RNA–Protein interactions for RNA: ENST00000553283.1

CHD8-203, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 4

Gene CHD8, Length 543 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-203ENST00000553283 NCBP3Q53F19 620 aaKnown RBP12.02□□□□□ -0.49
CHD8-203ENST00000553283 UBE3BQ7Z3V4 1068 aa12.02□□□□□ -0.49
CHD8-203ENST00000553283 REM2Q8IYK8 340 aaPredicted RBP12.02□□□□□ -0.49
CHD8-203ENST00000553283 CSRNP1Q96S65 589 aa12.02□□□□□ -0.49
CHD8-203ENST00000553283 RNF186Q9NXI6 227 aa12.02□□□□□ -0.49
CHD8-203ENST00000553283 IL16Q14005 1332 aa12.02□□□□□ -0.49
CHD8-203ENST00000553283 PITPNM2Q9BZ72 1349 aa12.02□□□□□ -0.49
CHD8-203ENST00000553283 MED23Q9ULK4 1368 aa12.02□□□□□ -0.49
CHD8-203ENST00000553283 TRPA1O75762 1119 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 IGHMBP2P38935 993 aaKnown RBP12.01□□□□□ -0.49
CHD8-203ENST00000553283 MLLT1Q03111 559 aaPredicted RBP12.01□□□□□ -0.49
CHD8-203ENST00000553283 GCKRQ14397 625 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 DACT2Q5SW24 774 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 STRIP1Q5VSL9 837 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 PLA2G12BQ9BX93 195 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 COA1Q9GZY4 146 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 LEMD3Q9Y2U8 911 aa12.01□□□□□ -0.49
CHD8-203ENST00000553283 CASP8AP2Q9UKL3 1982 aa12□□□□□ -0.49
CHD8-203ENST00000553283 CSF1RP07333 972 aa12□□□□□ -0.49
CHD8-203ENST00000553283 MMP14P50281 582 aa12□□□□□ -0.49
CHD8-203ENST00000553283 FLIIQ13045 1269 aa12□□□□□ -0.49
CHD8-203ENST00000553283 NBPF9Q3BBW0 867 aa12□□□□□ -0.49
CHD8-203ENST00000553283 TXNRD3Q86VQ6 643 aa12□□□□□ -0.49
CHD8-203ENST00000553283 OGFOD1Q8N543 542 aa12□□□□□ -0.49
CHD8-203ENST00000553283 MXD3Q9BW11 206 aa12□□□□□ -0.49
CHD8-203ENST00000553283 ANKRD2Q9GZV1 360 aa12□□□□□ -0.49
CHD8-203ENST00000553283 ITGA6P23229 1130 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 CASP7P55210 303 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 RASAL3Q86YV0 1011 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 LINS1Q8NG48 757 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 DNAAF4Q8WXU2 420 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 MPHOSPH8Q99549 860 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 MYH16Q9H6N6 1097 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 SCAF8Q9UPN6 1271 aaKnown RBP11.99□□□□□ -0.49
CHD8-203ENST00000553283 ZNF804BA4D1E1 1349 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 MYO3BQ8WXR4 1341 aa11.99□□□□□ -0.49
CHD8-203ENST00000553283 UBE2Q2LH0YL09 131 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 WNT10BO00744 389 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 VAMP4O75379 141 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 FKBP5Q13451 457 aaPredicted RBP11.98□□□□□ -0.49
CHD8-203ENST00000553283 PRAMEF18Q5VWM3 479 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 TTLL5Q6EMB2 1281 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 MOB2Q70IA6 237 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 FBXW7Q969H0 707 aa11.98□□□□□ -0.49
CHD8-203ENST00000553283 FANCIQ9NVI1 1328 aa11.97□□□□□ -0.49
CHD8-203ENST00000553283 KLRK1P26718 216 aa11.97□□□□□ -0.49
CHD8-203ENST00000553283 WDR63Q8IWG1 891 aa11.97□□□□□ -0.49
CHD8-203ENST00000553283 ANKRD18BA2A2Z9 1011 aa11.96□□□□□ -0.49
CHD8-203ENST00000553283 NF2P35240 595 aa11.96□□□□□ -0.49
CHD8-203ENST00000553283 KCNJ4P48050 445 aa11.96□□□□□ -0.49
CHD8-203ENST00000553283 GTF2IP78347 998 aa11.96□□□□□ -0.49
CHD8-203ENST00000553283 CHRNDQ07001 517 aa11.96□□□□□ -0.49
CHD8-203ENST00000553283 TTLL12Q14166 644 aaPredicted RBP11.96□□□□□ -0.49
CHD8-203ENST00000553283 HDAC9Q9UKV0 1011 aa11.96□□□□□ -0.49
CHD8-203ENST00000553283 SASH1O94885 1247 aa11.95□□□□□ -0.5
CHD8-203ENST00000553283 EXOSC9Q06265 439 aaKnown RBP11.95□□□□□ -0.5
CHD8-203ENST00000553283 C15orf52Q6ZUT6 534 aaKnown RBP11.95□□□□□ -0.5
CHD8-203ENST00000553283 CTU1Q7Z7A3 348 aaKnown RBP11.95□□□□□ -0.5
CHD8-203ENST00000553283 KIAA0825Q8IV33 1275 aa11.95□□□□□ -0.5
CHD8-203ENST00000553283 ZBED3Q96IU2 234 aaPredicted RBP11.95□□□□□ -0.5
CHD8-203ENST00000553283 MRS2Q9HD23 443 aa11.95□□□□□ -0.5
CHD8-203ENST00000553283 CD209Q9NNX6 404 aa11.95□□□□□ -0.5
CHD8-203ENST00000553283 PSME4Q14997 1843 aa11.95□□□□□ -0.5
CHD8-203ENST00000553283 TM4SF4P48230 202 aa11.94□□□□□ -0.5
CHD8-203ENST00000553283 FOXO4P98177 505 aa11.94□□□□□ -0.5
CHD8-203ENST00000553283 IFIT5Q13325 482 aaKnown RBP11.94□□□□□ -0.5
CHD8-203ENST00000553283 BEND3Q5T5X7 828 aa11.94□□□□□ -0.5
CHD8-203ENST00000553283 APOBEC3FQ8IUX4 373 aaKnown RBP11.94□□□□□ -0.5
CHD8-203ENST00000553283 SALL2Q9Y467 1007 aaPredicted RBP11.94□□□□□ -0.5
CHD8-203ENST00000553283 PAPPA2Q9BXP8 1791 aa11.94□□□□□ -0.5
CHD8-203ENST00000553283 IRS2Q9Y4H2 1338 aa11.93□□□□□ -0.5
CHD8-203ENST00000553283 F6X3S4 739 aa11.93□□□□□ -0.5
CHD8-203ENST00000553283 SNAP23O00161 211 aa11.93□□□□□ -0.5
CHD8-203ENST00000553283 TAF5LO75529 589 aa11.93□□□□□ -0.5
CHD8-203ENST00000553283 TBC1D8O95759 1140 aa11.93□□□□□ -0.5
CHD8-203ENST00000553283 PTPN12Q05209 780 aaKnown RBP11.93□□□□□ -0.5
CHD8-203ENST00000553283 ARMC9Q7Z3E5 817 aa11.93□□□□□ -0.5
CHD8-203ENST00000553283 HELBQ8NG08 1087 aaPredicted RBP11.93□□□□□ -0.5
CHD8-203ENST00000553283 IL1R1P14778 569 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 DLGAP5Q15398 846 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 LDLRAD1Q5T700 205 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 LMBR1LQ6UX01 489 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 CERS5Q8N5B7 392 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 MTMR14Q8NCE2 650 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 DEFB129Q9H1M3 183 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 CHMP3Q9Y3E7 222 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 MYH3P11055 1940 aa11.92□□□□□ -0.5
CHD8-203ENST00000553283 ANP32CO43423 234 aa11.91□□□□□ -0.5
CHD8-203ENST00000553283 FKBP1AP62942 108 aaKnown RBP11.91□□□□□ -0.5
CHD8-203ENST00000553283 SREBF2Q12772 1141 aa11.91□□□□□ -0.5
CHD8-203ENST00000553283 PRKG1Q13976 671 aa11.91□□□□□ -0.5
CHD8-203ENST00000553283 PKN2Q16513 984 aaKnown RBP11.91□□□□□ -0.5
CHD8-203ENST00000553283 CCDC57Q2TAC2 916 aa11.91□□□□□ -0.5
CHD8-203ENST00000553283 NOM1Q5C9Z4 860 aaKnown RBP11.91□□□□□ -0.5
CHD8-203ENST00000553283 EPHA10Q5JZY3 1008 aa11.91□□□□□ -0.5
CHD8-203ENST00000553283 ZNF804AQ7Z570 1209 aa11.91□□□□□ -0.5
CHD8-203ENST00000553283 ZNF296Q8WUU4 475 aaPredicted RBP11.91□□□□□ -0.5
CHD8-203ENST00000553283 SPINK5Q9NQ38 1064 aaPredicted RBP11.91□□□□□ -0.5
CHD8-203ENST00000553283 ANGEL1Q9UNK9 670 aaKnown RBP11.91□□□□□ -0.5
CHD8-203ENST00000553283 AKAP11Q9UKA4 1901 aa11.9□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms