RNA–Protein interactions for RNA: ENST00000550557.1

NR4A1-215, Transcript of nuclear receptor subfamily 4 group A member 1, humanhuman

TSL 1 (best)

Gene NR4A1, Length 4,837 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NR4A1-215ENST00000550557 DHX8Q14562 1220 aaKnown RBP14.14□□□□□ -0.15
NR4A1-215ENST00000550557 CEP85Q6P2H3 762 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 SNX21Q969T3 373 aa14.14□□□□□ -0.15
NR4A1-215ENST00000550557 IFIT1BQ5T764 474 aaKnown RBP14.13□□□□□ -0.15
NR4A1-215ENST00000550557 CCDC83Q8IWF9 413 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 CEP57L1Q8IYX8 460 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 TAF5LO75529 589 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 PDIA4P13667 645 aaKnown RBP14.13□□□□□ -0.15
NR4A1-215ENST00000550557 GNAQP50148 359 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 G2E3Q7L622 706 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 SDSP20132 328 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 PDILTQ8N807 584 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 PRR36Q9H6K5 1346 aa14.13□□□□□ -0.15
NR4A1-215ENST00000550557 MCM5P33992 734 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 CCT2P78371 535 aaKnown RBP14.12□□□□□ -0.15
NR4A1-215ENST00000550557 TMTC2Q8N394 836 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 ANKARQ7Z5J8 1434 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 TBC1D22AQ8WUA7 517 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 DNAI2Q9GZS0 605 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 IVNS1ABPQ9Y6Y0 642 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 KIAA1210Q9ULL0 1709 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 SERPINB2P05120 415 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 HMGN5P82970 282 aaKnown RBP14.12□□□□□ -0.15
NR4A1-215ENST00000550557 RAB3GAP1Q15042 981 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 CKAP2LQ8IYA6 745 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 QRICH2Q9H0J4 1663 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 IQGAP1P46940 1657 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 MCMDC2Q4G0Z9 681 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 NEK1Q96PY6 1258 aa14.12□□□□□ -0.15
NR4A1-215ENST00000550557 METAP2P50579 478 aaKnown RBP eCLIP14.11□□□□□ -0.15
NR4A1-215ENST00000550557 TNFAIP1Q13829 316 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 USP6P35125 1406 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 SPATA31A6Q5VVP1 1343 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 A0A1B0GUL7 405 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 LIG1P18858 919 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 TIMM10P62072 90 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 SULF1Q8IWU6 871 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 IL17REQ8NFR9 667 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 SPATA32Q96LK8 384 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 HMG20BQ9P0W2 317 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 DACH1Q9UI36 760 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 GIGYF1O75420 1035 aaPredicted RBP14.11□□□□□ -0.15
NR4A1-215ENST00000550557 PDE1AP54750 535 aa14.11□□□□□ -0.15
NR4A1-215ENST00000550557 ZNF594Q96JF6 807 aaPredicted RBP14.11□□□□□ -0.15
NR4A1-215ENST00000550557 SH2B1Q9NRF2 756 aaPredicted RBP14.11□□□□□ -0.15
NR4A1-215ENST00000550557 PPP1R12BO60237 982 aaPredicted RBP14.1□□□□□ -0.15
NR4A1-215ENST00000550557 IL6STP40189 918 aaPredicted RBP14.1□□□□□ -0.15
NR4A1-215ENST00000550557 GTF2IP78347 998 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 GCKRQ14397 625 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 ZBTB1Q9Y2K1 713 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 FERMT3Q86UX7 667 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 PLEKHM2Q8IWE5 1019 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 DCPSQ96C86 337 aaKnown RBP14.1□□□□□ -0.15
NR4A1-215ENST00000550557 RBM10P98175 930 aaKnown RBP14.1□□□□□ -0.15
NR4A1-215ENST00000550557 SMARCC2Q8TAQ2 1214 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 UBA5Q9GZZ9 404 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 CSADQ9Y600 493 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 ERBB4Q15303 1308 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 RNF113AO15541 343 aaKnown RBP14.1□□□□□ -0.15
NR4A1-215ENST00000550557 GUCY1B3Q02153 619 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 RAB11FIP4Q86YS3 637 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 LPIN2Q92539 896 aa14.1□□□□□ -0.15
NR4A1-215ENST00000550557 KCNQ3O43525 872 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 SETQ01105 290 aaPredicted RBP14.09□□□□□ -0.15
NR4A1-215ENST00000550557 TEX35Q5T0J7 233 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 TTLL7Q6ZT98 887 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 SAP30BPQ9UHR5 308 aaKnown RBP14.09□□□□□ -0.15
NR4A1-215ENST00000550557 KIF24Q5T7B8 1368 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 ZBTB7AO95365 584 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 ATP2B4P23634 1241 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 USP48Q86UV5 1035 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 ABCC4O15439 1325 aa14.09□□□□□ -0.15
NR4A1-215ENST00000550557 CLCN1P35523 988 aa14.08□□□□□ -0.15
NR4A1-215ENST00000550557 SLC26A6Q9BXS9 759 aa14.08□□□□□ -0.15
NR4A1-215ENST00000550557 RTL1A6NKG5 1358 aa14.08□□□□□ -0.15
NR4A1-215ENST00000550557 KIDINS220Q9ULH0 1771 aa14.08□□□□□ -0.15
NR4A1-215ENST00000550557 CAMSAP1Q5T5Y3 1602 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 DALRD3Q5D0E6 543 aaKnown RBP14.08□□□□□ -0.16
NR4A1-215ENST00000550557 PANK2Q9BZ23 570 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 MROH5Q6ZUA9 1318 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 SYCE3A1L190 88 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 MMP10P09238 476 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 CERS3Q8IU89 383 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 ARHGEF10LQ9HCE6 1279 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 USP19O94966 1318 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 ZBTB43O43298 467 aa14.08□□□□□ -0.16
NR4A1-215ENST00000550557 RBM25P49756 843 aaKnown RBP14.07□□□□□ -0.16
NR4A1-215ENST00000550557 TCP11L1Q9NUJ3 509 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 ORC3Q9UBD5 711 aaPredicted RBP14.07□□□□□ -0.16
NR4A1-215ENST00000550557 TCP10Q12799 353 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 SMCR8Q8TEV9 937 aaPredicted RBP14.07□□□□□ -0.16
NR4A1-215ENST00000550557 TTF2Q9UNY4 1162 aaKnown RBP14.07□□□□□ -0.16
NR4A1-215ENST00000550557 MAP3K15Q6ZN16 1313 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 MBD4O95243 580 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 NBPF7P0C2Y1 421 aaPredicted RBP14.07□□□□□ -0.16
NR4A1-215ENST00000550557 KLHL40Q2TBA0 621 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 MFSD14BQ5SR56 506 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 KLF18A0A0U1RQI7 1052 aa14.07□□□□□ -0.16
NR4A1-215ENST00000550557 EN1Q05925 392 aaPredicted RBP14.07□□□□□ -0.16
NR4A1-215ENST00000550557 DOK7Q18PE1 504 aa14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 49.2 ms