RNA–Protein interactions for RNA: ENST00000553290.1

ACTN1-207, Transcript of actinin alpha 1, humanhuman

TSL 5

Gene ACTN1, Length 619 nt, Biotype protein coding, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-207ENST00000553290 LDHAL6AQ6ZMR3 332 aa16.34■□□□□ 0.21
ACTN1-207ENST00000553290 TXNRD3Q86VQ6 643 aa16.34■□□□□ 0.21
ACTN1-207ENST00000553290 SUCLG2Q96I99 432 aa16.34■□□□□ 0.21
ACTN1-207ENST00000553290 GMLQ99445 158 aa16.34■□□□□ 0.21
ACTN1-207ENST00000553290 EGFRP00533 1210 aa16.33■□□□□ 0.2
ACTN1-207ENST00000553290 USP17L8P0C7I0 530 aa16.33■□□□□ 0.2
ACTN1-207ENST00000553290 STRIP1Q5VSL9 837 aa16.33■□□□□ 0.2
ACTN1-207ENST00000553290 DIEXFQ68CQ4 756 aaKnown RBP16.33■□□□□ 0.2
ACTN1-207ENST00000553290 DCPSQ96C86 337 aaKnown RBP16.33■□□□□ 0.2
ACTN1-207ENST00000553290 TAF5LO75529 589 aa16.32■□□□□ 0.2
ACTN1-207ENST00000553290 CELF2O95319 508 aaKnown RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 HSPA1AP0DMV8 641 aaKnown RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 HSPA1BP0DMV9 641 aaKnown RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 BRPF1P55201 1214 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 C15orf52Q6ZUT6 534 aaKnown RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 HELBQ8NG08 1087 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 MYO3BQ8WXR4 1341 aa16.32■□□□□ 0.2
ACTN1-207ENST00000553290 KAZALD1Q96I82 304 aa16.32■□□□□ 0.2
ACTN1-207ENST00000553290 ZNF594Q96JF6 807 aaPredicted RBP16.32■□□□□ 0.2
ACTN1-207ENST00000553290 CNNM1Q9NRU3 951 aa16.32■□□□□ 0.2
ACTN1-207ENST00000553290 TLL2Q9Y6L7 1015 aa16.32■□□□□ 0.2
ACTN1-207ENST00000553290 POLR2AP24928 1970 aaKnown RBP16.31■□□□□ 0.2
ACTN1-207ENST00000553290 A0A1B0GUL6 1792 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 MMP14P50281 582 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 DACT2Q5SW24 774 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 TTLL5Q6EMB2 1281 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 KRT26Q7Z3Y9 468 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 USP48Q86UV5 1035 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 FBXW7Q969H0 707 aa16.31■□□□□ 0.2
ACTN1-207ENST00000553290 BICC1Q9H694 974 aaKnown RBP16.31■□□□□ 0.2
ACTN1-207ENST00000553290 WDR33Q9C0J8 1336 aaKnown RBP16.3■□□□□ 0.2
ACTN1-207ENST00000553290 KLRK1P26718 216 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 ECE1P42892 770 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 RABL6Q3YEC7 729 aaPredicted RBP16.3■□□□□ 0.2
ACTN1-207ENST00000553290 MIER1Q8N108 512 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 OGFOD1Q8N543 542 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 USP44Q9H0E7 712 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 CD209Q9NNX6 404 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 MYOZ2Q9NPC6 264 aa16.3■□□□□ 0.2
ACTN1-207ENST00000553290 ZNF646O15015 1829 aaPredicted RBP16.29■□□□□ 0.2
ACTN1-207ENST00000553290 IRS2Q9Y4H2 1338 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 SNAP23O00161 211 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 PLIN1O60240 522 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 ZNF804AQ7Z570 1209 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 SULF1Q8IWU6 871 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 HHIPL1Q96JK4 782 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 ZNF408Q9H9D4 720 aa16.29■□□□□ 0.2
ACTN1-207ENST00000553290 GTF2IP78347 998 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 UBE4AQ14139 1066 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 SCARF1Q14162 830 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 PAXIP1Q6ZW49 1069 aaPredicted RBP16.28■□□□□ 0.2
ACTN1-207ENST00000553290 SAPCD2Q86UD0 394 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 ANKRD44Q8N8A2 993 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 CAPNS2Q96L46 248 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 API5Q9BZZ5 524 aaKnown RBP16.28■□□□□ 0.2
ACTN1-207ENST00000553290 GGA3Q9NZ52 723 aa16.28■□□□□ 0.2
ACTN1-207ENST00000553290 NOB1Q9ULX3 412 aaKnown RBP16.28■□□□□ 0.2
ACTN1-207ENST00000553290 MROH5Q6ZUA9 1318 aa16.27■□□□□ 0.2
ACTN1-207ENST00000553290 PITPNM2Q9BZ72 1349 aa16.27■□□□□ 0.2
ACTN1-207ENST00000553290 IL1R1P14778 569 aa16.27■□□□□ 0.2
ACTN1-207ENST00000553290 RARSP54136 660 aaKnown RBP16.27■□□□□ 0.2
ACTN1-207ENST00000553290 MXD3Q9BW11 206 aa16.27■□□□□ 0.2
ACTN1-207ENST00000553290 HDAC9Q9UKV0 1011 aa16.27■□□□□ 0.2
ACTN1-207ENST00000553290 RIPOR2Q9Y4F9 1068 aa16.27■□□□□ 0.2
ACTN1-207ENST00000553290 KIF16BQ96L93 1317 aa16.26■□□□□ 0.19
ACTN1-207ENST00000553290 ADM5C9JUS6 153 aa16.26■□□□□ 0.19
ACTN1-207ENST00000553290 MAP2K1Q02750 393 aaPredicted RBP16.26■□□□□ 0.19
ACTN1-207ENST00000553290 ANGEL2Q5VTE6 544 aaKnown RBP16.26■□□□□ 0.19
ACTN1-207ENST00000553290 CYP4F22Q6NT55 531 aa16.26■□□□□ 0.19
ACTN1-207ENST00000553290 AIDAQ96BJ3 306 aa16.26■□□□□ 0.19
ACTN1-207ENST00000553290 PUS3Q9BZE2 481 aaKnown RBP16.26■□□□□ 0.19
ACTN1-207ENST00000553290 ASTN2O75129 1339 aaPredicted RBP16.25■□□□□ 0.19
ACTN1-207ENST00000553290 IFFO2Q5TF58 517 aa16.25■□□□□ 0.19
ACTN1-207ENST00000553290 C2orf69Q8N8R5 385 aa16.25■□□□□ 0.19
ACTN1-207ENST00000553290 ARHGAP45Q92619 1136 aa16.25■□□□□ 0.19
ACTN1-207ENST00000553290 WBP1LQ9NX94 342 aa16.25■□□□□ 0.19
ACTN1-207ENST00000553290 HDAC5Q9UQL6 1122 aa16.25■□□□□ 0.19
ACTN1-207ENST00000553290 UBTFL1P0CB47 393 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-207ENST00000553290 FKBP1AP62942 108 aaKnown RBP16.24■□□□□ 0.19
ACTN1-207ENST00000553290 DLK2Q6UY11 383 aa16.24■□□□□ 0.19
ACTN1-207ENST00000553290 KIAA0825Q8IV33 1275 aa16.24■□□□□ 0.19
ACTN1-207ENST00000553290 GBA2Q9HCG7 927 aaPredicted RBP16.24■□□□□ 0.19
ACTN1-207ENST00000553290 THSD7BQ9C0I4 1608 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 WNT10BO00744 389 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 FOXN1O15353 648 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 SASH1O94885 1247 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 HIBADHP31937 336 aaKnown RBP16.23■□□□□ 0.19
ACTN1-207ENST00000553290 MAP2K2P36507 400 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 HUNKP57058 714 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 HNRNPUQ00839 825 aaKnown RBP eCLIP16.23■□□□□ 0.19
ACTN1-207ENST00000553290 GRM1Q13255 1194 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 NBPF9Q3BBW0 867 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 LRRC24Q50LG9 513 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 METTL24Q5JXM2 366 aa16.23■□□□□ 0.19
ACTN1-207ENST00000553290 COL13A1Q5TAT6 717 aaPredicted RBP16.23■□□□□ 0.19
ACTN1-207ENST00000553290 IPO8O15397 1037 aaKnown RBP16.22■□□□□ 0.19
ACTN1-207ENST00000553290 CTCFP49711 727 aaPredicted RBP16.22■□□□□ 0.19
ACTN1-207ENST00000553290 CDCA5Q96FF9 252 aa16.22■□□□□ 0.19
ACTN1-207ENST00000553290 PDE8BO95263 885 aa16.21■□□□□ 0.19
ACTN1-207ENST00000553290 GYG1P46976 350 aa16.21■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms