RNA–Protein interactions for RNA: ENST00000551269.1

PRPF40B-213, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 923 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-213ENST00000551269 CENPQQ7L2Z9 268 aaPredicted RBP14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 TBC1D16Q8TBP0 767 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 LPIN2Q92539 896 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 IL1RAPL2Q9NP60 686 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 FPGT-TNNI3KV9GXZ4 949 aa14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 MYO5AQ9Y4I1 1855 aaKnown RBP14.42□□□□□ -0.1
PRPF40B-213ENST00000551269 DOCK2Q92608 1830 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 A0A1B0GUL7 405 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 G3V3G9 751 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 PPIP5K2O43314 1243 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 DCAF8Q5TAQ9 597 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 ANKRD45Q5TZF3 282 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 B4GALNT3Q6L9W6 998 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 AACSQ86V21 672 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 SMC5Q8IY18 1101 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 GPR108Q9NPR9 543 aa14.41□□□□□ -0.1
PRPF40B-213ENST00000551269 NFKBIEO00221 500 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 IFIT2P09913 472 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 WASHC4Q2M389 1173 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 CAVIN4Q5BKX8 364 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 GORABQ5T7V8 394 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 ZNF804AQ7Z570 1209 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 VPS37DQ86XT2 251 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 NEUROD6Q96NK8 337 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 GPR101Q96P66 508 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 RTFDC1Q9BY42 306 aaPredicted RBP14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 ZC3H12CQ9C0D7 883 aaKnown RBP14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 POLLQ9UGP5 575 aa14.4□□□□□ -0.1
PRPF40B-213ENST00000551269 RIMBP2O15034 1052 aa14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 SMARCA5O60264 1052 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 IARSP41252 1262 aaKnown RBP14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 AOC3Q16853 763 aa14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 LARGE2Q8N3Y3 721 aa14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 GPATCH3Q96I76 525 aa14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 ZNF277Q9NRM2 450 aaPredicted RBP14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 KDM2BQ8NHM5 1336 aa14.39□□□□□ -0.11
PRPF40B-213ENST00000551269 SNAP23O00161 211 aa14.38□□□□□ -0.11
PRPF40B-213ENST00000551269 FGFR2P21802 821 aa14.38□□□□□ -0.11
PRPF40B-213ENST00000551269 NIM1KQ8IY84 436 aa14.38□□□□□ -0.11
PRPF40B-213ENST00000551269 VPS33BQ9H267 617 aa14.38□□□□□ -0.11
PRPF40B-213ENST00000551269 GTF3C3Q9Y5Q9 886 aa14.38□□□□□ -0.11
PRPF40B-213ENST00000551269 COL4A5P29400 1685 aa14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 LMNB1P20700 586 aa14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 KLRK1P26718 216 aa14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 KIAA2012Q0VF49 1180 aa14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 XAGE2Q96GT9 111 aa14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 LNPKQ9C0E8 428 aa14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 CCDC8Q9H0W5 538 aaPredicted RBP14.37□□□□□ -0.11
PRPF40B-213ENST00000551269 ECM29Q5VYK3 1845 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 FRAT2O75474 233 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 ADORA1P30542 326 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 GYG1P46976 350 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 TIMM10P62072 90 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 NUCB1Q02818 461 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 CCDC158Q5M9N0 1113 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 TTC39AQ5SRH9 613 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 C15orf52Q6ZUT6 534 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 CHD1LQ86WJ1 897 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 JDP2Q8WYK2 163 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 EAF2Q96CJ1 260 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 DBNDD2Q9BQY9 259 aa14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 GNL3LQ9NVN8 582 aaKnown RBP14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP14.36□□□□□ -0.11
PRPF40B-213ENST00000551269 MYH2Q9UKX2 1941 aa14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 ECE2O60344 883 aa14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 HIBADHP31937 336 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 COA1Q9GZY4 146 aa14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 DBNDD1Q9H9R9 158 aa14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 TLR7Q9NYK1 1049 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 RNF181Q9P0P0 153 aa14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 DBNLQ9UJU6 430 aaKnown RBP14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 IRS2Q9Y4H2 1338 aa14.35□□□□□ -0.11
PRPF40B-213ENST00000551269 FBXW7Q969H0 707 aa14.34□□□□□ -0.11
PRPF40B-213ENST00000551269 UTRNP46939 3433 aa14.34□□□□□ -0.11
PRPF40B-213ENST00000551269 WTIPA6NIX2 430 aaPredicted RBP14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 UQCRFS1P1P0C7P4 283 aa14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 MX1P20591 662 aa14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 PHKA1P46020 1223 aa14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 DOK7Q18PE1 504 aa14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 CCDC102BQ68D86 513 aa14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 TXNRD3Q86VQ6 643 aa14.33□□□□□ -0.12
PRPF40B-213ENST00000551269 COL1A1P02452 1464 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 ADAMTSL1Q8N6G6 1762 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 SCN4AP35499 1836 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 SEMA3EO15041 775 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 ERC2O15083 957 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 BCAMP50895 628 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 C9orf131Q5VYM1 1079 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 PODNQ7Z5L7 613 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 FAM84BQ96KN1 310 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 CD209Q9NNX6 404 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 IQSEC3Q9UPP2 1182 aaPredicted RBP14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 TTC41PQ6P2S7 1318 aa14.32□□□□□ -0.12
PRPF40B-213ENST00000551269 ARID4AP29374 1257 aaPredicted RBP14.31□□□□□ -0.12
PRPF40B-213ENST00000551269 EIF6P56537 245 aaKnown RBP14.31□□□□□ -0.12
PRPF40B-213ENST00000551269 FBXO33Q7Z6M2 555 aa14.31□□□□□ -0.12
PRPF40B-213ENST00000551269 ECHDC1Q9NTX5 307 aa14.31□□□□□ -0.12
PRPF40B-213ENST00000551269 DENND2AQ9ULE3 1009 aa14.31□□□□□ -0.12
PRPF40B-213ENST00000551269 ZNRF3Q9ULT6 936 aa14.31□□□□□ -0.12
PRPF40B-213ENST00000551269 ZC3H4Q9UPT8 1303 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms