RNA–Protein interactions for RNA: ENST00000550828.1

ERBB3-215, Transcript of erb-b2 receptor tyrosine kinase 3, humanhuman

TSL 1 (best)

Gene ERBB3, Length 266 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB3-215ENST00000550828 TLR7Q9NYK1 1049 aaKnown RBP16.68■□□□□ 0.26
ERBB3-215ENST00000550828 ANKIB1Q9P2G1 1089 aa16.68■□□□□ 0.26
ERBB3-215ENST00000550828 GTF3C3Q9Y5Q9 886 aa16.68■□□□□ 0.26
ERBB3-215ENST00000550828 ZNF804BA4D1E1 1349 aa16.68■□□□□ 0.26
ERBB3-215ENST00000550828 ATP2B4P23634 1241 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 TIMM10P62072 90 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 PUM3Q15397 648 aaKnown RBP16.67■□□□□ 0.26
ERBB3-215ENST00000550828 ATP2B3Q16720 1220 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 TNNI3KQ59H18 835 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 LRRCC1Q9C099 1032 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 GGA1Q9UJY5 639 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 LEMD3Q9Y2U8 911 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 FPGT-TNNI3KV9GXZ4 949 aa16.67■□□□□ 0.26
ERBB3-215ENST00000550828 A0A1B0GUL7 405 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 FKBP4Q02790 459 aaKnown RBP eCLIP16.66■□□□□ 0.26
ERBB3-215ENST00000550828 NUCB1Q02818 461 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 UBE4AQ14139 1066 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 SKAP1Q86WV1 359 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 RTKN2Q8IZC4 609 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 OTUD7AQ8TE49 926 aaPredicted RBP16.66■□□□□ 0.26
ERBB3-215ENST00000550828 PSMD1Q99460 953 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 GPR108Q9NPR9 543 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 ZNF277Q9NRM2 450 aaPredicted RBP16.66■□□□□ 0.26
ERBB3-215ENST00000550828 LTBP3Q9NS15 1303 aa16.66■□□□□ 0.26
ERBB3-215ENST00000550828 MED23Q9ULK4 1368 aa16.65■□□□□ 0.26
ERBB3-215ENST00000550828 WDR90Q96KV7 1748 aa16.65■□□□□ 0.26
ERBB3-215ENST00000550828 C6orf229H3BNL8 230 aa16.65■□□□□ 0.26
ERBB3-215ENST00000550828 ANKRD45Q5TZF3 282 aa16.65■□□□□ 0.26
ERBB3-215ENST00000550828 C15orf52Q6ZUT6 534 aaKnown RBP16.65■□□□□ 0.26
ERBB3-215ENST00000550828 CENPQQ7L2Z9 268 aaPredicted RBP16.65■□□□□ 0.26
ERBB3-215ENST00000550828 C16orf71Q8IYS4 520 aaPredicted RBP16.65■□□□□ 0.26
ERBB3-215ENST00000550828 DBNLQ9UJU6 430 aaKnown RBP16.65■□□□□ 0.26
ERBB3-215ENST00000550828 TOMM70O94826 608 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 PDE4AP27815 886 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 LPIN2Q92539 896 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 DBNDD2Q9BQY9 259 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 LNPKQ9C0E8 428 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 CCDC8Q9H0W5 538 aaPredicted RBP16.64■□□□□ 0.25
ERBB3-215ENST00000550828 TAOK3Q9H2K8 898 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 COL1A1P02452 1464 aaPredicted RBP16.64■□□□□ 0.25
ERBB3-215ENST00000550828 SALL3Q9BXA9 1300 aa16.64■□□□□ 0.25
ERBB3-215ENST00000550828 RIMBP2O15034 1052 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 GYG1P46976 350 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 KCNJ4P48050 445 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 AOC3Q16853 763 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 GRIPAP1Q4V328 841 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 ARHGAP27Q6ZUM4 889 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 AACSQ86V21 672 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 XAGE2Q96GT9 111 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 BCL11AQ9H165 835 aa16.63■□□□□ 0.25
ERBB3-215ENST00000550828 SLC5A1P13866 664 aa16.62■□□□□ 0.25
ERBB3-215ENST00000550828 PHKA1P46020 1223 aa16.62■□□□□ 0.25
ERBB3-215ENST00000550828 KIAA2012Q0VF49 1180 aa16.62■□□□□ 0.25
ERBB3-215ENST00000550828 FBXO33Q7Z6M2 555 aa16.62■□□□□ 0.25
ERBB3-215ENST00000550828 CHD1LQ86WJ1 897 aa16.62■□□□□ 0.25
ERBB3-215ENST00000550828 FAM84BQ96KN1 310 aaPredicted RBP16.62■□□□□ 0.25
ERBB3-215ENST00000550828 TMX4Q9H1E5 349 aaPredicted RBP16.62■□□□□ 0.25
ERBB3-215ENST00000550828 AKAP2Q9Y2D5 859 aa16.62■□□□□ 0.25
ERBB3-215ENST00000550828 DOCK2Q92608 1830 aa16.61■□□□□ 0.25
ERBB3-215ENST00000550828 AK9Q5TCS8 1911 aa16.61■□□□□ 0.25
ERBB3-215ENST00000550828 IARSP41252 1262 aaKnown RBP16.61■□□□□ 0.25
ERBB3-215ENST00000550828 BCAMP50895 628 aa16.61■□□□□ 0.25
ERBB3-215ENST00000550828 CLASRPQ8N2M8 674 aaKnown RBP16.61■□□□□ 0.25
ERBB3-215ENST00000550828 NEUROD6Q96NK8 337 aa16.61■□□□□ 0.25
ERBB3-215ENST00000550828 MYH7P12883 1935 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 PPIP5K2O43314 1243 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 IFIT1P09914 478 aaKnown RBP16.6■□□□□ 0.25
ERBB3-215ENST00000550828 DOK7Q18PE1 504 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 WASHC4Q2M389 1173 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 TSHZ3Q63HK5 1081 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 DNAJC5GQ8N7S2 189 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 SUPT20HQ8NEM7 779 aa16.6■□□□□ 0.25
ERBB3-215ENST00000550828 YDJCA8MPS7 323 aa16.59■□□□□ 0.25
ERBB3-215ENST00000550828 SCARF1Q14162 830 aa16.59■□□□□ 0.25
ERBB3-215ENST00000550828 CCDC102BQ68D86 513 aa16.59■□□□□ 0.25
ERBB3-215ENST00000550828 DBNDD1Q9H9R9 158 aa16.59■□□□□ 0.25
ERBB3-215ENST00000550828 EYA3Q99504 573 aa16.58■□□□□ 0.24
ERBB3-215ENST00000550828 ZC3H12CQ9C0D7 883 aaKnown RBP16.58■□□□□ 0.24
ERBB3-215ENST00000550828 CD209Q9NNX6 404 aa16.58■□□□□ 0.24
ERBB3-215ENST00000550828 KCNQ5Q9NR82 932 aa16.58■□□□□ 0.24
ERBB3-215ENST00000550828 IQSEC3Q9UPP2 1182 aaPredicted RBP16.58■□□□□ 0.24
ERBB3-215ENST00000550828 ADAMTSL1Q8N6G6 1762 aa16.58■□□□□ 0.24
ERBB3-215ENST00000550828 IFIT2P09913 472 aaKnown RBP16.57■□□□□ 0.24
ERBB3-215ENST00000550828 HIBADHP31937 336 aaKnown RBP16.57■□□□□ 0.24
ERBB3-215ENST00000550828 LARGE2Q8N3Y3 721 aa16.57■□□□□ 0.24
ERBB3-215ENST00000550828 TDRD7Q8NHU6 1098 aaKnown RBP16.57■□□□□ 0.24
ERBB3-215ENST00000550828 RBM46Q8TBY0 533 aaKnown RBP16.57■□□□□ 0.24
ERBB3-215ENST00000550828 ECE2O60344 883 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 IL1R1P14778 569 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 LMNB1P20700 586 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 ARID4AP29374 1257 aaPredicted RBP16.56■□□□□ 0.24
ERBB3-215ENST00000550828 PI16Q6UXB8 463 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 PLEKHM2Q8IWE5 1019 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 COA1Q9GZY4 146 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 VPS33BQ9H267 617 aa16.56■□□□□ 0.24
ERBB3-215ENST00000550828 MCAMP43121 646 aa16.55■□□□□ 0.24
ERBB3-215ENST00000550828 PDE1AP54750 535 aa16.55■□□□□ 0.24
ERBB3-215ENST00000550828 RASGRF1Q13972 1273 aa16.55■□□□□ 0.24
ERBB3-215ENST00000550828 ZNF804AQ7Z570 1209 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms