RNA–Protein interactions for RNA: ENST00000553324.5

SHMT2-204, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 4

Gene SHMT2, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-204ENST00000553324 MICALL2Q8IY33 904 aa19.19■□□□□ 0.66
SHMT2-204ENST00000553324 HELBQ8NG08 1087 aaPredicted RBP19.19■□□□□ 0.66
SHMT2-204ENST00000553324 ITGBL1O95965 494 aaPredicted RBP19.18■□□□□ 0.66
SHMT2-204ENST00000553324 MAP1SQ66K74 1059 aaPredicted RBP19.17■□□□□ 0.66
SHMT2-204ENST00000553324 ZNF804AQ7Z570 1209 aa19.17■□□□□ 0.66
SHMT2-204ENST00000553324 TXNRD3Q86VQ6 643 aa19.17■□□□□ 0.66
SHMT2-204ENST00000553324 CD209Q9NNX6 404 aa19.17■□□□□ 0.66
SHMT2-204ENST00000553324 PGAP2Q9UHJ9 254 aa19.17■□□□□ 0.66
SHMT2-204ENST00000553324 FBXO3Q9UK99 471 aa19.17■□□□□ 0.66
SHMT2-204ENST00000553324 MYO3BQ8WXR4 1341 aa19.17■□□□□ 0.66
SHMT2-204ENST00000553324 METTL24Q5JXM2 366 aa19.16■□□□□ 0.66
SHMT2-204ENST00000553324 TTLL5Q6EMB2 1281 aa19.16■□□□□ 0.66
SHMT2-204ENST00000553324 MEIS3Q99687 375 aa19.16■□□□□ 0.66
SHMT2-204ENST00000553324 PUS3Q9BZE2 481 aaKnown RBP19.16■□□□□ 0.66
SHMT2-204ENST00000553324 CREBZFQ9NS37 354 aa19.16■□□□□ 0.66
SHMT2-204ENST00000553324 PASKQ96RG2 1323 aa19.16■□□□□ 0.66
SHMT2-204ENST00000553324 USP17L8P0C7I0 530 aa19.15■□□□□ 0.66
SHMT2-204ENST00000553324 FTSJ3Q8IY81 847 aaKnown RBP19.15■□□□□ 0.66
SHMT2-204ENST00000553324 OGFOD1Q8N543 542 aa19.15■□□□□ 0.66
SHMT2-204ENST00000553324 DNAJC5GQ8N7S2 189 aa19.15■□□□□ 0.66
SHMT2-204ENST00000553324 CLUAP1Q96AJ1 413 aa19.15■□□□□ 0.66
SHMT2-204ENST00000553324 LRRFIP2Q9Y608 721 aaKnown RBP19.15■□□□□ 0.66
SHMT2-204ENST00000553324 ZNF609O15014 1411 aa19.15■□□□□ 0.66
SHMT2-204ENST00000553324 SNAP23O00161 211 aa19.14■□□□□ 0.65
SHMT2-204ENST00000553324 PDE8BO95263 885 aa19.14■□□□□ 0.65
SHMT2-204ENST00000553324 KLRK1P26718 216 aa19.14■□□□□ 0.65
SHMT2-204ENST00000553324 HIRAP54198 1017 aaPredicted RBP19.14■□□□□ 0.65
SHMT2-204ENST00000553324 ZNF280AP59817 542 aaPredicted RBP19.14■□□□□ 0.65
SHMT2-204ENST00000553324 LRRC24Q50LG9 513 aa19.14■□□□□ 0.65
SHMT2-204ENST00000553324 DACT2Q5SW24 774 aa19.14■□□□□ 0.65
SHMT2-204ENST00000553324 GMLQ99445 158 aa19.14■□□□□ 0.65
SHMT2-204ENST00000553324 TMEM88BA6NKF7 163 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 EYA2O00167 538 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 GNAI2P04899 355 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 MS4A1P11836 297 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 IL1R1P14778 569 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 RFX5P48382 616 aaPredicted RBP19.13■□□□□ 0.65
SHMT2-204ENST00000553324 PTPN12Q05209 780 aaKnown RBP19.13■□□□□ 0.65
SHMT2-204ENST00000553324 CDC37L1Q7L3B6 337 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 SAMD7Q7Z3H4 446 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 DZIP1LQ8IYY4 767 aaKnown RBP19.13■□□□□ 0.65
SHMT2-204ENST00000553324 TRPM4Q8TD43 1214 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 FBXW7Q969H0 707 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 IRS2Q9Y4H2 1338 aa19.13■□□□□ 0.65
SHMT2-204ENST00000553324 CIAO1O76071 339 aa19.12■□□□□ 0.65
SHMT2-204ENST00000553324 HIBADHP31937 336 aaKnown RBP19.12■□□□□ 0.65
SHMT2-204ENST00000553324 GTF2IP78347 998 aa19.12■□□□□ 0.65
SHMT2-204ENST00000553324 TBC1D10BQ4KMP7 808 aaPredicted RBP19.12■□□□□ 0.65
SHMT2-204ENST00000553324 CAVIN4Q5BKX8 364 aa19.12■□□□□ 0.65
SHMT2-204ENST00000553324 RBM26Q5T8P6 1007 aaKnown RBP19.12■□□□□ 0.65
SHMT2-204ENST00000553324 KLHDC4Q8TBB5 520 aa19.12■□□□□ 0.65
SHMT2-204ENST00000553324 SHTN1A0MZ66 631 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 SASH1O94885 1247 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 HTRA3P83110 453 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 KIF4BQ2VIQ3 1234 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 VPS37DQ86XT2 251 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 TMEM57Q8N5G2 664 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 KLRG1Q96E93 195 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 HDAC9Q9UKV0 1011 aa19.11■□□□□ 0.65
SHMT2-204ENST00000553324 IFIT1P09914 478 aaKnown RBP19.1■□□□□ 0.65
SHMT2-204ENST00000553324 FKBP1AP62942 108 aaKnown RBP19.1■□□□□ 0.65
SHMT2-204ENST00000553324 MTX1Q13505 466 aa19.1■□□□□ 0.65
SHMT2-204ENST00000553324 PUM3Q15397 648 aaKnown RBP19.1■□□□□ 0.65
SHMT2-204ENST00000553324 VGLL2Q8N8G2 317 aa19.1■□□□□ 0.65
SHMT2-204ENST00000553324 DCPSQ96C86 337 aaKnown RBP19.1■□□□□ 0.65
SHMT2-204ENST00000553324 FAM84BQ96KN1 310 aaPredicted RBP19.1■□□□□ 0.65
SHMT2-204ENST00000553324 MYOZ2Q9NPC6 264 aa19.1■□□□□ 0.65
SHMT2-204ENST00000553324 COPRSQ9NQ92 184 aa19.1■□□□□ 0.65
SHMT2-204ENST00000553324 ADAMTSL1Q8N6G6 1762 aa19.09■□□□□ 0.65
SHMT2-204ENST00000553324 SRGAP3O43295 1099 aa19.09■□□□□ 0.65
SHMT2-204ENST00000553324 IL15P40933 162 aaPredicted RBP19.09■□□□□ 0.65
SHMT2-204ENST00000553324 CEP126Q9P2H0 1117 aa19.09■□□□□ 0.65
SHMT2-204ENST00000553324 TNNQ9UQP3 1299 aa19.09■□□□□ 0.65
SHMT2-204ENST00000553324 SPEF2Q9C093 1822 aa19.09■□□□□ 0.65
SHMT2-204ENST00000553324 FBXO33Q7Z6M2 555 aa19.08■□□□□ 0.64
SHMT2-204ENST00000553324 TDRD7Q8NHU6 1098 aaKnown RBP19.08■□□□□ 0.64
SHMT2-204ENST00000553324 LPIN2Q92539 896 aa19.08■□□□□ 0.64
SHMT2-204ENST00000553324 EGFRP00533 1210 aa19.07■□□□□ 0.64
SHMT2-204ENST00000553324 GYG1P46976 350 aa19.07■□□□□ 0.64
SHMT2-204ENST00000553324 SCARF1Q14162 830 aa19.07■□□□□ 0.64
SHMT2-204ENST00000553324 ATG9AQ7Z3C6 839 aa19.07■□□□□ 0.64
SHMT2-204ENST00000553324 ITPRIPQ8IWB1 547 aa19.07■□□□□ 0.64
SHMT2-204ENST00000553324 RCAN3Q9UKA8 241 aa19.07■□□□□ 0.64
SHMT2-204ENST00000553324 FAM205AQ6ZU69 1335 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 FRAT2O75474 233 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-204ENST00000553324 SLC5A1P13866 664 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 FGFR2P21802 821 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 KRT26Q7Z3Y9 468 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 SULF1Q8IWU6 871 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 MXD3Q9BW11 206 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 GLIS2Q9BZE0 524 aaPredicted RBP19.06■□□□□ 0.64
SHMT2-204ENST00000553324 SIL1Q9H173 461 aa19.06■□□□□ 0.64
SHMT2-204ENST00000553324 SCN9AQ15858 1988 aa19.05■□□□□ 0.64
SHMT2-204ENST00000553324 TRAF5O00463 557 aa19.05■□□□□ 0.64
SHMT2-204ENST00000553324 ZBTB7BO15156 539 aaPredicted RBP19.05■□□□□ 0.64
SHMT2-204ENST00000553324 USP48Q86UV5 1035 aa19.05■□□□□ 0.64
SHMT2-204ENST00000553324 KIAA0825Q8IV33 1275 aa19.05■□□□□ 0.64
SHMT2-204ENST00000553324 PITPNM2Q9BZ72 1349 aa19.04■□□□□ 0.64
SHMT2-204ENST00000553324 JMYQ8N9B5 988 aa19.04■□□□□ 0.64
SHMT2-204ENST00000553324 TBC1D22AQ8WUA7 517 aa19.04■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 443.8 ms