RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 MCAMP43121 646 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 ERFEQ4G0M1 354 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 PI16Q6UXB8 463 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 NBPF5PQ86XG9 351 aaPredicted RBP18.48■□□□□ 0.55
SCN8A-206ENST00000550891 ANKRD18AQ8IVF6 992 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 APPBP2Q92624 585 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 CTNNA3Q9UI47 895 aa18.48■□□□□ 0.55
SCN8A-206ENST00000550891 RGL2O15211 777 aa18.47■□□□□ 0.55
SCN8A-206ENST00000550891 ZNF512BQ96KM6 892 aaPredicted RBP18.47■□□□□ 0.55
SCN8A-206ENST00000550891 TCEANC2Q96MN5 208 aa18.47■□□□□ 0.55
SCN8A-206ENST00000550891 CICQ96RK0 1608 aaPredicted RBP18.47■□□□□ 0.55
SCN8A-206ENST00000550891 HMGB1P09429 215 aaKnown RBP18.47■□□□□ 0.55
SCN8A-206ENST00000550891 PHKA1P46020 1223 aa18.47■□□□□ 0.55
SCN8A-206ENST00000550891 DDX49Q9Y6V7 483 aaKnown RBP18.47■□□□□ 0.55
SCN8A-206ENST00000550891 CYP21A2P08686 494 aa18.47■□□□□ 0.55
SCN8A-206ENST00000550891 HSPD1P10809 573 aaKnown RBP18.47■□□□□ 0.55
SCN8A-206ENST00000550891 QTRT2Q9H974 415 aaKnown RBP18.47■□□□□ 0.55
SCN8A-206ENST00000550891 SPEF2Q9C093 1822 aa18.46■□□□□ 0.55
SCN8A-206ENST00000550891 RREB1Q92766 1687 aa18.46■□□□□ 0.55
SCN8A-206ENST00000550891 RFC4P35249 363 aa18.46■□□□□ 0.55
SCN8A-206ENST00000550891 RTL9Q8NET4 1388 aa18.46■□□□□ 0.55
SCN8A-206ENST00000550891 SLC9C2Q5TAH2 1124 aa18.46■□□□□ 0.55
SCN8A-206ENST00000550891 TBC1D9BQ66K14 1250 aa18.46■□□□□ 0.55
SCN8A-206ENST00000550891 SMIM5Q71RC9 77 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 OSBP2Q969R2 916 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 SRP68Q9UHB9 627 aaKnown RBP18.45■□□□□ 0.54
SCN8A-206ENST00000550891 PHF14O94880 888 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 BRD1O95696 1058 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 NCLP19338 710 aaKnown RBP18.45■□□□□ 0.54
SCN8A-206ENST00000550891 TPTE2Q6XPS3 522 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 NLRP3Q96P20 1036 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 M0R2C6 588 aa18.45■□□□□ 0.54
SCN8A-206ENST00000550891 TAF6LQ9Y6J9 622 aa18.44■□□□□ 0.54
SCN8A-206ENST00000550891 IMMTQ16891 758 aaKnown RBP18.44■□□□□ 0.54
SCN8A-206ENST00000550891 TRAPPC3LQ5T215 181 aa18.44■□□□□ 0.54
SCN8A-206ENST00000550891 ZDHHC9Q9Y397 364 aa18.44■□□□□ 0.54
SCN8A-206ENST00000550891 FGFR2P21802 821 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 ARID4AP29374 1257 aaPredicted RBP18.43■□□□□ 0.54
SCN8A-206ENST00000550891 CHRNDQ07001 517 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 ME3Q16798 604 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 COL5A3P25940 1745 aaPredicted RBP18.43■□□□□ 0.54
SCN8A-206ENST00000550891 THSD7AQ9UPZ6 1657 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 LARGE1O95461 756 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 NECAB1Q8N987 351 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 TPCN1Q9ULQ1 816 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 ZNF831Q5JPB2 1677 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 MAP3K12Q12852 859 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 SF3B3Q15393 1217 aaKnown RBP18.43■□□□□ 0.54
SCN8A-206ENST00000550891 SPATA5Q8NB90 893 aa18.43■□□□□ 0.54
SCN8A-206ENST00000550891 VPS37DQ86XT2 251 aa18.42■□□□□ 0.54
SCN8A-206ENST00000550891 ARHGEF1Q92888 912 aaKnown RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 ATP6V1DQ9Y5K8 247 aa18.42■□□□□ 0.54
SCN8A-206ENST00000550891 BTAF1O14981 1849 aa18.42■□□□□ 0.54
SCN8A-206ENST00000550891 GPAA1O43292 621 aa18.42■□□□□ 0.54
SCN8A-206ENST00000550891 ONECUT3O60422 494 aaPredicted RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 PRPF40AO75400 957 aaKnown RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 APPP05067 770 aa18.42■□□□□ 0.54
SCN8A-206ENST00000550891 GJB2P29033 226 aa18.42■□□□□ 0.54
SCN8A-206ENST00000550891 L1TD1Q5T7N2 865 aaKnown RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 BCL11BQ9C0K0 894 aaPredicted RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 ALDH8A1Q9H2A2 487 aaPredicted RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 GNL3LQ9NVN8 582 aaKnown RBP18.42■□□□□ 0.54
SCN8A-206ENST00000550891 SNAP23O00161 211 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 STX6O43752 255 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 STK3Q13188 491 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 FOXD4L6Q3SYB3 417 aaPredicted RBP18.41■□□□□ 0.54
SCN8A-206ENST00000550891 FOXD4L3Q6VB84 417 aaPredicted RBP18.41■□□□□ 0.54
SCN8A-206ENST00000550891 Q6ZUG5 572 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 DHX32Q7L7V1 743 aaKnown RBP18.41■□□□□ 0.54
SCN8A-206ENST00000550891 ATRNO75882 1429 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 GOLGA6L3A6NEY3 463 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 ADD2P35612 726 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 FAM196AQ6ZSG2 479 aa18.41■□□□□ 0.54
SCN8A-206ENST00000550891 PUS7LQ9H0K6 701 aaKnown RBP18.41■□□□□ 0.54
SCN8A-206ENST00000550891 NAP1L2Q9ULW6 460 aaPredicted RBP18.41■□□□□ 0.54
SCN8A-206ENST00000550891 NHSQ6T4R5 1651 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 BCL2L12Q9HB09 334 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 PIH1D3Q9NQM4 214 aaKnown RBP18.4■□□□□ 0.54
SCN8A-206ENST00000550891 PDCP20941 246 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 UBE3CQ15386 1083 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 AIDAQ96BJ3 306 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 SYT1P21579 422 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 KLHL40Q2TBA0 621 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 CAVIN4Q5BKX8 364 aa18.4■□□□□ 0.54
SCN8A-206ENST00000550891 BSDC1Q9NW68 430 aaPredicted RBP18.4■□□□□ 0.54
SCN8A-206ENST00000550891 PDIA4P13667 645 aaKnown RBP18.39■□□□□ 0.53
SCN8A-206ENST00000550891 RASGRF1Q13972 1273 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 TOB2Q14106 344 aaPredicted RBP18.39■□□□□ 0.53
SCN8A-206ENST00000550891 SLC10A5Q5PT55 438 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 ZNF532Q9HCE3 1301 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 VPS37CA5D8V6 355 aaPredicted RBP18.39■□□□□ 0.53
SCN8A-206ENST00000550891 E7EWF7 191 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 ZNF213O14771 459 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 PDE6AP16499 860 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 BCAMP50895 628 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 RALYLQ86SE5 291 aaKnown RBP18.39■□□□□ 0.53
SCN8A-206ENST00000550891 BRF1Q92994 677 aa18.39■□□□□ 0.53
SCN8A-206ENST00000550891 ZSCAN22P10073 491 aaPredicted RBP18.38■□□□□ 0.53
SCN8A-206ENST00000550891 HAND2P61296 217 aa18.38■□□□□ 0.53
SCN8A-206ENST00000550891 LRP2BPQ9P2M1 347 aa18.38■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms