RNA–Protein interactions for RNA: ENST00000552606.1

CCDC59-207, Transcript of coiled-coil domain containing 59, humanhuman

TSL 2

Gene CCDC59, Length 600 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC59-207ENST00000552606 EYA2O00167 538 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 CIAO1O76071 339 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 UFL1O94874 794 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 ATP8B2P98198 1209 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 KIAA2012Q0VF49 1180 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 AOC3Q16853 763 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 LDHAL6AQ6ZMR3 332 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 SUPT20HQ8NEM7 779 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 GPR101Q96P66 508 aaPredicted RBP11.38□□□□□ -0.59
CCDC59-207ENST00000552606 VPS33BQ9H267 617 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 GGA1Q9UJY5 639 aa11.38□□□□□ -0.59
CCDC59-207ENST00000552606 MYO5AQ9Y4I1 1855 aaKnown RBP11.38□□□□□ -0.59
CCDC59-207ENST00000552606 MROH5Q6ZUA9 1318 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 MAST2Q6P0Q8 1798 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 ATP2B4P23634 1241 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 KLRK1P26718 216 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 SIRT2Q8IXJ6 389 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 ANKRD2Q9GZV1 360 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 TMX4Q9H1E5 349 aaPredicted RBP11.37□□□□□ -0.59
CCDC59-207ENST00000552606 CHMP4BQ9H444 224 aaKnown RBP11.37□□□□□ -0.59
CCDC59-207ENST00000552606 CNNM1Q9NRU3 951 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 ANKIB1Q9P2G1 1089 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 DOCK2Q92608 1830 aa11.37□□□□□ -0.59
CCDC59-207ENST00000552606 SNAP23O00161 211 aa11.36□□□□□ -0.59
CCDC59-207ENST00000552606 PPIP5K2O43314 1243 aa11.36□□□□□ -0.59
CCDC59-207ENST00000552606 TAF5LO75529 589 aa11.36□□□□□ -0.59
CCDC59-207ENST00000552606 C15orf52Q6ZUT6 534 aaKnown RBP11.36□□□□□ -0.59
CCDC59-207ENST00000552606 HELBQ8NG08 1087 aaPredicted RBP11.36□□□□□ -0.59
CCDC59-207ENST00000552606 SIL1Q9H173 461 aa11.36□□□□□ -0.59
CCDC59-207ENST00000552606 LEMD3Q9Y2U8 911 aa11.36□□□□□ -0.59
CCDC59-207ENST00000552606 ZNF804BA4D1E1 1349 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 ZNF541Q9H0D2 1346 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 YDJCA8MPS7 323 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 C6orf229H3BNL8 230 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 FZD9O00144 591 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 FGFR2P21802 821 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 TXNRD3Q86VQ6 643 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 EYA3Q99504 573 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP11.35□□□□□ -0.59
CCDC59-207ENST00000552606 MYH7P12883 1935 aa11.35□□□□□ -0.59
CCDC59-207ENST00000552606 COL1A1P02452 1464 aaPredicted RBP11.34□□□□□ -0.59
CCDC59-207ENST00000552606 PDE8BO95263 885 aa11.34□□□□□ -0.59
CCDC59-207ENST00000552606 IL15P40933 162 aaPredicted RBP11.34□□□□□ -0.59
CCDC59-207ENST00000552606 UBE4AQ14139 1066 aa11.34□□□□□ -0.59
CCDC59-207ENST00000552606 WASHC4Q2M389 1173 aa11.34□□□□□ -0.59
CCDC59-207ENST00000552606 METTL24Q5JXM2 366 aa11.34□□□□□ -0.59
CCDC59-207ENST00000552606 RPAP2Q8IXW5 612 aaPredicted RBP11.34□□□□□ -0.59
CCDC59-207ENST00000552606 LARGE2Q8N3Y3 721 aa11.34□□□□□ -0.59
CCDC59-207ENST00000552606 NOP58Q9Y2X3 529 aaKnown RBP11.34□□□□□ -0.59
CCDC59-207ENST00000552606 ECE2O60344 883 aa11.33□□□□□ -0.6
CCDC59-207ENST00000552606 SASH1O94885 1247 aa11.33□□□□□ -0.6
CCDC59-207ENST00000552606 PUM3Q15397 648 aaKnown RBP11.33□□□□□ -0.6
CCDC59-207ENST00000552606 NIM1KQ8IY84 436 aa11.33□□□□□ -0.6
CCDC59-207ENST00000552606 PCDHB15Q9Y5E8 787 aa11.33□□□□□ -0.6
CCDC59-207ENST00000552606 RIMBP2O15034 1052 aa11.32□□□□□ -0.6
CCDC59-207ENST00000552606 YY1P25490 414 aa11.32□□□□□ -0.6
CCDC59-207ENST00000552606 ZNF579Q8NAF0 562 aaKnown RBP11.32□□□□□ -0.6
CCDC59-207ENST00000552606 EXOC6Q8TAG9 804 aa11.32□□□□□ -0.6
CCDC59-207ENST00000552606 DBNDD1Q9H9R9 158 aa11.32□□□□□ -0.6
CCDC59-207ENST00000552606 ZNRF3Q9ULT6 936 aa11.32□□□□□ -0.6
CCDC59-207ENST00000552606 HMMRO75330 724 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 KCNJ4P48050 445 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 TFCP2Q12800 502 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 AAMPQ13685 434 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 JDP2Q8WYK2 163 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 ZC3H12CQ9C0D7 883 aaKnown RBP11.31□□□□□ -0.6
CCDC59-207ENST00000552606 COA1Q9GZY4 146 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 EXOC6BQ9Y2D4 811 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 MYH2Q9UKX2 1941 aa11.31□□□□□ -0.6
CCDC59-207ENST00000552606 CDK5RAP2Q96SN8 1893 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 GLTPD2A6NH11 291 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 SURF6O75683 361 aaKnown RBP11.3□□□□□ -0.6
CCDC59-207ENST00000552606 IRX6P78412 446 aaPredicted RBP11.3□□□□□ -0.6
CCDC59-207ENST00000552606 CXCL9Q07325 125 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 ATP2B3Q16720 1220 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 DOK7Q18PE1 504 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 LPIN2Q92539 896 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 L3MBTL3Q96JM7 780 aaPredicted RBP11.3□□□□□ -0.6
CCDC59-207ENST00000552606 CEP126Q9P2H0 1117 aa11.3□□□□□ -0.6
CCDC59-207ENST00000552606 AK9Q5TCS8 1911 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 POLR2AP24928 1970 aaKnown RBP11.29□□□□□ -0.6
CCDC59-207ENST00000552606 SLC5A1P13866 664 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 IL1R1P14778 569 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 GYG1P46976 350 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 G3BP1Q13283 466 aaKnown RBP eCLIP11.29□□□□□ -0.6
CCDC59-207ENST00000552606 ZNF804AQ7Z570 1209 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 PODNQ7Z5L7 613 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 FBXO33Q7Z6M2 555 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 GPC2Q8N158 579 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 ZNF784Q8NCA9 323 aaPredicted RBP11.29□□□□□ -0.6
CCDC59-207ENST00000552606 FAM84BQ96KN1 310 aaPredicted RBP11.29□□□□□ -0.6
CCDC59-207ENST00000552606 CD209Q9NNX6 404 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 GPR108Q9NPR9 543 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 KCNQ5Q9NR82 932 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 FOCADQ5VW36 1801 aa11.29□□□□□ -0.6
CCDC59-207ENST00000552606 A0A1B0GUL7 405 aa11.28□□□□□ -0.6
CCDC59-207ENST00000552606 POTECB2RU33 542 aa11.28□□□□□ -0.6
CCDC59-207ENST00000552606 PSMD14O00487 310 aa11.28□□□□□ -0.6
CCDC59-207ENST00000552606 DDNO94850 711 aaPredicted RBP11.28□□□□□ -0.6
CCDC59-207ENST00000552606 IFIT1P09914 478 aaKnown RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms