RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 TLL2Q9Y6L7 1015 aa21.69■■□□□ 1.06
CDK4-208ENST00000551706 PDE4DIPQ5VU43 2346 aa21.69■■□□□ 1.06
CDK4-208ENST00000551706 AOC2O75106 756 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 UFL1O94874 794 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 ATP2B4P23634 1241 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 WASHC4Q2M389 1173 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 CST9Q5W186 159 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.68■■□□□ 1.06
CDK4-208ENST00000551706 POLLQ9UGP5 575 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 GJA3Q9Y6H8 435 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 TRPM7Q96QT4 1865 aa21.68■■□□□ 1.06
CDK4-208ENST00000551706 DUOX1Q9NRD9 1551 aa21.67■■□□□ 1.06
CDK4-208ENST00000551706 LDHAL6AQ6ZMR3 332 aa21.67■■□□□ 1.06
CDK4-208ENST00000551706 LRRFIP2Q9Y608 721 aaKnown RBP21.67■■□□□ 1.06
CDK4-208ENST00000551706 EIF6P56537 245 aaKnown RBP21.66■■□□□ 1.06
CDK4-208ENST00000551706 DGKZQ13574 1117 aa21.66■■□□□ 1.06
CDK4-208ENST00000551706 ZC3H12CQ9C0D7 883 aaKnown RBP21.66■■□□□ 1.06
CDK4-208ENST00000551706 CNNM1Q9NRU3 951 aa21.66■■□□□ 1.06
CDK4-208ENST00000551706 LEMD3Q9Y2U8 911 aa21.66■■□□□ 1.06
CDK4-208ENST00000551706 CASP8AP2Q9UKL3 1982 aa21.66■■□□□ 1.06
CDK4-208ENST00000551706 TRAF5O00463 557 aa21.65■■□□□ 1.06
CDK4-208ENST00000551706 CHRNDQ07001 517 aa21.65■■□□□ 1.06
CDK4-208ENST00000551706 ITPRIPQ8IWB1 547 aa21.65■■□□□ 1.06
CDK4-208ENST00000551706 ZNF594Q96JF6 807 aaPredicted RBP21.65■■□□□ 1.06
CDK4-208ENST00000551706 GNAI2P04899 355 aa21.64■■□□□ 1.05
CDK4-208ENST00000551706 RLBP1P12271 317 aa21.64■■□□□ 1.05
CDK4-208ENST00000551706 EPS15P42566 896 aa21.64■■□□□ 1.05
CDK4-208ENST00000551706 USP50Q70EL3 339 aaPredicted RBP21.64■■□□□ 1.05
CDK4-208ENST00000551706 ZNRF3Q9ULT6 936 aa21.64■■□□□ 1.05
CDK4-208ENST00000551706 SCNN1DP51172 638 aa21.63■■□□□ 1.05
CDK4-208ENST00000551706 RIMBP2O15034 1052 aa21.62■■□□□ 1.05
CDK4-208ENST00000551706 KCNJ4P48050 445 aa21.62■■□□□ 1.05
CDK4-208ENST00000551706 SAPCD2Q86UD0 394 aa21.62■■□□□ 1.05
CDK4-208ENST00000551706 PANK1Q8TE04 598 aa21.62■■□□□ 1.05
CDK4-208ENST00000551706 COL4A5P29400 1685 aa21.62■■□□□ 1.05
CDK4-208ENST00000551706 ZNF804BA4D1E1 1349 aa21.61■■□□□ 1.05
CDK4-208ENST00000551706 G3V3G9 751 aa21.61■■□□□ 1.05
CDK4-208ENST00000551706 DCAF8Q5TAQ9 597 aa21.61■■□□□ 1.05
CDK4-208ENST00000551706 MED23Q9ULK4 1368 aa21.61■■□□□ 1.05
CDK4-208ENST00000551706 MROH5Q6ZUA9 1318 aa21.6■■□□□ 1.05
CDK4-208ENST00000551706 ZBTB7BO15156 539 aaPredicted RBP21.6■■□□□ 1.05
CDK4-208ENST00000551706 MTX1Q13505 466 aa21.6■■□□□ 1.05
CDK4-208ENST00000551706 PDE3AQ14432 1141 aa21.6■■□□□ 1.05
CDK4-208ENST00000551706 FBXO3Q9UK99 471 aa21.6■■□□□ 1.05
CDK4-208ENST00000551706 RIPOR2Q9Y4F9 1068 aa21.6■■□□□ 1.05
CDK4-208ENST00000551706 SPEF2Q9C093 1822 aa21.59■■□□□ 1.05
CDK4-208ENST00000551706 PLIN1O60240 522 aa21.59■■□□□ 1.05
CDK4-208ENST00000551706 RFX5P48382 616 aaPredicted RBP21.59■■□□□ 1.05
CDK4-208ENST00000551706 HHIPL1Q96JK4 782 aa21.59■■□□□ 1.05
CDK4-208ENST00000551706 CHMP4BQ9H444 224 aaKnown RBP21.59■■□□□ 1.05
CDK4-208ENST00000551706 CELF2O95319 508 aaKnown RBP21.58■■□□□ 1.05
CDK4-208ENST00000551706 PTPN12Q05209 780 aaKnown RBP21.58■■□□□ 1.05
CDK4-208ENST00000551706 TNIP1Q15025 636 aa21.58■■□□□ 1.05
CDK4-208ENST00000551706 PUS3Q9BZE2 481 aaKnown RBP21.58■■□□□ 1.05
CDK4-208ENST00000551706 DBNDD1Q9H9R9 158 aa21.58■■□□□ 1.05
CDK4-208ENST00000551706 DDX19BQ9UMR2 479 aa21.58■■□□□ 1.05
CDK4-208ENST00000551706 SRGAP3O43295 1099 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 ECE2O60344 883 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 TAF5LO75529 589 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 CXCL9Q07325 125 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 MVPQ14764 893 aaKnown RBP21.57■■□□□ 1.04
CDK4-208ENST00000551706 DOK7Q18PE1 504 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 CIAPIN1Q6FI81 312 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 HELBQ8NG08 1087 aaPredicted RBP21.57■■□□□ 1.04
CDK4-208ENST00000551706 KLHDC4Q8TBB5 520 aa21.57■■□□□ 1.04
CDK4-208ENST00000551706 YDJCA8MPS7 323 aa21.56■■□□□ 1.04
CDK4-208ENST00000551706 EYA2O00167 538 aa21.56■■□□□ 1.04
CDK4-208ENST00000551706 LRRC24Q50LG9 513 aa21.56■■□□□ 1.04
CDK4-208ENST00000551706 METTL24Q5JXM2 366 aa21.56■■□□□ 1.04
CDK4-208ENST00000551706 C15orf52Q6ZUT6 534 aaKnown RBP21.56■■□□□ 1.04
CDK4-208ENST00000551706 PODNQ7Z5L7 613 aa21.56■■□□□ 1.04
CDK4-208ENST00000551706 COPRSQ9NQ92 184 aa21.56■■□□□ 1.04
CDK4-208ENST00000551706 WTIPA6NIX2 430 aaPredicted RBP21.55■■□□□ 1.04
CDK4-208ENST00000551706 CIAO1O76071 339 aa21.55■■□□□ 1.04
CDK4-208ENST00000551706 UBE4AQ14139 1066 aa21.55■■□□□ 1.04
CDK4-208ENST00000551706 COA1Q9GZY4 146 aa21.55■■□□□ 1.04
CDK4-208ENST00000551706 ADARB2Q9NS39 739 aaKnown RBP21.55■■□□□ 1.04
CDK4-208ENST00000551706 RAD17O75943 681 aa21.54■■□□□ 1.04
CDK4-208ENST00000551706 COG6Q9Y2V7 657 aa21.54■■□□□ 1.04
CDK4-208ENST00000551706 PDE8BO95263 885 aa21.53■■□□□ 1.04
CDK4-208ENST00000551706 SOX10P56693 466 aa21.53■■□□□ 1.04
CDK4-208ENST00000551706 PRPF38BQ5VTL8 546 aaKnown RBP21.53■■□□□ 1.04
CDK4-208ENST00000551706 GPRC5DQ9NZD1 345 aa21.53■■□□□ 1.04
CDK4-208ENST00000551706 IL15P40933 162 aaPredicted RBP21.52■■□□□ 1.04
CDK4-208ENST00000551706 NOGQ13253 232 aa21.52■■□□□ 1.04
CDK4-208ENST00000551706 VGLL2Q8N8G2 317 aa21.52■■□□□ 1.04
CDK4-208ENST00000551706 GLIS2Q9BZE0 524 aaPredicted RBP21.52■■□□□ 1.04
CDK4-208ENST00000551706 SIL1Q9H173 461 aa21.52■■□□□ 1.04
CDK4-208ENST00000551706 SNAP23O00161 211 aa21.51■■□□□ 1.03
CDK4-208ENST00000551706 ATP8B2P98198 1209 aa21.51■■□□□ 1.03
CDK4-208ENST00000551706 ATG9AQ7Z3C6 839 aa21.51■■□□□ 1.03
CDK4-208ENST00000551706 ZNF804AQ7Z570 1209 aa21.51■■□□□ 1.03
CDK4-208ENST00000551706 TXNRD3Q86VQ6 643 aa21.51■■□□□ 1.03
CDK4-208ENST00000551706 IRS2Q9Y4H2 1338 aa21.51■■□□□ 1.03
CDK4-208ENST00000551706 PNMA6EA0A0J9YXQ4 647 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 PSMD14O00487 310 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 RPS12P25398 132 aaKnown RBP21.5■■□□□ 1.03
CDK4-208ENST00000551706 KLRK1P26718 216 aa21.5■■□□□ 1.03
CDK4-208ENST00000551706 RRP1P56182 461 aaKnown RBP21.5■■□□□ 1.03
CDK4-208ENST00000551706 PUM3Q15397 648 aaKnown RBP21.5■■□□□ 1.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.8 ms