RNA–Protein interactions for RNA: ENST00000551497.1

SMARCD1-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 4

Gene SMARCD1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-211ENST00000551497 IRX6P78412 446 aaPredicted RBP18.82■□□□□ 0.6
SMARCD1-211ENST00000551497 G3BP1Q13283 466 aaKnown RBP eCLIP18.82■□□□□ 0.6
SMARCD1-211ENST00000551497 A0A1B0GUL6 1792 aa18.82■□□□□ 0.6
SMARCD1-211ENST00000551497 TIAM2Q8IVF5 1701 aa18.82■□□□□ 0.6
SMARCD1-211ENST00000551497 MED23Q9ULK4 1368 aa18.81■□□□□ 0.6
SMARCD1-211ENST00000551497 SASH1O94885 1247 aa18.81■□□□□ 0.6
SMARCD1-211ENST00000551497 TFCP2Q12800 502 aa18.81■□□□□ 0.6
SMARCD1-211ENST00000551497 C15orf52Q6ZUT6 534 aaKnown RBP18.81■□□□□ 0.6
SMARCD1-211ENST00000551497 PCDHB15Q9Y5E8 787 aa18.81■□□□□ 0.6
SMARCD1-211ENST00000551497 GJA3Q9Y6H8 435 aa18.81■□□□□ 0.6
SMARCD1-211ENST00000551497 FGFR2P21802 821 aa18.8■□□□□ 0.6
SMARCD1-211ENST00000551497 GYG1P46976 350 aa18.8■□□□□ 0.6
SMARCD1-211ENST00000551497 EXOC6Q8TAG9 804 aa18.8■□□□□ 0.6
SMARCD1-211ENST00000551497 RRAGCQ9HB90 399 aa18.8■□□□□ 0.6
SMARCD1-211ENST00000551497 NMRK2Q9NPI5 230 aa18.8■□□□□ 0.6
SMARCD1-211ENST00000551497 NOP58Q9Y2X3 529 aaKnown RBP18.8■□□□□ 0.6
SMARCD1-211ENST00000551497 TIMM10P62072 90 aa18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 PUM3Q15397 648 aaKnown RBP18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 CIAPIN1Q6FI81 312 aa18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 FAM84BQ96KN1 310 aaPredicted RBP18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 COA1Q9GZY4 146 aa18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 CD209Q9NNX6 404 aa18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 EXOC6BQ9Y2D4 811 aa18.79■□□□□ 0.6
SMARCD1-211ENST00000551497 KDM2BQ8NHM5 1336 aa18.78■□□□□ 0.6
SMARCD1-211ENST00000551497 POTECB2RU33 542 aa18.78■□□□□ 0.6
SMARCD1-211ENST00000551497 OS9Q13438 667 aaPredicted RBP18.78■□□□□ 0.6
SMARCD1-211ENST00000551497 PODNQ7Z5L7 613 aa18.78■□□□□ 0.6
SMARCD1-211ENST00000551497 GPC2Q8N158 579 aa18.78■□□□□ 0.6
SMARCD1-211ENST00000551497 GPBP1L1Q9HC44 474 aaPredicted RBP18.78■□□□□ 0.6
SMARCD1-211ENST00000551497 SCN9AQ15858 1988 aa18.77■□□□□ 0.6
SMARCD1-211ENST00000551497 PSMD14O00487 310 aa18.77■□□□□ 0.6
SMARCD1-211ENST00000551497 BCAMP50895 628 aa18.77■□□□□ 0.6
SMARCD1-211ENST00000551497 ATP2B3Q16720 1220 aa18.77■□□□□ 0.6
SMARCD1-211ENST00000551497 FBXO33Q7Z6M2 555 aa18.77■□□□□ 0.6
SMARCD1-211ENST00000551497 HMMRO75330 724 aa18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 IFIT1P09914 478 aaKnown RBP18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 SLC5A1P13866 664 aa18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 ADORA1P30542 326 aa18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 HIBADHP31937 336 aaKnown RBP18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 TNIP1Q15025 636 aa18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 LPIN2Q92539 896 aa18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 ZBTB12Q9Y330 459 aaPredicted RBP18.76■□□□□ 0.59
SMARCD1-211ENST00000551497 ZNF804AQ7Z570 1209 aa18.75■□□□□ 0.59
SMARCD1-211ENST00000551497 MXD3Q9BW11 206 aa18.75■□□□□ 0.59
SMARCD1-211ENST00000551497 IQSEC3Q9UPP2 1182 aaPredicted RBP18.75■□□□□ 0.59
SMARCD1-211ENST00000551497 A0A1B0GUL7 405 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 USP17L3A6NCW0 530 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 USP17L4A6NCW7 530 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 APBB1O00213 710 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 VIL1P09327 827 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 IL1R1P14778 569 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 GMPSP49915 693 aaPredicted RBP18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 GTF2IP78347 998 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 USP17L1Q7RTZ2 530 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 TDRD7Q8NHU6 1098 aaKnown RBP18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 FBXW7Q969H0 707 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 NEUROD6Q96NK8 337 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 JAG2Q9Y219 1238 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 AKAP2Q9Y2D5 859 aa18.74■□□□□ 0.59
SMARCD1-211ENST00000551497 VEGFAP15692 232 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-211ENST00000551497 SCNN1DP51172 638 aa18.73■□□□□ 0.59
SMARCD1-211ENST00000551497 CAVIN4Q5BKX8 364 aa18.73■□□□□ 0.59
SMARCD1-211ENST00000551497 TTLL5Q6EMB2 1281 aa18.73■□□□□ 0.59
SMARCD1-211ENST00000551497 L3MBTL3Q96JM7 780 aaPredicted RBP18.73■□□□□ 0.59
SMARCD1-211ENST00000551497 SHTN1A0MZ66 631 aa18.72■□□□□ 0.59
SMARCD1-211ENST00000551497 KIF3CO14782 793 aa18.72■□□□□ 0.59
SMARCD1-211ENST00000551497 EPS15P42566 896 aa18.72■□□□□ 0.59
SMARCD1-211ENST00000551497 DACT2Q5SW24 774 aa18.72■□□□□ 0.59
SMARCD1-211ENST00000551497 VPS37DQ86XT2 251 aa18.72■□□□□ 0.59
SMARCD1-211ENST00000551497 XAGE2Q96GT9 111 aa18.72■□□□□ 0.59
SMARCD1-211ENST00000551497 HSP90AB4PQ58FF6 505 aa18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 TNNI3KQ59H18 835 aa18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 STRIP1Q5VSL9 837 aa18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 RSBN1LQ6PCB5 846 aaPredicted RBP18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 RHPN1Q8TCX5 695 aa18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 BCL11AQ9H165 835 aa18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 FPGT-TNNI3KV9GXZ4 949 aa18.71■□□□□ 0.59
SMARCD1-211ENST00000551497 PHKA1P46020 1223 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 EAF2Q96CJ1 260 aaPredicted RBP18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 WDR90Q96KV7 1748 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 GMLQ99445 158 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 DCTPP1Q9H773 170 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 IL1RAPL2Q9NP60 686 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 GPR108Q9NPR9 543 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 GPRC5DQ9NZD1 345 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 CNOT7Q9UIV1 285 aaKnown RBP18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 HACL1Q9UJ83 578 aa18.7■□□□□ 0.58
SMARCD1-211ENST00000551497 CCDC102BQ68D86 513 aa18.69■□□□□ 0.58
SMARCD1-211ENST00000551497 ERC1Q8IUD2 1116 aa18.69■□□□□ 0.58
SMARCD1-211ENST00000551497 CERS5Q8N5B7 392 aa18.69■□□□□ 0.58
SMARCD1-211ENST00000551497 CCDC8Q9H0W5 538 aaPredicted RBP18.69■□□□□ 0.58
SMARCD1-211ENST00000551497 TAF1DQ9H5J8 278 aaPredicted RBP18.69■□□□□ 0.58
SMARCD1-211ENST00000551497 RAB11FIP3O75154 756 aa18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 FRAT2O75474 233 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 EPHX2P34913 555 aa18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 CHAF1AQ13111 956 aaPredicted RBP18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 DPF2Q92785 391 aa18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 DBNDD2Q9BQY9 259 aa18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 FAM205AQ6ZU69 1335 aa18.68■□□□□ 0.58
SMARCD1-211ENST00000551497 IQCA1LA6NCM1 817 aa18.67■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms