H2 1132 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 TNFRSF10AO00220 468 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 FBXO31Q5XUX0 539 aaPredicted RBP4.87□□□□□ -1.63
RDH11-204ENST00000553578 PTCRAQ6ISU1 281 aaPredicted RBP4.87□□□□□ -1.63
RDH11-204ENST00000553578 FILIP1Q7Z7B0 1213 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 WDR63Q8IWG1 891 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 PPME1Q9Y570 386 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 ZNF831Q5JPB2 1677 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 XRCC6P12956 609 aaKnown RBP eCLIP4.87□□□□□ -1.63
RDH11-204ENST00000553578 GTF2A1P52655 376 aaPredicted RBP4.87□□□□□ -1.63
RDH11-204ENST00000553578 GGT6Q6P531 493 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 ARMCX6Q7L4S7 300 aa4.87□□□□□ -1.63
RDH11-204ENST00000553578 ZSCAN29Q8IWY8 852 aaPredicted RBP4.87□□□□□ -1.63
RDH11-204ENST00000553578 NAA30Q147X3 362 aaPredicted RBP4.86□□□□□ -1.63
RDH11-204ENST00000553578 NR6A1Q15406 480 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 DUSP27Q5VZP5 1158 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 NBPF11Q86T75 865 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 BPHLQ86WA6 291 aaPredicted RBP4.86□□□□□ -1.63
RDH11-204ENST00000553578 CPLX3Q8WVH0 158 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 TTC21AQ8NDW8 1320 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 MAGEB6P1A0A0J9YX57 407 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 WASLO00401 505 aaPredicted RBP4.86□□□□□ -1.63
RDH11-204ENST00000553578 MAP2K1Q02750 393 aaPredicted RBP4.86□□□□□ -1.63
RDH11-204ENST00000553578 SLFN5Q08AF3 891 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 BIRC2Q13490 618 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 EAPPQ56P03 285 aaPredicted RBP4.86□□□□□ -1.63
RDH11-204ENST00000553578 OXLD1Q5BKU9 147 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 RC3H1Q5TC82 1133 aaKnown RBP4.86□□□□□ -1.63
RDH11-204ENST00000553578 TIGD1Q96MW7 591 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 PCDHGB7Q9Y5F8 929 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 GLI3P10071 1580 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 SSBP05455 408 aaKnown RBP eCLIP4.86□□□□□ -1.63
RDH11-204ENST00000553578 SDR16C5Q8N3Y7 309 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 GPKOWQ92917 476 aaPredicted RBP eCLIP4.86□□□□□ -1.63
RDH11-204ENST00000553578 TRIM55Q9BYV6 548 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 USTQ9Y2C2 406 aa4.86□□□□□ -1.63
RDH11-204ENST00000553578 MRC1P22897 1456 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 STK10O94804 968 aaKnown RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 KIF4AO95239 1232 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 F12P00748 615 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 TSHZ1Q6ZSZ6 1077 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 CCDC146Q8IYE0 955 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 ZNF511Q8NB15 262 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 MYCBPQ99417 103 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 MRVI1Q9Y6F6 885 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 SHANK3Q9BYB0 1731 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 UBR2Q8IWV8 1755 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 F6X3S4 739 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 MPHOSPH10O00566 681 aaKnown RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 ATP2B4P23634 1241 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 TDO2P48775 406 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 TNNI2P48788 182 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 MCCD1P59942 119 aaPredicted RBP4.85□□□□□ -1.63
RDH11-204ENST00000553578 ZBTB33Q86T24 672 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 MTMR14Q8NCE2 650 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 FAM174AQ8TBP5 190 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 YY1AP1Q9H869 796 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 FKBPLQ9UIM3 349 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 PNMA2Q9UL42 364 aa4.85□□□□□ -1.63
RDH11-204ENST00000553578 KNSTRNQ9Y448 316 aa4.85□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms