RNA–Protein interactions for RNA: ENST00000551716.5

CACNB3-220, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 3

Gene CACNB3, Length 544 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-220ENST00000551716 PTPN22Q9Y2R2 807 aa19.89■□□□□ 0.77
CACNB3-220ENST00000551716 ZBTB48P10074 688 aaPredicted RBP19.88■□□□□ 0.77
CACNB3-220ENST00000551716 STRIP1Q5VSL9 837 aa19.88■□□□□ 0.77
CACNB3-220ENST00000551716 ARMC5Q96C12 935 aa19.88■□□□□ 0.77
CACNB3-220ENST00000551716 PDE8AO60658 829 aa19.87■□□□□ 0.77
CACNB3-220ENST00000551716 TMPOP42166 694 aaKnown RBP19.87■□□□□ 0.77
CACNB3-220ENST00000551716 DACT2Q5SW24 774 aa19.87■□□□□ 0.77
CACNB3-220ENST00000551716 RIC3Q7Z5B4 369 aa19.87■□□□□ 0.77
CACNB3-220ENST00000551716 ANGEL1Q9UNK9 670 aaKnown RBP19.87■□□□□ 0.77
CACNB3-220ENST00000551716 PRKG1Q13976 671 aa19.86■□□□□ 0.77
CACNB3-220ENST00000551716 ARHGEF6Q15052 776 aa19.86■□□□□ 0.77
CACNB3-220ENST00000551716 CCDC191Q8NCU4 936 aa19.86■□□□□ 0.77
CACNB3-220ENST00000551716 PPP1R12BO60237 982 aaPredicted RBP19.85■□□□□ 0.77
CACNB3-220ENST00000551716 EN2P19622 333 aaPredicted RBP19.85■□□□□ 0.77
CACNB3-220ENST00000551716 GOLGA2Q08379 1002 aa19.85■□□□□ 0.77
CACNB3-220ENST00000551716 CDC5LQ99459 802 aaKnown RBP19.85■□□□□ 0.77
CACNB3-220ENST00000551716 COA1Q9GZY4 146 aa19.85■□□□□ 0.77
CACNB3-220ENST00000551716 EFCC1Q9HA90 598 aa19.85■□□□□ 0.77
CACNB3-220ENST00000551716 MED23Q9ULK4 1368 aa19.84■□□□□ 0.77
CACNB3-220ENST00000551716 PCCAP05165 728 aaPredicted RBP19.84■□□□□ 0.77
CACNB3-220ENST00000551716 MAP3K11Q16584 847 aa19.84■□□□□ 0.77
CACNB3-220ENST00000551716 KRT24Q2M2I5 525 aa19.84■□□□□ 0.77
CACNB3-220ENST00000551716 NBPF11Q86T75 865 aa19.84■□□□□ 0.77
CACNB3-220ENST00000551716 MKI67P46013 3256 aaKnown RBP19.83■□□□□ 0.77
CACNB3-220ENST00000551716 FBXW7Q969H0 707 aa19.83■□□□□ 0.77
CACNB3-220ENST00000551716 COLQQ9Y215 455 aaPredicted RBP19.83■□□□□ 0.77
CACNB3-220ENST00000551716 LAS1LQ9Y4W2 734 aaKnown RBP19.83■□□□□ 0.77
CACNB3-220ENST00000551716 KIAA0100Q14667 2235 aaKnown RBP19.82■□□□□ 0.76
CACNB3-220ENST00000551716 SASH1O94885 1247 aa19.82■□□□□ 0.76
CACNB3-220ENST00000551716 SP3Q02447 781 aa19.82■□□□□ 0.76
CACNB3-220ENST00000551716 DEFB129Q9H1M3 183 aa19.82■□□□□ 0.76
CACNB3-220ENST00000551716 BSDC1Q9NW68 430 aaPredicted RBP19.82■□□□□ 0.76
CACNB3-220ENST00000551716 PPP2R3BQ9Y5P8 575 aa19.82■□□□□ 0.76
CACNB3-220ENST00000551716 COL4A1P02462 1669 aa19.81■□□□□ 0.76
CACNB3-220ENST00000551716 SUPT20HL1Q3ZLR7 823 aa19.81■□□□□ 0.76
CACNB3-220ENST00000551716 TTLL5Q6EMB2 1281 aa19.81■□□□□ 0.76
CACNB3-220ENST00000551716 WNK4Q96J92 1243 aa19.81■□□□□ 0.76
CACNB3-220ENST00000551716 MXD3Q9BW11 206 aa19.81■□□□□ 0.76
CACNB3-220ENST00000551716 CWC25Q9NXE8 425 aaPredicted RBP19.81■□□□□ 0.76
CACNB3-220ENST00000551716 IGF2BP3O00425 579 aaKnown RBP eCLIP19.8■□□□□ 0.76
CACNB3-220ENST00000551716 CCT4P50991 539 aaKnown RBP19.8■□□□□ 0.76
CACNB3-220ENST00000551716 CD99L2Q8TCZ2 262 aa19.8■□□□□ 0.76
CACNB3-220ENST00000551716 ZBED3Q96IU2 234 aaPredicted RBP19.8■□□□□ 0.76
CACNB3-220ENST00000551716 CCDC85AQ96PX6 553 aaPredicted RBP19.8■□□□□ 0.76
CACNB3-220ENST00000551716 MINPP1Q9UNW1 487 aa19.8■□□□□ 0.76
CACNB3-220ENST00000551716 LEMD3Q9Y2U8 911 aa19.8■□□□□ 0.76
CACNB3-220ENST00000551716 COL1A1P02452 1464 aaPredicted RBP19.79■□□□□ 0.76
CACNB3-220ENST00000551716 CRHR2Q13324 411 aa19.79■□□□□ 0.76
CACNB3-220ENST00000551716 DUSP27Q5VZP5 1158 aa19.79■□□□□ 0.76
CACNB3-220ENST00000551716 MYD88Q99836 296 aa19.79■□□□□ 0.76
CACNB3-220ENST00000551716 PSME4Q14997 1843 aa19.79■□□□□ 0.76
CACNB3-220ENST00000551716 DLGAP5Q15398 846 aa19.78■□□□□ 0.76
CACNB3-220ENST00000551716 KIAA0825Q8IV33 1275 aa19.78■□□□□ 0.76
CACNB3-220ENST00000551716 ZNF333Q96JL9 665 aa19.78■□□□□ 0.76
CACNB3-220ENST00000551716 CHMP4AQ9BY43 222 aa19.78■□□□□ 0.76
CACNB3-220ENST00000551716 IREB2P48200 963 aaKnown RBP19.77■□□□□ 0.76
CACNB3-220ENST00000551716 NEUROD2Q15784 382 aa19.77■□□□□ 0.76
CACNB3-220ENST00000551716 HTTP42858 3142 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 TESPA1A2RU30 521 aaPredicted RBP19.76■□□□□ 0.75
CACNB3-220ENST00000551716 MYO1BO43795 1136 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 DDX58O95786 925 aaKnown RBP19.76■□□□□ 0.75
CACNB3-220ENST00000551716 CTSWP56202 376 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 SLC4A8Q2Y0W8 1093 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 SLC9C1Q4G0N8 1177 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 MTMR14Q8NCE2 650 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 CLMNQ96JQ2 1002 aa19.76■□□□□ 0.75
CACNB3-220ENST00000551716 ZBTB4Q9P1Z0 1013 aaPredicted RBP19.76■□□□□ 0.75
CACNB3-220ENST00000551716 WTIPA6NIX2 430 aaPredicted RBP19.75■□□□□ 0.75
CACNB3-220ENST00000551716 ANKRD2Q9GZV1 360 aa19.75■□□□□ 0.75
CACNB3-220ENST00000551716 H0YGN5 161 aa19.74■□□□□ 0.75
CACNB3-220ENST00000551716 GTF2IP78347 998 aa19.74■□□□□ 0.75
CACNB3-220ENST00000551716 ANKRD13AQ8IZ07 590 aa19.74■□□□□ 0.75
CACNB3-220ENST00000551716 TTLL11Q8NHH1 800 aa19.74■□□□□ 0.75
CACNB3-220ENST00000551716 JARID2Q92833 1246 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-220ENST00000551716 METTL22Q9BUU2 404 aaPredicted RBP19.74■□□□□ 0.75
CACNB3-220ENST00000551716 FZD1Q9UP38 647 aa19.74■□□□□ 0.75
CACNB3-220ENST00000551716 RBBP6Q7Z6E9 1792 aaKnown RBP19.74■□□□□ 0.75
CACNB3-220ENST00000551716 WDHD1O75717 1129 aaPredicted RBP19.73■□□□□ 0.75
CACNB3-220ENST00000551716 OTUD5Q96G74 571 aa19.73■□□□□ 0.75
CACNB3-220ENST00000551716 PHAXQ9H814 394 aaKnown RBP19.73■□□□□ 0.75
CACNB3-220ENST00000551716 TRIM35Q9UPQ4 493 aa19.73■□□□□ 0.75
CACNB3-220ENST00000551716 ZNF804BA4D1E1 1349 aa19.73■□□□□ 0.75
CACNB3-220ENST00000551716 IGHMBP2P38935 993 aaKnown RBP19.72■□□□□ 0.75
CACNB3-220ENST00000551716 PTPN18Q99952 460 aa19.72■□□□□ 0.75
CACNB3-220ENST00000551716 ZFYVE28Q9HCC9 887 aa19.72■□□□□ 0.75
CACNB3-220ENST00000551716 CENPFP49454 3210 aa19.71■□□□□ 0.75
CACNB3-220ENST00000551716 USP2O75604 605 aaPredicted RBP19.71■□□□□ 0.75
CACNB3-220ENST00000551716 TXNRD3Q86VQ6 643 aa19.71■□□□□ 0.75
CACNB3-220ENST00000551716 GREM2Q9H772 168 aa19.71■□□□□ 0.75
CACNB3-220ENST00000551716 RUNDC1Q96C34 613 aa19.7■□□□□ 0.74
CACNB3-220ENST00000551716 TRIOBPQ9H2D6 2365 aa19.7■□□□□ 0.74
CACNB3-220ENST00000551716 CEP290O15078 2479 aa19.69■□□□□ 0.74
CACNB3-220ENST00000551716 DLL1O00548 723 aa19.69■□□□□ 0.74
CACNB3-220ENST00000551716 GNRH1P01148 92 aa19.69■□□□□ 0.74
CACNB3-220ENST00000551716 KCNJ4P48050 445 aa19.69■□□□□ 0.74
CACNB3-220ENST00000551716 NBPF12Q5TAG4 269 aaPredicted RBP19.69■□□□□ 0.74
CACNB3-220ENST00000551716 CD209Q9NNX6 404 aa19.69■□□□□ 0.74
CACNB3-220ENST00000551716 PTCH2Q9Y6C5 1203 aa19.69■□□□□ 0.74
CACNB3-220ENST00000551716 GJA5P36382 358 aa19.68■□□□□ 0.74
CACNB3-220ENST00000551716 GTF2A2P52657 109 aa19.68■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms