RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 USP17L1Q7RTZ2 530 aa14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 PODNQ7Z5L7 613 aa14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 BSDC1Q9NW68 430 aaPredicted RBP14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 PAPPA2Q9BXP8 1791 aa14.93□□□□□ -0.02
SMARCD1-208ENST00000550280 PITPNM2Q9BZ72 1349 aa14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 TNRC18O15417 2968 aaPredicted RBP14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 G3V3G9 751 aa14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 H7C1W4 665 aa14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 DDX58O95786 925 aaKnown RBP14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 HSP90B1P14625 803 aaKnown RBP14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 CALD1Q05682 793 aaKnown RBP14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 DCAF8Q5TAQ9 597 aa14.92□□□□□ -0.02
SMARCD1-208ENST00000550280 CCT4P50991 539 aaKnown RBP14.91□□□□□ -0.02
SMARCD1-208ENST00000550280 CDC5LQ99459 802 aaKnown RBP14.91□□□□□ -0.02
SMARCD1-208ENST00000550280 SPEF2Q9C093 1822 aa14.91□□□□□ -0.02
SMARCD1-208ENST00000550280 IRS2Q9Y4H2 1338 aa14.91□□□□□ -0.02
SMARCD1-208ENST00000550280 UBE2Q2LH0YL09 131 aa14.9□□□□□ -0.02
SMARCD1-208ENST00000550280 WNT10BO00744 389 aa14.9□□□□□ -0.02
SMARCD1-208ENST00000550280 UBE3BQ7Z3V4 1068 aa14.9□□□□□ -0.02
SMARCD1-208ENST00000550280 SNAP23O00161 211 aa14.89□□□□□ -0.03
SMARCD1-208ENST00000550280 FKBP1BP68106 108 aa14.89□□□□□ -0.03
SMARCD1-208ENST00000550280 WWC1Q8IX03 1113 aa14.89□□□□□ -0.03
SMARCD1-208ENST00000550280 ZBED3Q96IU2 234 aaPredicted RBP14.89□□□□□ -0.03
SMARCD1-208ENST00000550280 PLA2G12BQ9BX93 195 aa14.89□□□□□ -0.03
SMARCD1-208ENST00000550280 SASH1O94885 1247 aa14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 SOX10P56693 466 aa14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 GCKRQ14397 625 aa14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 CCDC27Q2M243 656 aa14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 TWISTNBQ3B726 338 aaPredicted RBP14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 STRIP1Q5VSL9 837 aa14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 MYH3P11055 1940 aa14.88□□□□□ -0.03
SMARCD1-208ENST00000550280 SLC4A2P04920 1241 aa14.87□□□□□ -0.03
SMARCD1-208ENST00000550280 CSF1RP07333 972 aa14.87□□□□□ -0.03
SMARCD1-208ENST00000550280 ITGA6P23229 1130 aa14.87□□□□□ -0.03
SMARCD1-208ENST00000550280 COA1Q9GZY4 146 aa14.87□□□□□ -0.03
SMARCD1-208ENST00000550280 FLIIQ13045 1269 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 CTU1Q7Z7A3 348 aaKnown RBP14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 CERS5Q8N5B7 392 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 R3HDMLQ9H3Y0 253 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 FZD1Q9UP38 647 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 LEMD3Q9Y2U8 911 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 PCDHAC2Q9Y5I4 1007 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 ZNF804BA4D1E1 1349 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 AOX1Q06278 1338 aa14.86□□□□□ -0.03
SMARCD1-208ENST00000550280 TBC1D8O95759 1140 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 PTPN12Q05209 780 aaKnown RBP14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 CHRNDQ07001 517 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 NEXNQ0ZGT2 675 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 FBXW7Q969H0 707 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 STK31Q9BXU1 1019 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 AKAP11Q9UKA4 1901 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 SSC5DA1L4H1 1573 aa14.85□□□□□ -0.03
SMARCD1-208ENST00000550280 IGHMBP2P38935 993 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 TM4SF4P48230 202 aa14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 GTF2IP78347 998 aa14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 MKRN3Q13064 507 aaKnown RBP14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 TTLL5Q6EMB2 1281 aa14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 KIAA0825Q8IV33 1275 aa14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 ZNF296Q8WUU4 475 aaPredicted RBP14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 MYO3BQ8WXR4 1341 aa14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 FANCIQ9NVI1 1328 aa14.84□□□□□ -0.03
SMARCD1-208ENST00000550280 FOXO4P98177 505 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 LDLRAD1Q5T700 205 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 REM2Q8IYK8 340 aaPredicted RBP14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 DNAAF4Q8WXU2 420 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 CHMP4AQ9BY43 222 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 CD209Q9NNX6 404 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 HPS5Q9UPZ3 1129 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 IL16Q14005 1332 aa14.83□□□□□ -0.04
SMARCD1-208ENST00000550280 HTTP42858 3142 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 VAMP4O75379 141 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 TAF5LO75529 589 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 PRKG1Q13976 671 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 EPHA10Q5JZY3 1008 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 OGFOD1Q8N543 542 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 HELBQ8NG08 1087 aaPredicted RBP14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 LINS1Q8NG48 757 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 SPINK5Q9NQ38 1064 aaPredicted RBP14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 A0A1B0GUL6 1792 aa14.82□□□□□ -0.04
SMARCD1-208ENST00000550280 F6X3S4 739 aa14.81□□□□□ -0.04
SMARCD1-208ENST00000550280 FKBP5Q13451 457 aaPredicted RBP14.81□□□□□ -0.04
SMARCD1-208ENST00000550280 C15orf52Q6ZUT6 534 aaKnown RBP14.81□□□□□ -0.04
SMARCD1-208ENST00000550280 ANKRD2Q9GZV1 360 aa14.81□□□□□ -0.04
SMARCD1-208ENST00000550280 GPR25O00155 361 aa14.8□□□□□ -0.04
SMARCD1-208ENST00000550280 TTLL12Q14166 644 aaPredicted RBP14.8□□□□□ -0.04
SMARCD1-208ENST00000550280 BEND3Q5T5X7 828 aa14.8□□□□□ -0.04
SMARCD1-208ENST00000550280 MPHOSPH8Q99549 860 aa14.8□□□□□ -0.04
SMARCD1-208ENST00000550280 EXOSC9Q06265 439 aaKnown RBP14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 NCBP3Q53F19 620 aaKnown RBP14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 NOM1Q5C9Z4 860 aaKnown RBP14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 SPRYD7Q5W111 196 aa14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 APOBEC3FQ8IUX4 373 aaKnown RBP14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 MTMR14Q8NCE2 650 aa14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 CLMNQ96JQ2 1002 aa14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 CFHR5Q9BXR6 569 aa14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 MYH16Q9H6N6 1097 aa14.79□□□□□ -0.04
SMARCD1-208ENST00000550280 ANKRD18BA2A2Z9 1011 aa14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 IL1R1P14778 569 aa14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 MMP14P50281 582 aa14.78□□□□□ -0.04
SMARCD1-208ENST00000550280 MAP3K11Q16584 847 aa14.78□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms