RNA–Protein interactions for RNA: ENST00000552237.1

USP44-207, Transcript of ubiquitin specific peptidase 44, humanhuman

TSL 3

Gene USP44, Length 463 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP44-207ENST00000552237 SEC31BQ9NQW1 1179 aa7.96□□□□□ -1.14
USP44-207ENST00000552237 FNDC3AQ9Y2H6 1198 aaKnown RBP7.96□□□□□ -1.14
USP44-207ENST00000552237 WDR64B1ANS9 1081 aa7.95□□□□□ -1.14
USP44-207ENST00000552237 DDX3YO15523 660 aaKnown RBP7.95□□□□□ -1.14
USP44-207ENST00000552237 PTPRAP18433 802 aa7.95□□□□□ -1.14
USP44-207ENST00000552237 COL13A1Q5TAT6 717 aaPredicted RBP7.95□□□□□ -1.14
USP44-207ENST00000552237 ANKRD34AQ69YU3 496 aa7.95□□□□□ -1.14
USP44-207ENST00000552237 FDX2Q6P4F2 183 aa7.95□□□□□ -1.14
USP44-207ENST00000552237 PPP1R3FQ6ZSY5 799 aaPredicted RBP7.95□□□□□ -1.14
USP44-207ENST00000552237 GAS2O43903 313 aaKnown RBP7.94□□□□□ -1.14
USP44-207ENST00000552237 EPHA1P21709 976 aa7.94□□□□□ -1.14
USP44-207ENST00000552237 CABP4P57796 275 aa7.94□□□□□ -1.14
USP44-207ENST00000552237 C16orf46Q6P387 395 aa7.94□□□□□ -1.14
USP44-207ENST00000552237 NCAPG2Q86XI2 1143 aa7.94□□□□□ -1.14
USP44-207ENST00000552237 FOXD4L4Q8WXT5 416 aaPredicted RBP7.94□□□□□ -1.14
USP44-207ENST00000552237 RFX1P22670 979 aa7.93□□□□□ -1.14
USP44-207ENST00000552237 PRIMPOLQ96LW4 560 aa7.93□□□□□ -1.14
USP44-207ENST00000552237 RNF208Q9H0X6 261 aa7.93□□□□□ -1.14
USP44-207ENST00000552237 SH2B1Q9NRF2 756 aaPredicted RBP7.93□□□□□ -1.14
USP44-207ENST00000552237 ADGRE2Q9UHX3 823 aa7.93□□□□□ -1.14
USP44-207ENST00000552237 HIF3AQ9Y2N7 669 aa7.93□□□□□ -1.14
USP44-207ENST00000552237 PREPP48147 710 aa7.92□□□□□ -1.14
USP44-207ENST00000552237 LCE1DQ5T752 114 aa7.92□□□□□ -1.14
USP44-207ENST00000552237 FNBP4Q8N3X1 1017 aaPredicted RBP7.92□□□□□ -1.14
USP44-207ENST00000552237 MFSD14AQ96MC6 490 aa7.92□□□□□ -1.14
USP44-207ENST00000552237 PBX4Q9BYU1 374 aa7.92□□□□□ -1.14
USP44-207ENST00000552237 ATG3Q9NT62 314 aa7.92□□□□□ -1.14
USP44-207ENST00000552237 PIM2Q9P1W9 311 aa7.92□□□□□ -1.14
USP44-207ENST00000552237 PRMT3O60678 531 aa7.91□□□□□ -1.14
USP44-207ENST00000552237 ADAM11O75078 769 aa7.91□□□□□ -1.14
USP44-207ENST00000552237 NLRP12P59046 1061 aa7.91□□□□□ -1.14
USP44-207ENST00000552237 KLHDC7BQ96G42 594 aa7.91□□□□□ -1.14
USP44-207ENST00000552237 RUSC1Q9BVN2 902 aa7.91□□□□□ -1.14
USP44-207ENST00000552237 ABI2Q9NYB9 513 aaPredicted RBP7.91□□□□□ -1.14
USP44-207ENST00000552237 LEMD3Q9Y2U8 911 aa7.91□□□□□ -1.14
USP44-207ENST00000552237 H3BRJ5 948 aa7.9□□□□□ -1.14
USP44-207ENST00000552237 KIF4AO95239 1232 aa7.9□□□□□ -1.14
USP44-207ENST00000552237 RXRBP28702 533 aa7.9□□□□□ -1.14
USP44-207ENST00000552237 HOXA10P31260 410 aaPredicted RBP7.9□□□□□ -1.14
USP44-207ENST00000552237 PIP4K2BP78356 416 aa7.9□□□□□ -1.14
USP44-207ENST00000552237 ABI1Q8IZP0 508 aa7.9□□□□□ -1.14
USP44-207ENST00000552237 SAP130Q9H0E3 1048 aa7.9□□□□□ -1.14
USP44-207ENST00000552237 NOVA2Q9UNW9 492 aaKnown RBP7.9□□□□□ -1.14
USP44-207ENST00000552237 ZAP70P43403 619 aa7.89□□□□□ -1.15
USP44-207ENST00000552237 FBXL6Q8N531 539 aa7.89□□□□□ -1.15
USP44-207ENST00000552237 GPR152Q8TDT2 470 aa7.89□□□□□ -1.15
USP44-207ENST00000552237 SLC7A3Q8WY07 619 aa7.89□□□□□ -1.15
USP44-207ENST00000552237 WNT8BQ93098 351 aa7.89□□□□□ -1.15
USP44-207ENST00000552237 OSBPL1AQ9BXW6 950 aa7.89□□□□□ -1.15
USP44-207ENST00000552237 TM4SF5O14894 197 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 ARL4DP49703 201 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 SWI5Q1ZZU3 235 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 CDCA8Q53HL2 280 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 ADAMTSL4Q6UY14 1074 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 MKNK1Q9BUB5 465 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 KRTAP4-7Q9BYR0 210 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 OSGEPQ9NPF4 335 aa7.88□□□□□ -1.15
USP44-207ENST00000552237 CYP2E1P05181 493 aaPredicted RBP7.87□□□□□ -1.15
USP44-207ENST00000552237 MAP4P27816 1152 aaKnown RBP7.87□□□□□ -1.15
USP44-207ENST00000552237 OGFOD2Q6N063 350 aa7.87□□□□□ -1.15
USP44-207ENST00000552237 TP53INP2Q8IXH6 220 aa7.87□□□□□ -1.15
USP44-207ENST00000552237 POP1Q99575 1024 aaKnown RBP7.87□□□□□ -1.15
USP44-207ENST00000552237 ADAM19Q9H013 955 aa7.87□□□□□ -1.15
USP44-207ENST00000552237 ACIN1Q9UKV3 1341 aaKnown RBP7.86□□□□□ -1.15
USP44-207ENST00000552237 CEP120Q8N960 986 aa7.86□□□□□ -1.15
USP44-207ENST00000552237 ASIC4Q96FT7 647 aa7.86□□□□□ -1.15
USP44-207ENST00000552237 KANSL3Q9P2N6 904 aa7.86□□□□□ -1.15
USP44-207ENST00000552237 NAA30Q147X3 362 aaPredicted RBP7.85□□□□□ -1.15
USP44-207ENST00000552237 SGO2Q562F6 1265 aa7.85□□□□□ -1.15
USP44-207ENST00000552237 FAM26DQ5JW98 314 aa7.85□□□□□ -1.15
USP44-207ENST00000552237 NUTM2GQ5VZR2 741 aa7.85□□□□□ -1.15
USP44-207ENST00000552237 COL26A1Q96A83 441 aa7.85□□□□□ -1.15
USP44-207ENST00000552237 FBXL18Q96ME1 805 aa7.85□□□□□ -1.15
USP44-207ENST00000552237 ZMYND15Q9H091 742 aa7.85□□□□□ -1.15
USP44-207ENST00000552237 TNFRSF10BO14763 440 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 FOSL1P15407 271 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 JAG1P78504 1218 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 CPSF6Q16630 551 aaKnown RBP eCLIP7.84□□□□□ -1.15
USP44-207ENST00000552237 ZNF438Q7Z4V0 828 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 VSIG10LQ86VR7 867 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 ABTB2Q8N961 1025 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 C12orf50Q8NA57 414 aaPredicted RBP7.84□□□□□ -1.15
USP44-207ENST00000552237 CCDC39Q9UFE4 941 aa7.84□□□□□ -1.15
USP44-207ENST00000552237 NFKBIBQ15653 356 aa7.83□□□□□ -1.16
USP44-207ENST00000552237 CFAP70Q5T0N1 1121 aa7.83□□□□□ -1.16
USP44-207ENST00000552237 METTL22Q9BUU2 404 aaPredicted RBP7.83□□□□□ -1.16
USP44-207ENST00000552237 ELP3Q9H9T3 547 aa7.83□□□□□ -1.16
USP44-207ENST00000552237 F13BP05160 661 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 USP11P51784 963 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 C19orf57Q0VDD7 668 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 OCLNQ16625 522 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 MSMPQ1L6U9 139 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 PDE12Q6L8Q7 609 aaKnown RBP7.82□□□□□ -1.16
USP44-207ENST00000552237 PAOXQ6QHF9 649 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 USP26Q9BXU7 913 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 CYP4F12Q9HCS2 524 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 TMEM63CQ9P1W3 806 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 STIM2Q9P246 746 aa7.82□□□□□ -1.16
USP44-207ENST00000552237 FAM95CA0A1B0GW59 222 aa7.81□□□□□ -1.16
USP44-207ENST00000552237 MEGF11A6BM72 1044 aa7.81□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms