RNA–Protein interactions for RNA: ENST00000552773.1

RFX4-210, Transcript of regulatory factor X4, humanhuman

TSL 1 (best)

Gene RFX4, Length 1,659 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX4-210ENST00000552773 UBE3CQ15386 1083 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 PUM3Q15397 648 aaKnown RBP12.26□□□□□ -0.45
RFX4-210ENST00000552773 DDB1Q16531 1140 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 CPLX2Q6PUV4 134 aaKnown RBP12.26□□□□□ -0.45
RFX4-210ENST00000552773 NCOA7Q8NI08 942 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 SMARCC2Q8TAQ2 1214 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 LPIN2Q92539 896 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 EDC3Q96F86 508 aaKnown RBP12.26□□□□□ -0.45
RFX4-210ENST00000552773 FAM89AQ96GI7 184 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 RIPOR2Q9Y4F9 1068 aa12.26□□□□□ -0.45
RFX4-210ENST00000552773 MAST3O60307 1309 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 ITGB4P16144 1822 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 E7EWF7 191 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 ZNF213O14771 459 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 CTAGE5O15320 804 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 CDKL5O76039 1030 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 PDE8BO95263 885 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 EVCP57679 992 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 EXOSC10Q01780 885 aaKnown RBP12.25□□□□□ -0.45
RFX4-210ENST00000552773 BRF1Q92994 677 aa12.25□□□□□ -0.45
RFX4-210ENST00000552773 ZNF594Q96JF6 807 aaPredicted RBP12.25□□□□□ -0.45
RFX4-210ENST00000552773 GOLGA6L6A8MZA4 724 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 PTMAP06454 111 aaKnown RBP12.24□□□□□ -0.45
RFX4-210ENST00000552773 CCDC152Q4G0S7 254 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 ZNF34Q8IZ26 560 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 NUP62CLQ9H1M0 184 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 CCDC87Q9NVE4 849 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 NOL7Q9UMY1 257 aaKnown RBP12.24□□□□□ -0.45
RFX4-210ENST00000552773 CARMIL3Q8ND23 1372 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 RTL9Q8NET4 1388 aa12.24□□□□□ -0.45
RFX4-210ENST00000552773 GADD45BO75293 160 aaPredicted RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 GNAT2P19087 354 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 MAP3K11Q16584 847 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 TMED8Q6PL24 325 aaPredicted RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 BARGINQ6ZT62 677 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 SYTL4Q96C24 671 aaPredicted RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 CDC5LQ99459 802 aaKnown RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 MPHOSPH8Q99549 860 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 LARP6Q9BRS8 491 aaKnown RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 GDPD2Q9HCC8 539 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 ZMYM6O95789 1325 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 ATRNO75882 1429 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 WNK3Q9BYP7 1800 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 ROBO1Q9Y6N7 1651 aa12.23□□□□□ -0.45
RFX4-210ENST00000552773 CICQ96RK0 1608 aaPredicted RBP12.23□□□□□ -0.45
RFX4-210ENST00000552773 ARID4AP29374 1257 aaPredicted RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 IGHMBP2P38935 993 aaKnown RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 MAP3K12Q12852 859 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 FOXD4L6Q3SYB3 417 aaPredicted RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 FOXD4L3Q6VB84 417 aaPredicted RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 CCDC129Q6ZRS4 1044 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 SEC62Q99442 399 aaKnown RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 PUS3Q9BZE2 481 aaKnown RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 RRAGDQ9NQL2 400 aaPredicted RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 MYH3P11055 1940 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 SPATA31A1Q5TZJ5 1347 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 IGSF3O75054 1194 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 TERF1P54274 439 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 EIF5P55010 431 aaKnown RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 ST3GAL1Q11201 340 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 STK3Q13188 491 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 CLEC4GQ6UXB4 293 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 CDC37L1Q7L3B6 337 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 MTA3Q9BTC8 594 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 CNNM2Q9H8M5 875 aa12.22□□□□□ -0.45
RFX4-210ENST00000552773 NSFL1CQ9UNZ2 370 aaKnown RBP12.22□□□□□ -0.45
RFX4-210ENST00000552773 CPLX1O14810 134 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 ZBTB22O15209 634 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 GPTP24298 496 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 ADD2P35612 726 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 KIAA2012Q0VF49 1180 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 SCRN1Q12765 414 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 ALX1Q15699 326 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 TMEM87BQ96K49 555 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 NACAP1Q9BZK3 213 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 TNMDQ9H2S6 317 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 GREM2Q9H772 168 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 GNL3LQ9NVN8 582 aaKnown RBP12.21□□□□□ -0.45
RFX4-210ENST00000552773 ZBTB1Q9Y2K1 713 aa12.21□□□□□ -0.45
RFX4-210ENST00000552773 CCDC9Q9Y3X0 531 aaKnown RBP12.21□□□□□ -0.45
RFX4-210ENST00000552773 PTPDC1A2A3K4 754 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 GPAA1O43292 621 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 ZNF500O60304 480 aaPredicted RBP12.2□□□□□ -0.46
RFX4-210ENST00000552773 ZAP70P43403 619 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 HLFQ16534 295 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 SASS6Q6UVJ0 657 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 BRAPQ7Z569 592 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 NSUN7Q8NE18 718 aaKnown RBP12.2□□□□□ -0.46
RFX4-210ENST00000552773 BICD2Q8TD16 824 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 LEO1Q8WVC0 666 aaPredicted RBP12.2□□□□□ -0.46
RFX4-210ENST00000552773 OSBP2Q969R2 916 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 USP25Q9UHP3 1055 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 ZKSCAN5Q9Y2L8 839 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 RIC1Q4ADV7 1423 aa12.2□□□□□ -0.46
RFX4-210ENST00000552773 HMGB2P26583 209 aaKnown RBP12.19□□□□□ -0.46
RFX4-210ENST00000552773 PDIA3P30101 505 aaKnown RBP12.19□□□□□ -0.46
RFX4-210ENST00000552773 ATP6V1AP38606 617 aa12.19□□□□□ -0.46
RFX4-210ENST00000552773 RESTQ13127 1097 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms