RNA–Protein interactions for RNA: ENST00000552199.5

RAB3IP-216, Transcript of RAB3A interacting protein, humanhuman

TSL 1 (best)

Gene RAB3IP, Length 1,905 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-216ENST00000552199 MBD3O95983 291 aa16.67■□□□□ 0.26
RAB3IP-216ENST00000552199 HMGB1P09429 215 aaKnown RBP16.67■□□□□ 0.26
RAB3IP-216ENST00000552199 MCAMP43121 646 aa16.67■□□□□ 0.26
RAB3IP-216ENST00000552199 ZNF445P59923 1031 aa16.67■□□□□ 0.26
RAB3IP-216ENST00000552199 NIP7Q9Y221 180 aaKnown RBP eCLIP16.67■□□□□ 0.26
RAB3IP-216ENST00000552199 TCHHQ07283 1943 aa16.67■□□□□ 0.26
RAB3IP-216ENST00000552199 NTSR2O95665 410 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 F13A1P00488 732 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 HSP90B1P14625 803 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 PI16Q6UXB8 463 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 FNBP4Q8N3X1 1017 aaPredicted RBP16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 MTMR6Q9Y217 621 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 LAMB2P55268 1798 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 BCORQ6W2J9 1755 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 PDIA4P13667 645 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 FGFR2P21802 821 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 PUM3Q15397 648 aaKnown RBP16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 WASHC4Q2M389 1173 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 ZSCAN23Q3MJ62 389 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 FOXD4L6Q3SYB3 417 aaPredicted RBP16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 FOXD4L3Q6VB84 417 aaPredicted RBP16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 Q6ZUG5 572 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 LPIN2Q92539 896 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 APPBP2Q92624 585 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 ZNF652Q9Y2D9 606 aa16.66■□□□□ 0.26
RAB3IP-216ENST00000552199 ARAP2Q8WZ64 1704 aa16.65■□□□□ 0.26
RAB3IP-216ENST00000552199 DHX32Q7L7V1 743 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-216ENST00000552199 LINC00116Q8NCU8 138 aa16.65■□□□□ 0.26
RAB3IP-216ENST00000552199 NSFL1CQ9UNZ2 370 aaKnown RBP16.65■□□□□ 0.26
RAB3IP-216ENST00000552199 ATP6V1DQ9Y5K8 247 aa16.65■□□□□ 0.26
RAB3IP-216ENST00000552199 RTL9Q8NET4 1388 aa16.65■□□□□ 0.26
RAB3IP-216ENST00000552199 DTNBO60941 627 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 UQCRFS1P1P0C7P4 283 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 ARID4AP29374 1257 aaPredicted RBP16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 TTF1Q15361 905 aaPredicted RBP16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 CCDC102BQ68D86 513 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 CLEC4GQ6UXB4 293 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 USP48Q86UV5 1035 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 TMEM87AQ8NBN3 555 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 HELBQ8NG08 1087 aaPredicted RBP16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 PANK2Q9BZ23 570 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 DDX24Q9GZR7 859 aaKnown RBP eCLIP16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 SEC31BQ9NQW1 1179 aa16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 RBM27Q9P2N5 1060 aaKnown RBP16.64■□□□□ 0.26
RAB3IP-216ENST00000552199 E7EWF7 191 aa16.64■□□□□ 0.25
RAB3IP-216ENST00000552199 PHKA1P46020 1223 aa16.64■□□□□ 0.25
RAB3IP-216ENST00000552199 ZSCAN25Q6NSZ9 544 aa16.64■□□□□ 0.25
RAB3IP-216ENST00000552199 MPHOSPH8Q99549 860 aa16.64■□□□□ 0.25
RAB3IP-216ENST00000552199 CTNNA3Q9UI47 895 aa16.64■□□□□ 0.25
RAB3IP-216ENST00000552199 A0A0G2JLW4 131 aa16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 PDCP20941 246 aa16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 EXOSC10Q01780 885 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 STK3Q13188 491 aa16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 LARP1BQ659C4 914 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 PUS7LQ9H0K6 701 aaKnown RBP16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 GDPD2Q9HCC8 539 aa16.63■□□□□ 0.25
RAB3IP-216ENST00000552199 FOXP2O15409 715 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 SLC5A1P13866 664 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 ADD2P35612 726 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 GTF3C6Q969F1 213 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 TMEM63CQ9P1W3 806 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 CNTNAP4Q9C0A0 1308 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 TTLL5Q6EMB2 1281 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 BRF1Q92994 677 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 PIH1D3Q9NQM4 214 aaKnown RBP16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 CNPY2Q9Y2B0 182 aa16.62■□□□□ 0.25
RAB3IP-216ENST00000552199 MYO5AQ9Y4I1 1855 aaKnown RBP16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 VPS37CA5D8V6 355 aaPredicted RBP16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 GADD45BO75293 160 aaPredicted RBP16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 IGHMBP2P38935 993 aaKnown RBP16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 LRRC2Q9BYS8 371 aa16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 AGXT2Q9BYV1 514 aa16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 USP21Q9UK80 565 aa16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 SPATA31A6Q5VVP1 1343 aa16.61■□□□□ 0.25
RAB3IP-216ENST00000552199 RGL2O15211 777 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 GPAA1O43292 621 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 FGAP02671 866 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 FGD1P98174 961 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 SLC9C2Q5TAH2 1124 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 PTF1AQ7RTS3 328 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 ATRNO75882 1429 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 KCNQ4P56696 695 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 UBE3CQ15386 1083 aa16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 IMMTQ16891 758 aaKnown RBP16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 RC3H1Q5TC82 1133 aaKnown RBP16.6■□□□□ 0.25
RAB3IP-216ENST00000552199 BTAF1O14981 1849 aa16.59■□□□□ 0.25
RAB3IP-216ENST00000552199 THSD7AQ9UPZ6 1657 aa16.59■□□□□ 0.25
RAB3IP-216ENST00000552199 PFKFB2O60825 505 aa16.59■□□□□ 0.25
RAB3IP-216ENST00000552199 IDH1O75874 414 aaKnown RBP16.58■□□□□ 0.25
RAB3IP-216ENST00000552199 SPATA5Q8NB90 893 aa16.58■□□□□ 0.25
RAB3IP-216ENST00000552199 SNAP23O00161 211 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 DNM1Q05193 864 aaKnown RBP16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 APOBRQ0VD83 1088 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 SCRN1Q12765 414 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 ERFEQ4G0M1 354 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 CDC37L1Q7L3B6 337 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 FBXL16Q8N461 479 aa16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 SYAP1Q96A49 352 aaPredicted RBP16.58■□□□□ 0.24
RAB3IP-216ENST00000552199 LLPHQ9BRT6 129 aaKnown RBP16.58■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms