RNA–Protein interactions for RNA: ENST00000552374.6

TMEM116-215, Transcript of transmembrane protein 116, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TMEM116, Length 1,408 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-215ENST00000552374 MXD3Q9BW11 206 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 PGAP2Q9UHJ9 254 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 UTYO14607 1347 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 MED23Q9ULK4 1368 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 LTBP1Q14766 1721 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 TTLL5Q6EMB2 1281 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 CDC37L1Q7L3B6 337 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 PUS3Q9BZE2 481 aaKnown RBP13.73□□□□□ -0.21
TMEM116-215ENST00000552374 ZNF408Q9H9D4 720 aa13.73□□□□□ -0.21
TMEM116-215ENST00000552374 CACNA1FO60840 1977 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 LRRC37AA6NMS7 1700 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 CELF2O95319 508 aaKnown RBP13.72□□□□□ -0.21
TMEM116-215ENST00000552374 USP17L8P0C7I0 530 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 KIF4BQ2VIQ3 1234 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 DEFB115Q30KQ5 88 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 CST9Q5W186 159 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 DLK2Q6UY11 383 aa13.72□□□□□ -0.21
TMEM116-215ENST00000552374 DCPSQ96C86 337 aaKnown RBP13.72□□□□□ -0.21
TMEM116-215ENST00000552374 API5Q9BZZ5 524 aaKnown RBP13.72□□□□□ -0.21
TMEM116-215ENST00000552374 BRPF1P55201 1214 aaPredicted RBP13.71□□□□□ -0.22
TMEM116-215ENST00000552374 GTF2IP78347 998 aa13.71□□□□□ -0.22
TMEM116-215ENST00000552374 SCARF1Q14162 830 aa13.71□□□□□ -0.22
TMEM116-215ENST00000552374 RABL6Q3YEC7 729 aaPredicted RBP13.71□□□□□ -0.22
TMEM116-215ENST00000552374 STRIP1Q5VSL9 837 aa13.71□□□□□ -0.22
TMEM116-215ENST00000552374 ANKRD44Q8N8A2 993 aa13.71□□□□□ -0.22
TMEM116-215ENST00000552374 GMLQ99445 158 aa13.71□□□□□ -0.22
TMEM116-215ENST00000552374 CD209Q9NNX6 404 aa13.71□□□□□ -0.22
TMEM116-215ENST00000552374 BCAR3O75815 825 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 VEGFBP49765 207 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 ZNF280AP59817 542 aaPredicted RBP13.7□□□□□ -0.22
TMEM116-215ENST00000552374 DACT2Q5SW24 774 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 PAXIP1Q6ZW49 1069 aaPredicted RBP13.7□□□□□ -0.22
TMEM116-215ENST00000552374 KRT26Q7Z3Y9 468 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 OGFOD1Q8N543 542 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 KLHDC4Q8TBB5 520 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 FRAT1Q92837 279 aaPredicted RBP13.7□□□□□ -0.22
TMEM116-215ENST00000552374 MYOZ2Q9NPC6 264 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 RIPOR2Q9Y4F9 1068 aa13.7□□□□□ -0.22
TMEM116-215ENST00000552374 UBTFL1P0CB47 393 aaPredicted RBP13.69□□□□□ -0.22
TMEM116-215ENST00000552374 CNTNAP1P78357 1384 aa13.69□□□□□ -0.22
TMEM116-215ENST00000552374 GRM1Q13255 1194 aa13.69□□□□□ -0.22
TMEM116-215ENST00000552374 LRRC24Q50LG9 513 aa13.69□□□□□ -0.22
TMEM116-215ENST00000552374 ZNF804AQ7Z570 1209 aa13.69□□□□□ -0.22
TMEM116-215ENST00000552374 ASTN2O75129 1339 aaPredicted RBP13.68□□□□□ -0.22
TMEM116-215ENST00000552374 IPO8O15397 1037 aaKnown RBP13.68□□□□□ -0.22
TMEM116-215ENST00000552374 METTL24Q5JXM2 366 aa13.68□□□□□ -0.22
TMEM116-215ENST00000552374 C15orf52Q6ZUT6 534 aaKnown RBP13.68□□□□□ -0.22
TMEM116-215ENST00000552374 KIAA0825Q8IV33 1275 aa13.68□□□□□ -0.22
TMEM116-215ENST00000552374 ARHGAP45Q92619 1136 aa13.68□□□□□ -0.22
TMEM116-215ENST00000552374 JAG2Q9Y219 1238 aa13.68□□□□□ -0.22
TMEM116-215ENST00000552374 MROH5Q6ZUA9 1318 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 KIF16BQ96L93 1317 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 RASSF10A6NK89 507 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 ADM5C9JUS6 153 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 HSPA1AP0DMV8 641 aaKnown RBP13.67□□□□□ -0.22
TMEM116-215ENST00000552374 HSPA1BP0DMV9 641 aaKnown RBP13.67□□□□□ -0.22
TMEM116-215ENST00000552374 UBE4AQ14139 1066 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 ANGEL2Q5VTE6 544 aaKnown RBP13.67□□□□□ -0.22
TMEM116-215ENST00000552374 SULF1Q8IWU6 871 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 GGA3Q9NZ52 723 aa13.67□□□□□ -0.22
TMEM116-215ENST00000552374 ADAMTSL1Q8N6G6 1762 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 MYO3BQ8WXR4 1341 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 IRS2Q9Y4H2 1338 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 HIBADHP31937 336 aaKnown RBP13.66□□□□□ -0.22
TMEM116-215ENST00000552374 GYG1P46976 350 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 NBPF9Q3BBW0 867 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 CLUAP1Q96AJ1 413 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 HDAC9Q9UKV0 1011 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 SCAF8Q9UPN6 1271 aaKnown RBP13.66□□□□□ -0.22
TMEM116-215ENST00000552374 HDAC5Q9UQL6 1122 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 LRRFIP2Q9Y608 721 aaKnown RBP13.66□□□□□ -0.22
TMEM116-215ENST00000552374 TLL2Q9Y6L7 1015 aa13.66□□□□□ -0.22
TMEM116-215ENST00000552374 WDR33Q9C0J8 1336 aaKnown RBP13.66□□□□□ -0.22
TMEM116-215ENST00000552374 MYH3P11055 1940 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 F8W031 263 aaPredicted RBP13.65□□□□□ -0.22
TMEM116-215ENST00000552374 IL1R1P14778 569 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 CYP4F22Q6NT55 531 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 SAPCD2Q86UD0 394 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 VPS37DQ86XT2 251 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 FAM84BQ96KN1 310 aaPredicted RBP13.65□□□□□ -0.22
TMEM116-215ENST00000552374 CAPNS2Q96L46 248 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 MEIS3Q99687 375 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 TNNQ9UQP3 1299 aa13.65□□□□□ -0.22
TMEM116-215ENST00000552374 SASH1O94885 1247 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 PDE8BO95263 885 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 TRIM27P14373 513 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 PTPN12Q05209 780 aaKnown RBP13.64□□□□□ -0.23
TMEM116-215ENST00000552374 INTS3Q68E01 1043 aaKnown RBP13.64□□□□□ -0.23
TMEM116-215ENST00000552374 ATF7IPQ6VMQ6 1270 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 SIL1Q9H173 461 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 SCN9AQ15858 1988 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 EYA2O00167 538 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 WNT10BO00744 389 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 FRAT2O75474 233 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-215ENST00000552374 ECE1P42892 770 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 RFX5P48382 616 aaPredicted RBP13.64□□□□□ -0.23
TMEM116-215ENST00000552374 CAVIN4Q5BKX8 364 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 CERS5Q8N5B7 392 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 C2orf69Q8N8R5 385 aa13.64□□□□□ -0.23
TMEM116-215ENST00000552374 IQSEC3Q9UPP2 1182 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 12.8 ms