RNA–Protein interactions for RNA: ENST00000551355.5

NEK3-203, Transcript of NIMA related kinase 3, humanhuman

TSL 5

Gene NEK3, Length 727 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-203ENST00000551355 CCDC102BQ68D86 513 aa12.66□□□□□ -0.38
NEK3-203ENST00000551355 VPS37DQ86XT2 251 aa12.66□□□□□ -0.38
NEK3-203ENST00000551355 HAUS7Q99871 368 aa12.66□□□□□ -0.38
NEK3-203ENST00000551355 PIM2Q9P1W9 311 aa12.66□□□□□ -0.38
NEK3-203ENST00000551355 TRIM6-TRIM34B2RNG4 842 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 HIP1O00291 1037 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 DPEP1P16444 411 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 SDSP20132 328 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 ARID4AP29374 1257 aaPredicted RBP12.65□□□□□ -0.38
NEK3-203ENST00000551355 ADORA1P30542 326 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 GPSM2P81274 684 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 DPP8Q6V1X1 898 aaPredicted RBP12.65□□□□□ -0.38
NEK3-203ENST00000551355 RTKN2Q8IZC4 609 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 MPNDQ8N594 471 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 SUPT20HQ8NEM7 779 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 EYA3Q99504 573 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 ANKRD31Q8N7Z5 1873 aa12.65□□□□□ -0.38
NEK3-203ENST00000551355 A0A0G2JLW4 131 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 IGSF3O75054 1194 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 CDC45O75419 566 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 UFL1O94874 794 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 KCNA3P22001 575 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 HIBADHP31937 336 aaKnown RBP12.64□□□□□ -0.39
NEK3-203ENST00000551355 TTF1Q15361 905 aaPredicted RBP12.64□□□□□ -0.39
NEK3-203ENST00000551355 TSHZ3Q63HK5 1081 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 ZNF804AQ7Z570 1209 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 FBXO33Q7Z6M2 555 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 C7orf43Q8WVR3 580 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 BOLA2Q9H3K6 86 aa12.64□□□□□ -0.39
NEK3-203ENST00000551355 PDS5AQ29RF7 1337 aaKnown RBP12.63□□□□□ -0.39
NEK3-203ENST00000551355 SOCS7O14512 581 aa12.63□□□□□ -0.39
NEK3-203ENST00000551355 DALRD3Q5D0E6 543 aaKnown RBP12.63□□□□□ -0.39
NEK3-203ENST00000551355 TBC1D16Q8TBP0 767 aa12.63□□□□□ -0.39
NEK3-203ENST00000551355 RILPL2Q969X0 211 aa12.63□□□□□ -0.39
NEK3-203ENST00000551355 FAM84BQ96KN1 310 aaPredicted RBP12.63□□□□□ -0.39
NEK3-203ENST00000551355 RTFDC1Q9BY42 306 aaPredicted RBP12.63□□□□□ -0.39
NEK3-203ENST00000551355 VPS33BQ9H267 617 aa12.63□□□□□ -0.39
NEK3-203ENST00000551355 PPP1R1BQ9UD71 204 aaPredicted RBP12.63□□□□□ -0.39
NEK3-203ENST00000551355 DENND2AQ9ULE3 1009 aa12.63□□□□□ -0.39
NEK3-203ENST00000551355 MED23Q9ULK4 1368 aa12.63□□□□□ -0.39
NEK3-203ENST00000551355 RFX7Q2KHR2 1363 aa12.62□□□□□ -0.39
NEK3-203ENST00000551355 C6orf229H3BNL8 230 aa12.62□□□□□ -0.39
NEK3-203ENST00000551355 PHKA1P46020 1223 aa12.62□□□□□ -0.39
NEK3-203ENST00000551355 BCAMP50895 628 aa12.62□□□□□ -0.39
NEK3-203ENST00000551355 CCDC93Q567U6 631 aa12.62□□□□□ -0.39
NEK3-203ENST00000551355 TMED8Q6PL24 325 aaPredicted RBP12.62□□□□□ -0.39
NEK3-203ENST00000551355 ZC3H12CQ9C0D7 883 aaKnown RBP12.62□□□□□ -0.39
NEK3-203ENST00000551355 PAG1Q9NWQ8 432 aa12.62□□□□□ -0.39
NEK3-203ENST00000551355 COL4A1P02462 1669 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 KIF13BQ9NQT8 1826 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 SNAP23O00161 211 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 FKBP4Q02790 459 aaKnown RBP eCLIP12.61□□□□□ -0.39
NEK3-203ENST00000551355 C8orf34Q49A92 452 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 ZSCAN25Q6NSZ9 544 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 KBTBD3Q8NAB2 608 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 SPATA5Q8NB90 893 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 RUFY2Q8WXA3 655 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 DNAJC2Q99543 621 aaKnown RBP12.61□□□□□ -0.39
NEK3-203ENST00000551355 BACH2Q9BYV9 841 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 POLLQ9UGP5 575 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 IRS2Q9Y4H2 1338 aa12.61□□□□□ -0.39
NEK3-203ENST00000551355 FRAT2O75474 233 aaPredicted RBP12.6□□□□□ -0.39
NEK3-203ENST00000551355 ZFYP08048 801 aaPredicted RBP12.6□□□□□ -0.39
NEK3-203ENST00000551355 MCAMP43121 646 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 GYG1P46976 350 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 WASHC4Q2M389 1173 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 KLHL34Q8N239 644 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 ZGPATQ8N5A5 531 aaKnown RBP12.6□□□□□ -0.39
NEK3-203ENST00000551355 PSMD1Q99460 953 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 FSD1Q9BTV5 496 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.6□□□□□ -0.39
NEK3-203ENST00000551355 COA1Q9GZY4 146 aa12.6□□□□□ -0.39
NEK3-203ENST00000551355 LRRC37AA6NMS7 1700 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 COL11A2P13942 1736 aaPredicted RBP12.59□□□□□ -0.39
NEK3-203ENST00000551355 GOLIM4O00461 696 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 C21orf2O43822 256 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 IL1R1P14778 569 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 RASGRF1Q13972 1273 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 TBC1D9Q6ZT07 1266 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 TDRD7Q8NHU6 1098 aaKnown RBP12.59□□□□□ -0.39
NEK3-203ENST00000551355 UPF2Q9HAU5 1272 aaKnown RBP12.59□□□□□ -0.39
NEK3-203ENST00000551355 DIAPH3Q9NSV4 1193 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 HMG20BQ9P0W2 317 aa12.59□□□□□ -0.39
NEK3-203ENST00000551355 G3V3G9 751 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 MAP4K4O95819 1239 aaPredicted RBP12.58□□□□□ -0.4
NEK3-203ENST00000551355 CHMLP26374 656 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 ZAP70P43403 619 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 MAP3K12Q12852 859 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 DCAF8Q5TAQ9 597 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 SPTY2D1Q68D10 685 aaPredicted RBP12.58□□□□□ -0.4
NEK3-203ENST00000551355 PODNQ7Z5L7 613 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 WDR66Q8TBY9 1149 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 CNKSR2Q8WXI2 1034 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 ARAP2Q8WZ64 1704 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 CD209Q9NNX6 404 aa12.58□□□□□ -0.4
NEK3-203ENST00000551355 DLEC1Q9Y238 1755 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 WTIPA6NIX2 430 aaPredicted RBP12.57□□□□□ -0.4
NEK3-203ENST00000551355 EPB41L2O43491 1005 aaKnown RBP12.57□□□□□ -0.4
NEK3-203ENST00000551355 REC8O95072 547 aa12.57□□□□□ -0.4
NEK3-203ENST00000551355 CYP2E1P05181 493 aaPredicted RBP12.57□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 112.3 ms