RNA–Protein interactions for RNA: ENST00000550552.5

TMEM106C-215, Transcript of transmembrane protein 106C, humanhuman

TSL 1 (best) BASIC

Gene TMEM106C, Length 776 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM106C-215ENST00000550552 PODNQ7Z5L7 613 aa8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 VGLL2Q8N8G2 317 aa8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 DPF2Q92785 391 aa8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 MXD3Q9BW11 206 aa8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 GPRC5DQ9NZD1 345 aa8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 CNOT7Q9UIV1 285 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 PA2G4Q9UQ80 394 aaKnown RBP8.12□□□□□ -1.11
TMEM106C-215ENST00000550552 MROH5Q6ZUA9 1318 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 PNMA6EA0A0J9YXQ4 647 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 USP17L3A6NCW0 530 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 USP17L4A6NCW7 530 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 EYA2O00167 538 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 PDE8BO95263 885 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 GNAI2P04899 355 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 KCNJ4P48050 445 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 FSTL1Q12841 308 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 MTX1Q13505 466 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 UBE4AQ14139 1066 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 EAPPQ56P03 285 aaPredicted RBP8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 C20orf194Q5TEA3 1177 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 USP17L1Q7RTZ2 530 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 SMC1BQ8NDV3 1235 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 FAM84BQ96KN1 310 aaPredicted RBP8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 GMLQ99445 158 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 COA1Q9GZY4 146 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 SIL1Q9H173 461 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 CD209Q9NNX6 404 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 HDAC5Q9UQL6 1122 aa8.11□□□□□ -1.11
TMEM106C-215ENST00000550552 MYH3P11055 1940 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 SRGAP3O43295 1099 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 ITGBL1O95965 494 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 EGFRP00533 1210 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 IL1R1P14778 569 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 HSPA6P17066 643 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 FGFR2P21802 821 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 RPS12P25398 132 aaKnown RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 LMOD1P29536 600 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 GYG1P46976 350 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 METTL24Q5JXM2 366 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 DACT2Q5SW24 774 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 MAP1SQ66K74 1059 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 CHADLQ6NUI6 762 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 RSBN1LQ6PCB5 846 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 USP50Q70EL3 339 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 SAMD7Q7Z3H4 446 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 PNMA8AQ86V59 439 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 LDHDQ86WU2 507 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 ITPRIPQ8IWB1 547 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 MICALL2Q8IY33 904 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 FTSJ3Q8IY81 847 aaKnown RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 C1orf115Q9H7X2 142 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 COPRSQ9NQ92 184 aa8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP8.1□□□□□ -1.11
TMEM106C-215ENST00000550552 CIAO1O76071 339 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 BCAMP50895 628 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 GTF2IP78347 998 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 HTRA3P83110 453 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 ATP8B2P98198 1209 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 FMR1Q06787 632 aaKnown RBP eCLIP8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 STRIP1Q5VSL9 837 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 TTLL5Q6EMB2 1281 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 FBXO33Q7Z6M2 555 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 CNTROBQ8N137 903 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 CERS5Q8N5B7 392 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 AGBL3Q8NEM8 1001 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 TDRD7Q8NHU6 1098 aaKnown RBP8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 TRPM4Q8TD43 1214 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 ADARB2Q9NS39 739 aaKnown RBP8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 PGAP2Q9UHJ9 254 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 FBXO3Q9UK99 471 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 CLEC11AQ9Y240 323 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 COG6Q9Y2V7 657 aa8.09□□□□□ -1.11
TMEM106C-215ENST00000550552 H7C1D1 291 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 SASH1O94885 1247 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 HIBADHP31937 336 aaKnown RBP8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 IL15P40933 162 aaPredicted RBP8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 ZNF280AP59817 542 aaPredicted RBP8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 POLA2Q14181 598 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 TBC1D10BQ4KMP7 808 aaPredicted RBP8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 RBM26Q5T8P6 1007 aaKnown RBP8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 DLK2Q6UY11 383 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 ZNF804AQ7Z570 1209 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 SSH3Q8TE77 659 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 ZBTB40Q9NUA8 1239 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 CEP126Q9P2H0 1117 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 SPEF2Q9C093 1822 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 SCN9AQ15858 1988 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 PCNTO95613 3336 aa8.08□□□□□ -1.12
TMEM106C-215ENST00000550552 ASTN2O75129 1339 aaPredicted RBP8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 PASKQ96RG2 1323 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 USP17L8P0C7I0 530 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 MS4A1P11836 297 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 APLP1P51693 650 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 TIMM10P62072 90 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 TFCP2Q12800 502 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 PDE3AQ14432 1141 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 MVPQ14764 893 aaKnown RBP8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 PUM3Q15397 648 aaKnown RBP8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 DNAJC5GQ8N7S2 189 aa8.07□□□□□ -1.12
TMEM106C-215ENST00000550552 LPIN2Q92539 896 aa8.07□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 48.1 ms