RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 MAP2K2P36507 400 aa17.05■□□□□ 0.32
NUP188-211ENST00000550219 CCT4P50991 539 aaKnown RBP17.05■□□□□ 0.32
NUP188-211ENST00000550219 CDCA7LQ96GN5 454 aa17.05■□□□□ 0.32
NUP188-211ENST00000550219 HHIPL1Q96JK4 782 aa17.05■□□□□ 0.32
NUP188-211ENST00000550219 GBA2Q9HCG7 927 aaPredicted RBP17.05■□□□□ 0.32
NUP188-211ENST00000550219 USP17L3A6NCW0 530 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 USP17L4A6NCW7 530 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 F6X3S4 739 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 VAMP4O75379 141 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 ANGEL2Q5VTE6 544 aaKnown RBP17.04■□□□□ 0.32
NUP188-211ENST00000550219 USP17L1Q7RTZ2 530 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 C2orf69Q8N8R5 385 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 AGBL3Q8NEM8 1001 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 LINS1Q8NG48 757 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 MPHOSPH8Q99549 860 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 CHMP3Q9Y3E7 222 aa17.04■□□□□ 0.32
NUP188-211ENST00000550219 USP17L8P0C7I0 530 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 CASP7P55210 303 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 ZNF280AP59817 542 aaPredicted RBP17.03■□□□□ 0.32
NUP188-211ENST00000550219 SCARF1Q14162 830 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 PODNQ7Z5L7 613 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 CDCA5Q96FF9 252 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 MXD3Q9BW11 206 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 PLA2G12BQ9BX93 195 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 MYOZ2Q9NPC6 264 aa17.03■□□□□ 0.32
NUP188-211ENST00000550219 KLRK1P26718 216 aa17.02■□□□□ 0.32
NUP188-211ENST00000550219 KCNJ4P48050 445 aa17.02■□□□□ 0.32
NUP188-211ENST00000550219 BRPF1P55201 1214 aaPredicted RBP17.02■□□□□ 0.32
NUP188-211ENST00000550219 ZIC5Q96T25 663 aa17.02■□□□□ 0.32
NUP188-211ENST00000550219 SCAF8Q9UPN6 1271 aaKnown RBP17.02■□□□□ 0.32
NUP188-211ENST00000550219 ZNF646O15015 1829 aaPredicted RBP17.01■□□□□ 0.31
NUP188-211ENST00000550219 NOGQ13253 232 aa17.01■□□□□ 0.31
NUP188-211ENST00000550219 RGMBQ6NW40 437 aa17.01■□□□□ 0.31
NUP188-211ENST00000550219 TXNRD3Q86VQ6 643 aa17.01■□□□□ 0.31
NUP188-211ENST00000550219 GMLQ99445 158 aa17.01■□□□□ 0.31
NUP188-211ENST00000550219 ZNF804BA4D1E1 1349 aa17■□□□□ 0.31
NUP188-211ENST00000550219 ANKRD18BA2A2Z9 1011 aa17■□□□□ 0.31
NUP188-211ENST00000550219 ANKRD2Q9GZV1 360 aa17■□□□□ 0.31
NUP188-211ENST00000550219 COA1Q9GZY4 146 aa17■□□□□ 0.31
NUP188-211ENST00000550219 LEMD3Q9Y2U8 911 aa17■□□□□ 0.31
NUP188-211ENST00000550219 POLR2AP24928 1970 aaKnown RBP16.99■□□□□ 0.31
NUP188-211ENST00000550219 ZNF157P51786 506 aaPredicted RBP16.99■□□□□ 0.31
NUP188-211ENST00000550219 CHRNDQ07001 517 aa16.99■□□□□ 0.31
NUP188-211ENST00000550219 DACT2Q5SW24 774 aa16.99■□□□□ 0.31
NUP188-211ENST00000550219 ABHD8Q96I13 439 aa16.99■□□□□ 0.31
NUP188-211ENST00000550219 A0A1B0GUL6 1792 aa16.99■□□□□ 0.31
NUP188-211ENST00000550219 CACNA1FO60840 1977 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 PAPPA2Q9BXP8 1791 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 CA12O43570 354 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 SASH1O94885 1247 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 CSF1RP07333 972 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 BEND3Q5T5X7 828 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 OGFOD1Q8N543 542 aa16.98■□□□□ 0.31
NUP188-211ENST00000550219 MYO3BQ8WXR4 1341 aa16.97■□□□□ 0.31
NUP188-211ENST00000550219 FAM155AB1AL88 458 aaPredicted RBP16.97■□□□□ 0.31
NUP188-211ENST00000550219 SNAP23O00161 211 aa16.97■□□□□ 0.31
NUP188-211ENST00000550219 IFIT5Q13325 482 aaKnown RBP16.97■□□□□ 0.31
NUP188-211ENST00000550219 NBPF9Q3BBW0 867 aa16.97■□□□□ 0.31
NUP188-211ENST00000550219 TAF7LQ5H9L4 462 aa16.97■□□□□ 0.31
NUP188-211ENST00000550219 STRIP1Q5VSL9 837 aa16.97■□□□□ 0.31
NUP188-211ENST00000550219 SLC4A10Q6U841 1118 aa16.97■□□□□ 0.31
NUP188-211ENST00000550219 HELBQ8NG08 1087 aaPredicted RBP16.97■□□□□ 0.31
NUP188-211ENST00000550219 PITPNM2Q9BZ72 1349 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 TAF5LO75529 589 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 GTF2IP78347 998 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 FOXO4P98177 505 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 KIF23Q02241 960 aaPredicted RBP16.96■□□□□ 0.31
NUP188-211ENST00000550219 PRAMEF18Q5VWM3 479 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 KIAA0825Q8IV33 1275 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 CCDC102AQ96A19 550 aa16.96■□□□□ 0.31
NUP188-211ENST00000550219 GRM8O00222 908 aa16.95■□□□□ 0.3
NUP188-211ENST00000550219 SLC10A3P09131 477 aa16.95■□□□□ 0.3
NUP188-211ENST00000550219 TTLL12Q14166 644 aaPredicted RBP16.95■□□□□ 0.3
NUP188-211ENST00000550219 EPHA10Q5JZY3 1008 aa16.95■□□□□ 0.3
NUP188-211ENST00000550219 TTLL5Q6EMB2 1281 aa16.95■□□□□ 0.3
NUP188-211ENST00000550219 LMBR1LQ6UX01 489 aa16.95■□□□□ 0.3
NUP188-211ENST00000550219 C9orf78Q9NZ63 289 aaPredicted RBP16.95■□□□□ 0.3
NUP188-211ENST00000550219 WNT10BO00744 389 aa16.94■□□□□ 0.3
NUP188-211ENST00000550219 PLIN1O60240 522 aa16.94■□□□□ 0.3
NUP188-211ENST00000550219 MOB2Q70IA6 237 aa16.94■□□□□ 0.3
NUP188-211ENST00000550219 RASAL3Q86YV0 1011 aa16.94■□□□□ 0.3
NUP188-211ENST00000550219 ZNF594Q96JF6 807 aaPredicted RBP16.94■□□□□ 0.3
NUP188-211ENST00000550219 HDAC9Q9UKV0 1011 aa16.94■□□□□ 0.3
NUP188-211ENST00000550219 CCDC85CA6NKD9 419 aa16.93■□□□□ 0.3
NUP188-211ENST00000550219 CCDC57Q2TAC2 916 aa16.93■□□□□ 0.3
NUP188-211ENST00000550219 SRCIN1Q9C0H9 1055 aa16.93■□□□□ 0.3
NUP188-211ENST00000550219 CD209Q9NNX6 404 aa16.93■□□□□ 0.3
NUP188-211ENST00000550219 CNNM1Q9NRU3 951 aa16.93■□□□□ 0.3
NUP188-211ENST00000550219 CT47B1P0C2W7 299 aaPredicted RBP16.92■□□□□ 0.3
NUP188-211ENST00000550219 ZNF804AQ7Z570 1209 aa16.92■□□□□ 0.3
NUP188-211ENST00000550219 MCOLN1Q9GZU1 580 aa16.92■□□□□ 0.3
NUP188-211ENST00000550219 JAG2Q9Y219 1238 aa16.92■□□□□ 0.3
NUP188-211ENST00000550219 F8W031 263 aaPredicted RBP16.91■□□□□ 0.3
NUP188-211ENST00000550219 UBE2Q2LH0YL09 131 aa16.91■□□□□ 0.3
NUP188-211ENST00000550219 ALDH1L1O75891 902 aa16.91■□□□□ 0.3
NUP188-211ENST00000550219 NF2P35240 595 aa16.91■□□□□ 0.3
NUP188-211ENST00000550219 FKBP1BP68106 108 aa16.91■□□□□ 0.3
NUP188-211ENST00000550219 DGKZQ13574 1117 aa16.91■□□□□ 0.3
NUP188-211ENST00000550219 LDHAL6AQ6ZMR3 332 aa16.91■□□□□ 0.3
NUP188-211ENST00000550219 SUCLG2Q96I99 432 aa16.91■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms