RNA–Protein interactions for RNA: ENST00000550168.5

CACNB3-214, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, humanhuman

TSL 4

Gene CACNB3, Length 677 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNB3-214ENST00000550168 IFIT1P09914 478 aaKnown RBP15.2■□□□□ 0.02
CACNB3-214ENST00000550168 POLD1P28340 1107 aa15.2■□□□□ 0.02
CACNB3-214ENST00000550168 FSTL1Q12841 308 aa15.2■□□□□ 0.02
CACNB3-214ENST00000550168 RABEP1Q15276 862 aa15.2■□□□□ 0.02
CACNB3-214ENST00000550168 XAGE2Q96GT9 111 aa15.2■□□□□ 0.02
CACNB3-214ENST00000550168 ZFYP08048 801 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-214ENST00000550168 FGFR2P21802 821 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 TM4SF1P30408 202 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 TIMM10P62072 90 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 TTF1Q15361 905 aaPredicted RBP15.19■□□□□ 0.02
CACNB3-214ENST00000550168 DDX46Q7L014 1031 aaKnown RBP15.19■□□□□ 0.02
CACNB3-214ENST00000550168 KBTBD3Q8NAB2 608 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 SNX21Q969T3 373 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 ANKRD2Q9GZV1 360 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 ANO2Q9NQ90 1003 aa15.19■□□□□ 0.02
CACNB3-214ENST00000550168 ZBTB22O15209 634 aa15.18■□□□□ 0.02
CACNB3-214ENST00000550168 AMIGO3Q86WK7 504 aa15.18■□□□□ 0.02
CACNB3-214ENST00000550168 PAG1Q9NWQ8 432 aa15.18■□□□□ 0.02
CACNB3-214ENST00000550168 ARAP2Q8WZ64 1704 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 MAP4K4O95819 1239 aaPredicted RBP15.17■□□□□ 0.02
CACNB3-214ENST00000550168 UBE4AQ14139 1066 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 ZSCAN25Q6NSZ9 544 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 ERICH6Q7L0X2 663 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 TMC4Q7Z404 712 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 HSCBQ8IWL3 235 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 SEC31BQ9NQW1 1179 aa15.17■□□□□ 0.02
CACNB3-214ENST00000550168 IGSF3O75054 1194 aa15.16■□□□□ 0.02
CACNB3-214ENST00000550168 SERPINB2P05120 415 aa15.16■□□□□ 0.02
CACNB3-214ENST00000550168 ARID4AP29374 1257 aaPredicted RBP15.16■□□□□ 0.02
CACNB3-214ENST00000550168 RPS8P62241 208 aaKnown RBP15.16■□□□□ 0.02
CACNB3-214ENST00000550168 DNAJC2Q99543 621 aaKnown RBP15.16■□□□□ 0.02
CACNB3-214ENST00000550168 CHRNDQ07001 517 aa15.15■□□□□ 0.02
CACNB3-214ENST00000550168 PRR5LQ6MZQ0 368 aa15.15■□□□□ 0.02
CACNB3-214ENST00000550168 CWC27Q6UX04 472 aaKnown RBP15.15■□□□□ 0.02
CACNB3-214ENST00000550168 DDX24Q9GZR7 859 aaKnown RBP eCLIP15.15■□□□□ 0.02
CACNB3-214ENST00000550168 HELLSQ9NRZ9 838 aa15.15■□□□□ 0.02
CACNB3-214ENST00000550168 GNL3LQ9NVN8 582 aaKnown RBP15.15■□□□□ 0.02
CACNB3-214ENST00000550168 MED23Q9ULK4 1368 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 CCDC85CA6NKD9 419 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 ST18O60284 1047 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 HSPA4P34932 840 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 MCM2P49736 904 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 GRAPQ13588 217 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 ZNF827Q17R98 1081 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 CRY2Q49AN0 593 aa15.14■□□□□ 0.01
CACNB3-214ENST00000550168 TMED8Q6PL24 325 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-214ENST00000550168 GRAPLQ8TC17 118 aaPredicted RBP15.14■□□□□ 0.01
CACNB3-214ENST00000550168 RBM17Q96I25 401 aaKnown RBP15.14■□□□□ 0.01
CACNB3-214ENST00000550168 KLRG2A4D1S0 409 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-214ENST00000550168 POLRMTO00411 1230 aaKnown RBP15.13■□□□□ 0.01
CACNB3-214ENST00000550168 GOLIM4O00461 696 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 SEMA3EO15041 775 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 NMIQ13287 307 aaPredicted RBP15.13■□□□□ 0.01
CACNB3-214ENST00000550168 QSER1Q2KHR3 1735 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 RNF20Q5VTR2 975 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 CCDC102BQ68D86 513 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 SMIM5Q71RC9 77 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 RPGRQ92834 1020 aaKnown RBP15.13■□□□□ 0.01
CACNB3-214ENST00000550168 LSG1Q9H089 658 aaKnown RBP15.13■□□□□ 0.01
CACNB3-214ENST00000550168 CCDC171Q6TFL3 1326 aa15.13■□□□□ 0.01
CACNB3-214ENST00000550168 FOXN1O15353 648 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 ADORA1P30542 326 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 MCMDC2Q4G0Z9 681 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 CAVIN4Q5BKX8 364 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 COL23A1Q86Y22 540 aaPredicted RBP15.12■□□□□ 0.01
CACNB3-214ENST00000550168 KIF2CQ99661 725 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 HMG20BQ9P0W2 317 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 MINPP1Q9UNW1 487 aa15.12■□□□□ 0.01
CACNB3-214ENST00000550168 PDS5AQ29RF7 1337 aaKnown RBP15.12■□□□□ 0.01
CACNB3-214ENST00000550168 RNF113AO15541 343 aaKnown RBP15.11■□□□□ 0.01
CACNB3-214ENST00000550168 BBOX1O75936 387 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 ZKSCAN1P17029 563 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-214ENST00000550168 HOXA10P31260 410 aaPredicted RBP15.11■□□□□ 0.01
CACNB3-214ENST00000550168 C3orf67Q6ZVT6 689 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 CRAMP1Q96RY5 1269 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 BRIP1Q9BX63 1249 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 TBC1D2Q9BYX2 928 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 NMRK2Q9NPI5 230 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 PARP3Q9Y6F1 533 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 NRXN2Q9P2S2 1712 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 PNPLA7Q6ZV29 1317 aa15.11■□□□□ 0.01
CACNB3-214ENST00000550168 MSH5O43196 834 aa15.1■□□□□ 0.01
CACNB3-214ENST00000550168 KCNJ4P48050 445 aa15.1■□□□□ 0.01
CACNB3-214ENST00000550168 FKBP4Q02790 459 aaKnown RBP eCLIP15.1■□□□□ 0.01
CACNB3-214ENST00000550168 CELF1Q92879 486 aaKnown RBP15.1■□□□□ 0.01
CACNB3-214ENST00000550168 MAP4K1Q92918 833 aa15.1■□□□□ 0.01
CACNB3-214ENST00000550168 KCNB2Q92953 911 aa15.1■□□□□ 0.01
CACNB3-214ENST00000550168 LEMD3Q9Y2U8 911 aa15.1■□□□□ 0.01
CACNB3-214ENST00000550168 ZNF804BA4D1E1 1349 aa15.1■□□□□ 0.01
CACNB3-214ENST00000550168 TNRC6CQ9HCJ0 1690 aaKnown RBP15.09■□□□□ 0.01
CACNB3-214ENST00000550168 A0A0D9SFI3 127 aa15.09■□□□□ 0.01
CACNB3-214ENST00000550168 PDE6BP35913 854 aa15.09■□□□□ 0.01
CACNB3-214ENST00000550168 MCAMP43121 646 aa15.09■□□□□ 0.01
CACNB3-214ENST00000550168 DDR1Q08345 913 aa15.09■□□□□ 0.01
CACNB3-214ENST00000550168 ZMYM1Q5SVZ6 1142 aa15.09■□□□□ 0.01
CACNB3-214ENST00000550168 SLC16A10Q8TF71 515 aa15.09■□□□□ 0.01
CACNB3-214ENST00000550168 U3KPZ7 1027 aaPredicted RBP15.09■□□□□ 0.01
CACNB3-214ENST00000550168 ZAP70P43403 619 aa15.08■□□□□ 0
CACNB3-214ENST00000550168 PHKA1P46020 1223 aa15.08■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms