RNA–Protein interactions for RNA: ENST00000551457.1

TMCC3-203, Transcript of transmembrane and coiled-coil domain family 3, humanhuman

TSL 1 (best) BASIC

Gene TMCC3, Length 4,361 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMCC3-203ENST00000551457 FAM227BQ96M60 508 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 CDC5LQ99459 802 aaKnown RBP9.47□□□□□ -0.89
TMCC3-203ENST00000551457 N4BP3O15049 544 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 PPFIA3O75145 1194 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 GPTP24298 496 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 IKQ13123 557 aaPredicted RBP9.47□□□□□ -0.89
TMCC3-203ENST00000551457 SLC9C2Q5TAH2 1124 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 ZNF790Q6PG37 636 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
TMCC3-203ENST00000551457 POLR3GO15318 223 aaPredicted RBP9.47□□□□□ -0.89
TMCC3-203ENST00000551457 TUBBP07437 444 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 KCNA6P17658 529 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 RDXP35241 583 aaKnown RBP9.47□□□□□ -0.89
TMCC3-203ENST00000551457 PAFAH1B1P43034 410 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 FAM114A1Q8IWE2 563 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 ESR2Q92731 530 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 MKNK2Q9HBH9 465 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 IFNKQ9P0W0 207 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 IMPACTQ9P2X3 320 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 MTMR6Q9Y217 621 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 TMEM2Q9UHN6 1383 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 EFCAB6Q5THR3 1501 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 ATP5JP18859 108 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 MARCKSP29966 332 aaPredicted RBP9.47□□□□□ -0.89
TMCC3-203ENST00000551457 AMPD3Q01432 767 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 MYL5Q02045 173 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 RAB11FIP4Q86YS3 637 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 CCDC144CPQ8IYA2 1237 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 FAM107BQ9H098 131 aa9.47□□□□□ -0.89
TMCC3-203ENST00000551457 POLR1AO95602 1720 aaPredicted RBP9.46□□□□□ -0.89
TMCC3-203ENST00000551457 ELP1O95163 1332 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 EYA2O00167 538 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 KIF20AO95235 890 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 GNAT2P19087 354 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 UBA7P41226 1012 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 IL17REQ8NFR9 667 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 PLBD2Q8NHP8 589 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 TSG101Q99816 390 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 TCP11L1Q9NUJ3 509 aa9.46□□□□□ -0.89
TMCC3-203ENST00000551457 SEC63Q9UGP8 760 aaKnown RBP9.46□□□□□ -0.89
TMCC3-203ENST00000551457 CCDC175P0C221 793 aa9.46□□□□□ -0.9
TMCC3-203ENST00000551457 ZHX1Q9UKY1 873 aaPredicted RBP9.46□□□□□ -0.9
TMCC3-203ENST00000551457 TRIM75PA6NK02 468 aa9.46□□□□□ -0.9
TMCC3-203ENST00000551457 RIOK3O14730 519 aaKnown RBP9.46□□□□□ -0.9
TMCC3-203ENST00000551457 SYCP1Q15431 976 aa9.46□□□□□ -0.9
TMCC3-203ENST00000551457 CLEC17AQ6ZS10 378 aa9.46□□□□□ -0.9
TMCC3-203ENST00000551457 SUCLG2Q96I99 432 aa9.46□□□□□ -0.9
TMCC3-203ENST00000551457 LGR6Q9HBX8 967 aa9.46□□□□□ -0.9
TMCC3-203ENST00000551457 SSBP05455 408 aaKnown RBP eCLIP9.45□□□□□ -0.9
TMCC3-203ENST00000551457 USP5P45974 858 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 GCKRQ14397 625 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 ME3Q16798 604 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 FAM173BQ6P4H8 233 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 DBNDD2Q9BQY9 259 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 MADDQ8WXG6 1647 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 PDE4BQ07343 736 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 BEND3Q5T5X7 828 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 CDC37L1Q7L3B6 337 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 ZNF444Q8N0Y2 327 aaPredicted RBP9.45□□□□□ -0.9
TMCC3-203ENST00000551457 CEP112Q8N8E3 955 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 ZHX3Q9H4I2 956 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 CLTCL1P53675 1640 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 TMEM266Q2M3C6 531 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 CACNA2D4Q7Z3S7 1137 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 TIGD1Q96MW7 591 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 FAM193AP78312 1265 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 DZIP1Q86YF9 867 aaKnown RBP9.45□□□□□ -0.9
TMCC3-203ENST00000551457 GTF3C6Q969F1 213 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 TMEM87BQ96K49 555 aa9.45□□□□□ -0.9
TMCC3-203ENST00000551457 LSG1Q9H089 658 aaKnown RBP9.45□□□□□ -0.9
TMCC3-203ENST00000551457 A0A1B0GVL5 298 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 SHTN1A0MZ66 631 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 GTF2F1P35269 517 aaKnown RBP eCLIP9.44□□□□□ -0.9
TMCC3-203ENST00000551457 MTIF2P46199 727 aaKnown RBP9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CKAP4Q07065 602 aaKnown RBP9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CHRNA2Q15822 529 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 ODF2Q5BJF6 829 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 ANO1Q5XXA6 986 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 NUTM2AQ8IVF1 878 aaPredicted RBP9.44□□□□□ -0.9
TMCC3-203ENST00000551457 KRI1Q8N9T8 703 aaKnown RBP9.44□□□□□ -0.9
TMCC3-203ENST00000551457 DSCC1Q9BVC3 393 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 IGSF1Q8N6C5 1336 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CTAGE15A4D2H0 777 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 MYO1BO43795 1136 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CTAGE8P0CG41 777 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CALM1P0DP23 149 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CALM2P0DP24 149 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CALM3P0DP25 149 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CCDC178Q5BJE1 867 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CTAGE6Q86UF2 777 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CTAGE4Q8IX94 777 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CCDC191Q8NCU4 936 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 APPBP2Q92624 585 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 ARHGAP31Q2M1Z3 1444 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 KDRP35968 1356 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 EXOC5O00471 708 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 LDHCP07864 332 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 GNAQP50148 359 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 CCDC152Q4G0S7 254 aa9.44□□□□□ -0.9
TMCC3-203ENST00000551457 GOLGA1Q92805 767 aa9.44□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms