RNA–Protein interactions for RNA: ENST00000553455.1

SYNE2-210, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 2 BASIC

Gene SYNE2, Length 674 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-210ENST00000553455 SLC6A14Q9UN76 642 aa8.38□□□□□ -1.07
SYNE2-210ENST00000553455 ADARB2-AS1A8MUL3 147 aa8.37□□□□□ -1.07
SYNE2-210ENST00000553455 ADH6P28332 368 aa8.37□□□□□ -1.07
SYNE2-210ENST00000553455 ZC3H6P61129 1189 aaKnown RBP8.37□□□□□ -1.07
SYNE2-210ENST00000553455 MAP3K10Q02779 954 aa8.37□□□□□ -1.07
SYNE2-210ENST00000553455 PCSK7Q16549 785 aa8.37□□□□□ -1.07
SYNE2-210ENST00000553455 ADAMTSL4Q6UY14 1074 aa8.37□□□□□ -1.07
SYNE2-210ENST00000553455 ANKRD24Q8TF21 1146 aa8.37□□□□□ -1.07
SYNE2-210ENST00000553455 ERBB4Q15303 1308 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 PDE2AO00408 941 aaPredicted RBP8.36□□□□□ -1.07
SYNE2-210ENST00000553455 IGSF3O75054 1194 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 XRCC5P13010 732 aaKnown RBP8.36□□□□□ -1.07
SYNE2-210ENST00000553455 EIF2AK2P19525 551 aaKnown RBP8.36□□□□□ -1.07
SYNE2-210ENST00000553455 ITPKAP23677 461 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 ADH7P40394 386 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 MAP2K3P46734 347 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 SPRED3Q2MJR0 410 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 PPP4R2Q9NY27 417 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 PPM1HQ9ULR3 514 aa8.36□□□□□ -1.07
SYNE2-210ENST00000553455 TTF2Q9UNY4 1162 aaKnown RBP8.36□□□□□ -1.07
SYNE2-210ENST00000553455 NEURL1BA8MQ27 555 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 GHRHP01286 108 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 CPB1P15086 417 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 ZNF394Q53GI3 561 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 PERM1Q5SV97 790 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 DTHD1Q6ZMT9 781 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 ERMP1Q7Z2K6 904 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 FAM35AQ86V20 835 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 POP1Q99575 1024 aaKnown RBP8.35□□□□□ -1.07
SYNE2-210ENST00000553455 COL25A1Q9BXS0 654 aaPredicted RBP8.35□□□□□ -1.07
SYNE2-210ENST00000553455 TGIF2Q9GZN2 237 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 IGF1RP08069 1367 aa8.35□□□□□ -1.07
SYNE2-210ENST00000553455 RACK1P63244 317 aaKnown RBP8.34□□□□□ -1.07
SYNE2-210ENST00000553455 KRT76Q01546 638 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 HS2ST1Q7LGA3 356 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 PLD4Q96BZ4 506 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 LPIN3Q9BQK8 851 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 GGT7Q9UJ14 662 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 GGA1Q9UJY5 639 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 AKAP2Q9Y2D5 859 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 PCDHGB7Q9Y5F8 929 aa8.34□□□□□ -1.07
SYNE2-210ENST00000553455 A0A096LPE4 126 aa8.33□□□□□ -1.08
SYNE2-210ENST00000553455 A0A1W2PPZ6 126 aa8.33□□□□□ -1.08
SYNE2-210ENST00000553455 TERTO14746 1132 aaKnown RBP8.33□□□□□ -1.08
SYNE2-210ENST00000553455 FBXO24O75426 580 aa8.33□□□□□ -1.08
SYNE2-210ENST00000553455 NFX1Q12986 1120 aaKnown RBP8.33□□□□□ -1.08
SYNE2-210ENST00000553455 NAALADL2Q58DX5 795 aa8.33□□□□□ -1.08
SYNE2-210ENST00000553455 NOC4LQ9BVI4 516 aaKnown RBP8.33□□□□□ -1.08
SYNE2-210ENST00000553455 ZNF576Q9H609 170 aa8.33□□□□□ -1.08
SYNE2-210ENST00000553455 SRA1Q9HD15 236 aaKnown RBP8.33□□□□□ -1.08
SYNE2-210ENST00000553455 DDX41Q9UJV9 622 aaKnown RBP8.33□□□□□ -1.08
SYNE2-210ENST00000553455 NSFL1CQ9UNZ2 370 aaKnown RBP8.33□□□□□ -1.08
SYNE2-210ENST00000553455 ELOA3CA0A087WX78 387 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-210ENST00000553455 ELOA3DA6NLF2 546 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-210ENST00000553455 ELOA3BQ3SY89 546 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 CEP135Q66GS9 1140 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 ZNF787Q6DD87 383 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 SLCO4C1Q6ZQN7 724 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 USP48Q86UV5 1035 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 ELOA3Q8NG57 546 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 ASAP3Q8TDY4 903 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 TRIM56Q9BRZ2 755 aaKnown RBP8.32□□□□□ -1.08
SYNE2-210ENST00000553455 TINF2Q9BSI4 451 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 MUC3BQ9H195 1237 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 RBSNQ9H1K0 784 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 ACBD3Q9H3P7 528 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 COPRSQ9NQ92 184 aa8.32□□□□□ -1.08
SYNE2-210ENST00000553455 EPB41L3Q9Y2J2 1087 aaPredicted RBP8.32□□□□□ -1.08
SYNE2-210ENST00000553455 SMNDC1O75940 238 aaKnown RBP eCLIP8.31□□□□□ -1.08
SYNE2-210ENST00000553455 FAAP100Q0VG06 881 aa8.31□□□□□ -1.08
SYNE2-210ENST00000553455 CCDC85BQ15834 202 aaPredicted RBP8.31□□□□□ -1.08
SYNE2-210ENST00000553455 TPTE2Q6XPS3 522 aa8.31□□□□□ -1.08
SYNE2-210ENST00000553455 SMG9Q9H0W8 520 aaKnown RBP8.31□□□□□ -1.08
SYNE2-210ENST00000553455 CCSER2Q9H7U1 834 aa8.31□□□□□ -1.08
SYNE2-210ENST00000553455 FRRS1LQ9P0K9 344 aa8.31□□□□□ -1.08
SYNE2-210ENST00000553455 SOX13Q9UN79 622 aa8.31□□□□□ -1.08
SYNE2-210ENST00000553455 TRIM33Q9UPN9 1127 aa8.31□□□□□ -1.08
SYNE2-210ENST00000553455 CELA3AP09093 270 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 SRSF11Q05519 484 aaKnown RBP8.3□□□□□ -1.08
SYNE2-210ENST00000553455 PSAPL1Q6NUJ1 521 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 ELMSAN1Q6PJG2 1045 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 C1orf229Q6ZS94 237 aaPredicted RBP8.3□□□□□ -1.08
SYNE2-210ENST00000553455 GOLGA6L1Q8N7Z2 621 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 BSNDQ8WZ55 320 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 ZFYVE1Q9HBF4 777 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 STARD13Q9Y3M8 1113 aa8.3□□□□□ -1.08
SYNE2-210ENST00000553455 ENC1O14682 589 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 TNNI2P48788 182 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 RPS26P11Q5JNZ5 115 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-210ENST00000553455 SV2BQ7L1I2 683 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 VN1R5Q7Z5H4 357 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 ZNF654Q8IZM8 581 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 ACDQ96AP0 544 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 NECAB3Q96P71 396 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-210ENST00000553455 RSRP1Q9BUV0 290 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 ADAM19Q9H013 955 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 SEC31BQ9NQW1 1179 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 KBTBD4Q9NVX7 518 aa8.29□□□□□ -1.08
SYNE2-210ENST00000553455 GDF2Q9UK05 429 aaPredicted RBP8.29□□□□□ -1.08
SYNE2-210ENST00000553455 EPXP11678 715 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.5 ms