RNA–Protein interactions for RNA: ENST00000552800.2

TMEM116-216, Transcript of transmembrane protein 116, humanhuman

TSL 3

Gene TMEM116, Length 485 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-216ENST00000552800 CCDC8Q9H0W5 538 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-216ENST00000552800 CCNL1Q9UK58 526 aaPredicted RBP11.92□□□□□ -0.5
TMEM116-216ENST00000552800 ZNF609O15014 1411 aa11.92□□□□□ -0.5
TMEM116-216ENST00000552800 MROH5Q6ZUA9 1318 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 IGSF3O75054 1194 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 PDE8BO95263 885 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 GPTP24298 496 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 HSPA4P34932 840 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 SYNE4Q8N205 404 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 ARHGEF1Q92888 912 aaKnown RBP11.91□□□□□ -0.5
TMEM116-216ENST00000552800 RILPL2Q969X0 211 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 LSG1Q9H089 658 aaKnown RBP11.91□□□□□ -0.5
TMEM116-216ENST00000552800 SIL1Q9H173 461 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 ANTXR1Q9H6X2 564 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 GREM2Q9H772 168 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 LRRC4BQ9NT99 713 aa11.91□□□□□ -0.5
TMEM116-216ENST00000552800 NIP7Q9Y221 180 aaKnown RBP eCLIP11.91□□□□□ -0.5
TMEM116-216ENST00000552800 A0A1B0GUL7 405 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 SSFA2P28290 1259 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 DDIT3P35638 169 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 CCDC152Q4G0S7 254 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 TRAPPC3LQ5T215 181 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 TSHZ3Q63HK5 1081 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 LDHAL6AQ6ZMR3 332 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 UBR3Q6ZT12 1888 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 MAP4K1Q92918 833 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 DBNDD2Q9BQY9 259 aa11.9□□□□□ -0.5
TMEM116-216ENST00000552800 PUS3Q9BZE2 481 aaKnown RBP11.9□□□□□ -0.5
TMEM116-216ENST00000552800 TLR7Q9NYK1 1049 aaKnown RBP11.9□□□□□ -0.5
TMEM116-216ENST00000552800 RGPD3A6NKT7 1758 aaPredicted RBP11.9□□□□□ -0.51
TMEM116-216ENST00000552800 RGPD4Q7Z3J3 1758 aa11.9□□□□□ -0.51
TMEM116-216ENST00000552800 MCM2P49736 904 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 TIMM10P62072 90 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 NECTIN1Q15223 517 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 USPL1Q5W0Q7 1092 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 KBTBD3Q8NAB2 608 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 ZNF594Q96JF6 807 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-216ENST00000552800 TM6SF1Q9BZW5 370 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 ZNF330Q9Y3S2 320 aaPredicted RBP11.89□□□□□ -0.51
TMEM116-216ENST00000552800 AKAP11Q9UKA4 1901 aa11.89□□□□□ -0.51
TMEM116-216ENST00000552800 TM4SF1P30408 202 aa11.88□□□□□ -0.51
TMEM116-216ENST00000552800 TPTE2Q6XPS3 522 aa11.88□□□□□ -0.51
TMEM116-216ENST00000552800 ALDH8A1Q9H2A2 487 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-216ENST00000552800 BOLA2Q9H3K6 86 aa11.88□□□□□ -0.51
TMEM116-216ENST00000552800 BSDC1Q9NW68 430 aaPredicted RBP11.88□□□□□ -0.51
TMEM116-216ENST00000552800 MED23Q9ULK4 1368 aa11.88□□□□□ -0.51
TMEM116-216ENST00000552800 C4AP0C0L4 1744 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 ARAP2Q8WZ64 1704 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 KLRG2A4D1S0 409 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-216ENST00000552800 ZPR1O75312 459 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 MCCP23508 829 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 ARID4AP29374 1257 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-216ENST00000552800 RTL5Q5HYW3 569 aaPredicted RBP11.87□□□□□ -0.51
TMEM116-216ENST00000552800 CCDC158Q5M9N0 1113 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 TBC1D9BQ66K14 1250 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 LPIN2Q92539 896 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 XAGE2Q96GT9 111 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 SETDB2Q96T68 719 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 CDC5LQ99459 802 aaKnown RBP11.87□□□□□ -0.51
TMEM116-216ENST00000552800 IL25Q9H293 177 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 HELLSQ9NRZ9 838 aa11.87□□□□□ -0.51
TMEM116-216ENST00000552800 A0A0G2JS52 829 aa11.86□□□□□ -0.51
TMEM116-216ENST00000552800 RXRBP28702 533 aa11.86□□□□□ -0.51
TMEM116-216ENST00000552800 MYT1Q01538 1121 aa11.86□□□□□ -0.51
TMEM116-216ENST00000552800 LRRFIP1Q32MZ4 808 aaKnown RBP11.86□□□□□ -0.51
TMEM116-216ENST00000552800 TMED8Q6PL24 325 aaPredicted RBP11.86□□□□□ -0.51
TMEM116-216ENST00000552800 TMEM92Q6UXU6 159 aa11.86□□□□□ -0.51
TMEM116-216ENST00000552800 ARXQ96QS3 562 aa11.86□□□□□ -0.51
TMEM116-216ENST00000552800 CHMP3Q9Y3E7 222 aa11.86□□□□□ -0.51
TMEM116-216ENST00000552800 GNPATO15228 680 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 ZFYP08048 801 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-216ENST00000552800 UBE4AQ14139 1066 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 PUM3Q15397 648 aaKnown RBP11.85□□□□□ -0.51
TMEM116-216ENST00000552800 ATP2B3Q16720 1220 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 FAM182BQ5T319 152 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 AMIGO3Q86WK7 504 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 FLAD1Q8NFF5 587 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 TMC2Q8TDI7 906 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 RNF166Q96A37 237 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-216ENST00000552800 LARP6Q9BRS8 491 aaKnown RBP11.85□□□□□ -0.51
TMEM116-216ENST00000552800 CRISPLD2Q9H0B8 497 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 DIAPH3Q9NSV4 1193 aa11.85□□□□□ -0.51
TMEM116-216ENST00000552800 DAXXQ9UER7 740 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-216ENST00000552800 RGS17Q9UGC6 210 aaPredicted RBP11.85□□□□□ -0.51
TMEM116-216ENST00000552800 K7ELQ4 463 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-216ENST00000552800 TAF5LO75529 589 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 IFIT1P09914 478 aaKnown RBP11.84□□□□□ -0.51
TMEM116-216ENST00000552800 UQCRFS1P1P0C7P4 283 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 HCLS1P14317 486 aaPredicted RBP11.84□□□□□ -0.51
TMEM116-216ENST00000552800 RFC4P35249 363 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 TXNRD1Q16881 649 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 ERFEQ4G0M1 354 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 MCMDC2Q4G0Z9 681 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 TAF7LQ5H9L4 462 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 METTL24Q5JXM2 366 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 ZMYM1Q5SVZ6 1142 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 KIAA1211Q6ZU35 1233 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 FBXO41Q8TF61 875 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 NLRP3Q96P20 1036 aa11.84□□□□□ -0.51
TMEM116-216ENST00000552800 CNNM1Q9NRU3 951 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms