RNA–Protein interactions for RNA: ENST00000552516.5

TGFBR1-209, Transcript of transforming growth factor beta receptor 1, humanhuman

TSL 1 (best) BASIC

Gene TGFBR1, Length 5,933 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TGFBR1-209ENST00000552516 ZBTB43O43298 467 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 STX17P56962 302 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 UQCRHLA0A096LP55 91 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 UQCRHP07919 91 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 EEF2KMTQ96G04 330 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 KCNJ14Q9UNX9 436 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 LRRC7Q96NW7 1537 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 ZNF532Q9HCE3 1301 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 QRICH2Q9H0J4 1663 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 TSC1Q92574 1164 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 PRDM10Q9NQV6 1147 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 TTC41PQ6P2S7 1318 aa12.54□□□□□ -0.4
TGFBR1-209ENST00000552516 LMOD1P29536 600 aaPredicted RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 ADD1P35611 737 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 SSRP1Q08945 709 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 WTAPQ15007 396 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 TSR1Q2NL82 804 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 IQCA1Q86XH1 822 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 MAPK8IP1Q9UQF2 711 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 RTCBQ9Y3I0 505 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 NPHP4O75161 1426 aaPredicted RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 KRT18P05783 430 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 CYP2D7A0A087X1C5 515 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 CTCFLQ8NI51 663 aaPredicted RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 CDK5RAP3Q96JB5 506 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 ZSWIM4Q9H7M6 989 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 RAD50Q92878 1312 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 IBTKQ9P2D0 1353 aaPredicted RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 TEX13AQ9BXU3 409 aaPredicted RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 SH3TC1Q8TE82 1336 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 KIDINS220Q9ULH0 1771 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 COBLO75128 1261 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 CNNM3Q8NE01 707 aa12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 SCAND2PQ9GZW5 306 aaPredicted RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 NAT10Q9H0A0 1025 aaKnown RBP12.53□□□□□ -0.4
TGFBR1-209ENST00000552516 PRKAB2O43741 272 aa12.52□□□□□ -0.4
TGFBR1-209ENST00000552516 TANGO6Q9C0B7 1094 aa12.52□□□□□ -0.4
TGFBR1-209ENST00000552516 AATKQ6ZMQ8 1374 aa12.52□□□□□ -0.4
TGFBR1-209ENST00000552516 SHROOM2Q13796 1616 aa12.52□□□□□ -0.4
TGFBR1-209ENST00000552516 TCIRG1Q13488 830 aa12.52□□□□□ -0.4
TGFBR1-209ENST00000552516 TAF6LQ9Y6J9 622 aa12.52□□□□□ -0.4
TGFBR1-209ENST00000552516 RPS6KB1P23443 525 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 HSPA4P34932 840 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 UBE2HP62256 183 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 PDZRN4Q6ZMN7 1036 aaPredicted RBP12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 CLIP2Q9UDT6 1046 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 TCP10Q12799 353 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 SOGA3Q5TF21 947 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 USPL1Q5W0Q7 1092 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 DHX32Q7L7V1 743 aaKnown RBP12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 ZSCAN30Q86W11 494 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 CEP57L1Q8IYX8 460 aa12.52□□□□□ -0.41
TGFBR1-209ENST00000552516 CCDC191Q8NCU4 936 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 USP21Q9UK80 565 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 A0A0G2JLW4 131 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 PTPRMP28827 1452 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 AIFM3Q96NN9 605 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 LMBRD1Q9NUN5 540 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 KBTBD3Q8NAB2 608 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 GPT2Q8TD30 523 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 CCDC43Q96MW1 224 aaKnown RBP12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 UBA5Q9GZZ9 404 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 PTPN12Q05209 780 aaKnown RBP12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 HEATR3Q7Z4Q2 680 aa12.51□□□□□ -0.41
TGFBR1-209ENST00000552516 IFIT1BQ5T764 474 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 LRSAM1Q6UWE0 723 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 CCDC186Q7Z3E2 898 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 MAGEB6P1A0A0J9YX57 407 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 SF3B2Q13435 895 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 ZYXQ15942 572 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 AOPEPQ8N6M6 819 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 HOOK1Q9UJC3 728 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 ATP7BP35670 1465 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 CLTCQ00610 1675 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 ADGRB3O60242 1522 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 IDEP14735 1019 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 LIG1P18858 919 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 CRKLP46109 303 aaKnown RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 TMC6Q7Z403 805 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 CCDC87Q9NVE4 849 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 CATIPQ7Z7H3 387 aa12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 RNF216Q9NWF9 866 aaPredicted RBP12.5□□□□□ -0.41
TGFBR1-209ENST00000552516 LOC102724428A0A0B4J2F2 783 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 NBPF26B4DH59 902 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 E7EWF7 191 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 CDKL5O76039 1030 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 CYP21A2P08686 494 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 TPM1P09493 284 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 SIK1P57059 783 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 NBPF14Q5TI25 921 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 NBPF10Q6P3W6 841 aaKnown RBP12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 NBPF15Q8N660 670 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 PTPRUQ92729 1446 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 JMYQ8N9B5 988 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 ABCA9Q8IUA7 1624 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 FGAP02671 866 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 RTN1Q16799 776 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 TPTE2Q6XPS3 522 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 DHX58Q96C10 678 aa12.49□□□□□ -0.41
TGFBR1-209ENST00000552516 LSG1Q9H089 658 aaKnown RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms