RNA–Protein interactions for RNA: ENST00000553535.2

SIX1-202, Transcript of SIX homeobox 1, humanhuman

TSL 3

Gene SIX1, Length 1,556 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIX1-202ENST00000553535 ZNF316A6NFI3 1004 aaPredicted RBP15.9■□□□□ 0.14
SIX1-202ENST00000553535 ANP32CO43423 234 aa15.9■□□□□ 0.14
SIX1-202ENST00000553535 CASP7P55210 303 aa15.9■□□□□ 0.14
SIX1-202ENST00000553535 KIF4BQ2VIQ3 1234 aa15.9■□□□□ 0.14
SIX1-202ENST00000553535 PODNQ7Z5L7 613 aa15.9■□□□□ 0.14
SIX1-202ENST00000553535 BEGAINQ9BUH8 593 aa15.9■□□□□ 0.14
SIX1-202ENST00000553535 PLA2G12BQ9BX93 195 aa15.9■□□□□ 0.14
SIX1-202ENST00000553535 SPEF2Q9C093 1822 aa15.89■□□□□ 0.13
SIX1-202ENST00000553535 DNAAF4Q8WXU2 420 aa15.89■□□□□ 0.13
SIX1-202ENST00000553535 SALL2Q9Y467 1007 aaPredicted RBP15.89■□□□□ 0.13
SIX1-202ENST00000553535 ASTN2O75129 1339 aaPredicted RBP15.88■□□□□ 0.13
SIX1-202ENST00000553535 ADM5C9JUS6 153 aa15.88■□□□□ 0.13
SIX1-202ENST00000553535 CSF1RP07333 972 aa15.88■□□□□ 0.13
SIX1-202ENST00000553535 HUNKP57058 714 aa15.88■□□□□ 0.13
SIX1-202ENST00000553535 LINS1Q8NG48 757 aa15.88■□□□□ 0.13
SIX1-202ENST00000553535 MED23Q9ULK4 1368 aa15.88■□□□□ 0.13
SIX1-202ENST00000553535 USP17L3A6NCW0 530 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 USP17L4A6NCW7 530 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 CCT4P50991 539 aaKnown RBP15.87■□□□□ 0.13
SIX1-202ENST00000553535 EXOSC9Q06265 439 aaKnown RBP15.87■□□□□ 0.13
SIX1-202ENST00000553535 FKBP5Q13451 457 aaPredicted RBP15.87■□□□□ 0.13
SIX1-202ENST00000553535 USP17L1Q7RTZ2 530 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 GBA2Q9HCG7 927 aaPredicted RBP15.87■□□□□ 0.13
SIX1-202ENST00000553535 USP17L8P0C7I0 530 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 BRPF1P55201 1214 aaPredicted RBP15.87■□□□□ 0.13
SIX1-202ENST00000553535 SCARF1Q14162 830 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 C2orf69Q8N8R5 385 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 ZIC5Q96T25 663 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 MYH16Q9H6N6 1097 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 GGA3Q9NZ52 723 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 LEMD3Q9Y2U8 911 aa15.87■□□□□ 0.13
SIX1-202ENST00000553535 CA12O43570 354 aa15.86■□□□□ 0.13
SIX1-202ENST00000553535 ITGA6P23229 1130 aa15.86■□□□□ 0.13
SIX1-202ENST00000553535 IGHMBP2P38935 993 aaKnown RBP15.86■□□□□ 0.13
SIX1-202ENST00000553535 NOGQ13253 232 aa15.86■□□□□ 0.13
SIX1-202ENST00000553535 SULF1Q8IWU6 871 aa15.86■□□□□ 0.13
SIX1-202ENST00000553535 TSKSQ9UJT2 592 aa15.86■□□□□ 0.13
SIX1-202ENST00000553535 FAM155AB1AL88 458 aaPredicted RBP15.85■□□□□ 0.13
SIX1-202ENST00000553535 RGMBQ6NW40 437 aa15.85■□□□□ 0.13
SIX1-202ENST00000553535 TXNRD3Q86VQ6 643 aa15.85■□□□□ 0.13
SIX1-202ENST00000553535 MYOZ2Q9NPC6 264 aa15.85■□□□□ 0.13
SIX1-202ENST00000553535 CASP8AP2Q9UKL3 1982 aa15.85■□□□□ 0.13
SIX1-202ENST00000553535 FAM161AQ3B820 660 aa15.84■□□□□ 0.13
SIX1-202ENST00000553535 DACT2Q5SW24 774 aa15.84■□□□□ 0.13
SIX1-202ENST00000553535 ANGEL2Q5VTE6 544 aaKnown RBP15.84■□□□□ 0.13
SIX1-202ENST00000553535 ANKRD2Q9GZV1 360 aa15.84■□□□□ 0.13
SIX1-202ENST00000553535 COA1Q9GZY4 146 aa15.84■□□□□ 0.13
SIX1-202ENST00000553535 ZNF646O15015 1829 aaPredicted RBP15.84■□□□□ 0.13
SIX1-202ENST00000553535 STRIP1Q5VSL9 837 aa15.83■□□□□ 0.13
SIX1-202ENST00000553535 CDCA5Q96FF9 252 aa15.83■□□□□ 0.13
SIX1-202ENST00000553535 ABHD8Q96I13 439 aa15.83■□□□□ 0.13
SIX1-202ENST00000553535 ZNF804BA4D1E1 1349 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 PITPNM2Q9BZ72 1349 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 F6X3S4 739 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 FOXO4P98177 505 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 BEND3Q5T5X7 828 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 CCDC102AQ96A19 550 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 MPHOSPH8Q99549 860 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 MXD3Q9BW11 206 aa15.83■□□□□ 0.12
SIX1-202ENST00000553535 KLRK1P26718 216 aa15.82■□□□□ 0.12
SIX1-202ENST00000553535 ZNF157P51786 506 aaPredicted RBP15.82■□□□□ 0.12
SIX1-202ENST00000553535 ANKRD18BA2A2Z9 1011 aa15.81■□□□□ 0.12
SIX1-202ENST00000553535 FXR2P51116 673 aaKnown RBP eCLIP15.81■□□□□ 0.12
SIX1-202ENST00000553535 CHRNDQ07001 517 aa15.81■□□□□ 0.12
SIX1-202ENST00000553535 NBPF9Q3BBW0 867 aa15.81■□□□□ 0.12
SIX1-202ENST00000553535 MYO3BQ8WXR4 1341 aa15.81■□□□□ 0.12
SIX1-202ENST00000553535 MMP14P50281 582 aa15.8■□□□□ 0.12
SIX1-202ENST00000553535 KIF23Q02241 960 aaPredicted RBP15.8■□□□□ 0.12
SIX1-202ENST00000553535 TTLL5Q6EMB2 1281 aa15.8■□□□□ 0.12
SIX1-202ENST00000553535 FAM9BQ8IZU0 186 aa15.8■□□□□ 0.12
SIX1-202ENST00000553535 FKBP1BP68106 108 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 OGFOD1Q8N543 542 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 IRS2Q9Y4H2 1338 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 SNAP23O00161 211 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 WNT10BO00744 389 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 SLC10A3P09131 477 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 IFIT5Q13325 482 aaKnown RBP15.79■□□□□ 0.12
SIX1-202ENST00000553535 EPHA10Q5JZY3 1008 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 C15orf52Q6ZUT6 534 aaKnown RBP15.79■□□□□ 0.12
SIX1-202ENST00000553535 FBXW7Q969H0 707 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 CD209Q9NNX6 404 aa15.79■□□□□ 0.12
SIX1-202ENST00000553535 SCAF8Q9UPN6 1271 aaKnown RBP15.79■□□□□ 0.12
SIX1-202ENST00000553535 AKAP11Q9UKA4 1901 aa15.78■□□□□ 0.12
SIX1-202ENST00000553535 GRM8O00222 908 aa15.78■□□□□ 0.12
SIX1-202ENST00000553535 PITPNM1O00562 1244 aa15.78■□□□□ 0.12
SIX1-202ENST00000553535 TAF5LO75529 589 aa15.78■□□□□ 0.12
SIX1-202ENST00000553535 GTF2IP78347 998 aa15.78■□□□□ 0.12
SIX1-202ENST00000553535 LMBR1LQ6UX01 489 aa15.78■□□□□ 0.12
SIX1-202ENST00000553535 HELBQ8NG08 1087 aaPredicted RBP15.78■□□□□ 0.12
SIX1-202ENST00000553535 KCNJ4P48050 445 aa15.77■□□□□ 0.11
SIX1-202ENST00000553535 PRAMEF18Q5VWM3 479 aa15.77■□□□□ 0.11
SIX1-202ENST00000553535 ZBED3Q96IU2 234 aaPredicted RBP15.77■□□□□ 0.11
SIX1-202ENST00000553535 CSRNP1Q96S65 589 aa15.77■□□□□ 0.11
SIX1-202ENST00000553535 PAPPA2Q9BXP8 1791 aa15.76■□□□□ 0.11
SIX1-202ENST00000553535 ALDH1L1O75891 902 aa15.76■□□□□ 0.11
SIX1-202ENST00000553535 MOB2Q70IA6 237 aa15.76■□□□□ 0.11
SIX1-202ENST00000553535 RNF186Q9NXI6 227 aa15.76■□□□□ 0.11
SIX1-202ENST00000553535 SAGE1Q9NXZ1 904 aa15.76■□□□□ 0.11
SIX1-202ENST00000553535 ZNF521Q96K83 1311 aa15.76■□□□□ 0.11
SIX1-202ENST00000553535 A0A1B0GUL6 1792 aa15.76■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms