RNA–Protein interactions for RNA: ENST00000553474.5

SHMT2-205, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-205ENST00000553474 ASAP1Q9ULH1 1129 aa15.28■□□□□ 0.04
SHMT2-205ENST00000553474 A0A1B0GUL7 405 aa15.27■□□□□ 0.04
SHMT2-205ENST00000553474 STARD3NLO95772 234 aa15.27■□□□□ 0.04
SHMT2-205ENST00000553474 IFIT1P09914 478 aaKnown RBP15.27■□□□□ 0.04
SHMT2-205ENST00000553474 HSP90AB3PQ58FF7 597 aa15.27■□□□□ 0.04
SHMT2-205ENST00000553474 CCDC158Q5M9N0 1113 aa15.27■□□□□ 0.04
SHMT2-205ENST00000553474 PDZRN4Q6ZMN7 1036 aaPredicted RBP15.27■□□□□ 0.04
SHMT2-205ENST00000553474 ZBTB3Q9H5J0 574 aa15.27■□□□□ 0.04
SHMT2-205ENST00000553474 CDHR2Q9BYE9 1310 aa15.27■□□□□ 0.03
SHMT2-205ENST00000553474 ANKRD36CQ5JPF3 1778 aa15.27■□□□□ 0.03
SHMT2-205ENST00000553474 MYH3P11055 1940 aa15.27■□□□□ 0.03
SHMT2-205ENST00000553474 GOLIM4O00461 696 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 RNF113AO15541 343 aaKnown RBP15.26■□□□□ 0.03
SHMT2-205ENST00000553474 LY75O60449 1722 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 HMGN5P82970 282 aaKnown RBP15.26■□□□□ 0.03
SHMT2-205ENST00000553474 ZBTB38Q8NAP3 1195 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-205ENST00000553474 BCL11BQ9C0K0 894 aaPredicted RBP15.26■□□□□ 0.03
SHMT2-205ENST00000553474 MYH7P12883 1935 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 OFD1O75665 1012 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 CSF1RP07333 972 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 Q6ZUG5 572 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 CDC37L1Q7L3B6 337 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 SMARCC2Q8TAQ2 1214 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 FUCA2Q9BTY2 467 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 PODXL2Q9NZ53 605 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 CTNNA3Q9UI47 895 aa15.26■□□□□ 0.03
SHMT2-205ENST00000553474 PFKFB2O60825 505 aa15.25■□□□□ 0.03
SHMT2-205ENST00000553474 TIMM10P62072 90 aa15.25■□□□□ 0.03
SHMT2-205ENST00000553474 ATL3Q6DD88 541 aa15.25■□□□□ 0.03
SHMT2-205ENST00000553474 RNF214Q8ND24 703 aa15.25■□□□□ 0.03
SHMT2-205ENST00000553474 NAP1L5Q96NT1 182 aaPredicted RBP15.25■□□□□ 0.03
SHMT2-205ENST00000553474 TAF6LQ9Y6J9 622 aa15.25■□□□□ 0.03
SHMT2-205ENST00000553474 MYH15Q9Y2K3 1946 aa15.25■□□□□ 0.03
SHMT2-205ENST00000553474 CCDC192P0DO97 292 aa15.24■□□□□ 0.03
SHMT2-205ENST00000553474 CFAP45Q9UL16 551 aa15.24■□□□□ 0.03
SHMT2-205ENST00000553474 HSPD1P10809 573 aaKnown RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 FGD1P98174 961 aa15.24■□□□□ 0.03
SHMT2-205ENST00000553474 EXOSC10Q01780 885 aaKnown RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 LRRC24Q50LG9 513 aa15.24■□□□□ 0.03
SHMT2-205ENST00000553474 NAA16Q6N069 864 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 GIGYF2Q6Y7W6 1299 aaKnown RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 ILDR2Q71H61 639 aa15.24■□□□□ 0.03
SHMT2-205ENST00000553474 TTC6Q86TZ1 520 aa15.24■□□□□ 0.03
SHMT2-205ENST00000553474 ZNF274Q96GC6 653 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 ZNF512BQ96KM6 892 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 SEC62Q99442 399 aaKnown RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 ANO8Q9HCE9 1232 aaPredicted RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 DDX19AQ9NUU7 478 aaKnown RBP15.24■□□□□ 0.03
SHMT2-205ENST00000553474 MAP3K15Q6ZN16 1313 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 GOLGA6L4A6NEF3 574 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 APBA3O96018 575 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 TPM2P07951 284 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 HSP90B1P14625 803 aaKnown RBP15.23■□□□□ 0.03
SHMT2-205ENST00000553474 IFIT5Q13325 482 aaKnown RBP15.23■□□□□ 0.03
SHMT2-205ENST00000553474 CCDC129Q6ZRS4 1044 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 RGS22Q8NE09 1264 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 SPATA32Q96LK8 384 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 TCEANC2Q96MN5 208 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 TAF1LQ8IZX4 1826 aa15.23■□□□□ 0.03
SHMT2-205ENST00000553474 RGPD3A6NKT7 1758 aaPredicted RBP15.22■□□□□ 0.03
SHMT2-205ENST00000553474 RGPD4Q7Z3J3 1758 aa15.22■□□□□ 0.03
SHMT2-205ENST00000553474 EVCP57679 992 aa15.22■□□□□ 0.03
SHMT2-205ENST00000553474 SF3B2Q13435 895 aaKnown RBP15.22■□□□□ 0.03
SHMT2-205ENST00000553474 TTC39AQ5SRH9 613 aa15.22■□□□□ 0.03
SHMT2-205ENST00000553474 BRF1Q92994 677 aa15.22■□□□□ 0.03
SHMT2-205ENST00000553474 MAST3O60307 1309 aa15.22■□□□□ 0.03
SHMT2-205ENST00000553474 H3BQV1 296 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 CAVIN2O95810 425 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 MAP3K11Q16584 847 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 GORABQ5T7V8 394 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 IFFO2Q5TF58 517 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 SMARCC1Q92922 1105 aaPredicted RBP15.21■□□□□ 0.03
SHMT2-205ENST00000553474 NUP62CLQ9H1M0 184 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 NDUFB9Q9Y6M9 179 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 WDR19Q8NEZ3 1342 aa15.21■□□□□ 0.03
SHMT2-205ENST00000553474 E7EWF7 191 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 KDM4AO75164 1064 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 PTMAP06454 111 aaKnown RBP15.21■□□□□ 0.02
SHMT2-205ENST00000553474 TPM3P06753 285 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 HCLS1P14317 486 aaPredicted RBP15.21■□□□□ 0.02
SHMT2-205ENST00000553474 KCNQ4P56696 695 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 STK3Q13188 491 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 COL9A3Q14050 684 aaPredicted RBP15.21■□□□□ 0.02
SHMT2-205ENST00000553474 TAF7LQ5H9L4 462 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 ZSCAN25Q6NSZ9 544 aa15.21■□□□□ 0.02
SHMT2-205ENST00000553474 RBM43Q6ZSC3 357 aaKnown RBP15.21■□□□□ 0.02
SHMT2-205ENST00000553474 EIF2AK3Q9NZJ5 1116 aaKnown RBP15.21■□□□□ 0.02
SHMT2-205ENST00000553474 COL5A3P25940 1745 aaPredicted RBP15.21■□□□□ 0.02
SHMT2-205ENST00000553474 SCRN1Q12765 414 aa15.2■□□□□ 0.02
SHMT2-205ENST00000553474 RESTQ13127 1097 aa15.2■□□□□ 0.02
SHMT2-205ENST00000553474 STOX1Q6ZVD7 989 aa15.2■□□□□ 0.02
SHMT2-205ENST00000553474 LEO1Q8WVC0 666 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-205ENST00000553474 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
SHMT2-205ENST00000553474 ZNF594Q96JF6 807 aaPredicted RBP15.2■□□□□ 0.02
SHMT2-205ENST00000553474 AK7Q96M32 723 aa15.2■□□□□ 0.02
SHMT2-205ENST00000553474 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.2■□□□□ 0.026e-7■■□□□ 14.2
SHMT2-205ENST00000553474 NUP98P52948 1817 aa15.2■□□□□ 0.02
SHMT2-205ENST00000553474 ERVV-1B6SEH8 477 aa15.19■□□□□ 0.02
SHMT2-205ENST00000553474 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
SHMT2-205ENST00000553474 IMMTQ16891 758 aaKnown RBP15.19■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms