RNA–Protein interactions for RNA: ENST00000550471.1

GCN1-207, Transcript of GCN1, eIF2 alpha kinase activator homolog, humanhuman

TSL 3

Gene GCN1, Length 918 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCN1-207ENST00000550471 CHRNDQ07001 517 aa25.19■■□□□ 1.62
GCN1-207ENST00000550471 TAF7LQ5H9L4 462 aa25.19■■□□□ 1.62
GCN1-207ENST00000550471 SAPCD2Q86UD0 394 aa25.19■■□□□ 1.62
GCN1-207ENST00000550471 SULF1Q8IWU6 871 aa25.19■■□□□ 1.62
GCN1-207ENST00000550471 GMLQ99445 158 aa25.19■■□□□ 1.62
GCN1-207ENST00000550471 WBP1LQ9NX94 342 aa25.19■■□□□ 1.62
GCN1-207ENST00000550471 CTCFP49711 727 aaPredicted RBP25.18■■□□□ 1.62
GCN1-207ENST00000550471 LMBR1LQ6UX01 489 aa25.18■■□□□ 1.62
GCN1-207ENST00000550471 PAXIP1Q6ZW49 1069 aaPredicted RBP25.18■■□□□ 1.62
GCN1-207ENST00000550471 MRPL50Q8N5N7 158 aaKnown RBP25.18■■□□□ 1.62
GCN1-207ENST00000550471 CAPNS2Q96L46 248 aa25.18■■□□□ 1.62
GCN1-207ENST00000550471 PRDM10Q9NQV6 1147 aa25.18■■□□□ 1.62
GCN1-207ENST00000550471 PSME4Q14997 1843 aa25.18■■□□□ 1.62
GCN1-207ENST00000550471 UTYO14607 1347 aa25.17■■□□□ 1.62
GCN1-207ENST00000550471 PITPNM2Q9BZ72 1349 aa25.17■■□□□ 1.62
GCN1-207ENST00000550471 SHTN1A0MZ66 631 aa25.17■■□□□ 1.62
GCN1-207ENST00000550471 RBM26Q5T8P6 1007 aaKnown RBP25.17■■□□□ 1.62
GCN1-207ENST00000550471 USP48Q86UV5 1035 aa25.17■■□□□ 1.62
GCN1-207ENST00000550471 BEGAINQ9BUH8 593 aa25.17■■□□□ 1.62
GCN1-207ENST00000550471 SCN9AQ15858 1988 aa25.16■■□□□ 1.62
GCN1-207ENST00000550471 MYOZ2Q9NPC6 264 aa25.16■■□□□ 1.62
GCN1-207ENST00000550471 DACT2Q5SW24 774 aa25.15■■□□□ 1.62
GCN1-207ENST00000550471 COL13A1Q5TAT6 717 aaPredicted RBP25.15■■□□□ 1.62
GCN1-207ENST00000550471 LDHAL6AQ6ZMR3 332 aa25.15■■□□□ 1.62
GCN1-207ENST00000550471 C2orf69Q8N8R5 385 aa25.15■■□□□ 1.62
GCN1-207ENST00000550471 HDAC9Q9UKV0 1011 aa25.15■■□□□ 1.62
GCN1-207ENST00000550471 FMR1Q06787 632 aaKnown RBP eCLIP25.14■■□□□ 1.623e-8■□□□□ 11.2
GCN1-207ENST00000550471 TTLL5Q6EMB2 1281 aa25.14■■□□□ 1.62
GCN1-207ENST00000550471 ZNF408Q9H9D4 720 aa25.14■■□□□ 1.62
GCN1-207ENST00000550471 CA12O43570 354 aa25.13■■□□□ 1.61
GCN1-207ENST00000550471 ZNF804AQ7Z570 1209 aa25.13■■□□□ 1.61
GCN1-207ENST00000550471 TNS4Q8IZW8 715 aa25.13■■□□□ 1.61
GCN1-207ENST00000550471 CNNM1Q9NRU3 951 aa25.13■■□□□ 1.61
GCN1-207ENST00000550471 GGA3Q9NZ52 723 aa25.13■■□□□ 1.61
GCN1-207ENST00000550471 SPEF2Q9C093 1822 aa25.12■■□□□ 1.61
GCN1-207ENST00000550471 EGFRP00533 1210 aa25.12■■□□□ 1.61
GCN1-207ENST00000550471 SCARF1Q14162 830 aa25.12■■□□□ 1.61
GCN1-207ENST00000550471 TRMT2AQ8IZ69 625 aaKnown RBP25.12■■□□□ 1.61
GCN1-207ENST00000550471 SSH1Q8WYL5 1049 aa25.12■■□□□ 1.61
GCN1-207ENST00000550471 HDAC5Q9UQL6 1122 aa25.12■■□□□ 1.61
GCN1-207ENST00000550471 FOXN1O15353 648 aa25.11■■□□□ 1.61
GCN1-207ENST00000550471 FKBP1BP68106 108 aa25.11■■□□□ 1.61
GCN1-207ENST00000550471 CYP4F22Q6NT55 531 aa25.11■■□□□ 1.61
GCN1-207ENST00000550471 GBA2Q9HCG7 927 aaPredicted RBP25.11■■□□□ 1.61
GCN1-207ENST00000550471 CD209Q9NNX6 404 aa25.11■■□□□ 1.61
GCN1-207ENST00000550471 FKBP1AP62942 108 aaKnown RBP25.1■■□□□ 1.61
GCN1-207ENST00000550471 NOGQ13253 232 aa25.1■■□□□ 1.61
GCN1-207ENST00000550471 FBXW7Q969H0 707 aa25.1■■□□□ 1.61
GCN1-207ENST00000550471 THSD7BQ9C0I4 1608 aa25.1■■□□□ 1.61
GCN1-207ENST00000550471 BRPF1P55201 1214 aaPredicted RBP25.09■■□□□ 1.61
GCN1-207ENST00000550471 HUNKP57058 714 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 UBE4AQ14139 1066 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 RABL6Q3YEC7 729 aaPredicted RBP25.09■■□□□ 1.61
GCN1-207ENST00000550471 EPHA10Q5JZY3 1008 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 TXNRD3Q86VQ6 643 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 CCDC102AQ96A19 550 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 SMC4Q9NTJ3 1288 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 MROH5Q6ZUA9 1318 aa25.09■■□□□ 1.61
GCN1-207ENST00000550471 NBPF7P0C2Y1 421 aaPredicted RBP25.08■■□□□ 1.61
GCN1-207ENST00000550471 IL1R1P14778 569 aa25.08■■□□□ 1.61
GCN1-207ENST00000550471 ANGEL2Q5VTE6 544 aaKnown RBP25.08■■□□□ 1.61
GCN1-207ENST00000550471 SUCLG2Q96I99 432 aa25.08■■□□□ 1.61
GCN1-207ENST00000550471 WTIPA6NIX2 430 aaPredicted RBP25.07■■□□□ 1.6
GCN1-207ENST00000550471 GTF2IP78347 998 aa25.07■■□□□ 1.6
GCN1-207ENST00000550471 ADM5C9JUS6 153 aa25.06■■□□□ 1.6
GCN1-207ENST00000550471 TAF5LO75529 589 aa25.06■■□□□ 1.6
GCN1-207ENST00000550471 RGMBQ6NW40 437 aa25.06■■□□□ 1.6
GCN1-207ENST00000550471 IRS2Q9Y4H2 1338 aa25.06■■□□□ 1.6
GCN1-207ENST00000550471 NF2P35240 595 aa25.05■■□□□ 1.6
GCN1-207ENST00000550471 GRM1Q13255 1194 aa25.05■■□□□ 1.6
GCN1-207ENST00000550471 REM2Q8IYK8 340 aaPredicted RBP25.05■■□□□ 1.6
GCN1-207ENST00000550471 CDCA5Q96FF9 252 aa25.05■■□□□ 1.6
GCN1-207ENST00000550471 API5Q9BZZ5 524 aaKnown RBP25.05■■□□□ 1.6
GCN1-207ENST00000550471 APOBEC3FQ8IUX4 373 aaKnown RBP25.04■■□□□ 1.6
GCN1-207ENST00000550471 HELBQ8NG08 1087 aaPredicted RBP25.04■■□□□ 1.6
GCN1-207ENST00000550471 CDCA7LQ96GN5 454 aa25.04■■□□□ 1.6
GCN1-207ENST00000550471 KAZALD1Q96I82 304 aa25.04■■□□□ 1.6
GCN1-207ENST00000550471 BICC1Q9H694 974 aaKnown RBP25.04■■□□□ 1.6
GCN1-207ENST00000550471 WNT10BO00744 389 aa25.03■■□□□ 1.6
GCN1-207ENST00000550471 SASH1O94885 1247 aa25.03■■□□□ 1.6
GCN1-207ENST00000550471 KLRK1P26718 216 aa25.03■■□□□ 1.6
GCN1-207ENST00000550471 MTMR14Q8NCE2 650 aa25.03■■□□□ 1.6
GCN1-207ENST00000550471 ZNF594Q96JF6 807 aaPredicted RBP25.03■■□□□ 1.6
GCN1-207ENST00000550471 PCNTO95613 3336 aa25.03■■□□□ 1.6
GCN1-207ENST00000550471 POLR2AP24928 1970 aaKnown RBP25.02■■□□□ 1.6
GCN1-207ENST00000550471 USP44Q9H0E7 712 aa25.02■■□□□ 1.6
GCN1-207ENST00000550471 RIPOR2Q9Y4F9 1068 aa25.02■■□□□ 1.6
GCN1-207ENST00000550471 MYO1BO43795 1136 aa25.01■■□□□ 1.59
GCN1-207ENST00000550471 PLIN1O60240 522 aa25.01■■□□□ 1.59
GCN1-207ENST00000550471 HSPA8P11142 646 aaKnown RBP25.01■■□□□ 1.59
GCN1-207ENST00000550471 LBX1P52954 281 aa25.01■■□□□ 1.59
GCN1-207ENST00000550471 KIAA0825Q8IV33 1275 aa25.01■■□□□ 1.59
GCN1-207ENST00000550471 HIBADHP31937 336 aaKnown RBP25■■□□□ 1.59
GCN1-207ENST00000550471 DLGAP5Q15398 846 aa25■■□□□ 1.59
GCN1-207ENST00000550471 NBPF9Q3BBW0 867 aa25■■□□□ 1.59
GCN1-207ENST00000550471 ARHGAP45Q92619 1136 aa25■■□□□ 1.59
GCN1-207ENST00000550471 KIF16BQ96L93 1317 aa25■■□□□ 1.59
GCN1-207ENST00000550471 AOC2O75106 756 aa24.99■■□□□ 1.59
GCN1-207ENST00000550471 COL1A1P02452 1464 aaPredicted RBP24.99■■□□□ 1.59
GCN1-207ENST00000550471 ZNF157P51786 506 aaPredicted RBP24.99■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.9 ms