RNA–Protein interactions for RNA: ENST00000550102.5

CHMP1A-208, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 5 BASIC

Gene CHMP1A, Length 803 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-208ENST00000550102 HTRA3P83110 453 aa21.6■■□□□ 1.05
CHMP1A-208ENST00000550102 USP17L1Q7RTZ2 530 aa21.6■■□□□ 1.05
CHMP1A-208ENST00000550102 TXNRD3Q86VQ6 643 aa21.6■■□□□ 1.05
CHMP1A-208ENST00000550102 CNTROBQ8N137 903 aa21.6■■□□□ 1.05
CHMP1A-208ENST00000550102 MYH13Q9UKX3 1938 aa21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 SHTN1A0MZ66 631 aa21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 ITGBL1O95965 494 aaPredicted RBP21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 RSBN1LQ6PCB5 846 aaPredicted RBP21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 C15orf52Q6ZUT6 534 aaKnown RBP21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 AGBL3Q8NEM8 1001 aa21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 TRPM4Q8TD43 1214 aa21.59■■□□□ 1.05
CHMP1A-208ENST00000550102 MROH5Q6ZUA9 1318 aa21.58■■□□□ 1.05
CHMP1A-208ENST00000550102 IRS2Q9Y4H2 1338 aa21.58■■□□□ 1.05
CHMP1A-208ENST00000550102 PLIN1O60240 522 aa21.58■■□□□ 1.05
CHMP1A-208ENST00000550102 MEIS3Q99687 375 aa21.58■■□□□ 1.05
CHMP1A-208ENST00000550102 PUS3Q9BZE2 481 aaKnown RBP21.58■■□□□ 1.05
CHMP1A-208ENST00000550102 POLR2AP24928 1970 aaKnown RBP21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 SNAP23O00161 211 aa21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 ZKSCAN2Q63HK3 967 aa21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 ZNF804AQ7Z570 1209 aa21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 DNAJC5GQ8N7S2 189 aa21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 FBXW7Q969H0 707 aa21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 CREBZFQ9NS37 354 aa21.57■■□□□ 1.04
CHMP1A-208ENST00000550102 MYO3BQ8WXR4 1341 aa21.56■■□□□ 1.04
CHMP1A-208ENST00000550102 GNAI3P08754 354 aa21.56■■□□□ 1.04
CHMP1A-208ENST00000550102 ZC3H15Q8WU90 426 aaKnown RBP21.56■■□□□ 1.04
CHMP1A-208ENST00000550102 RIPOR2Q9Y4F9 1068 aa21.56■■□□□ 1.04
CHMP1A-208ENST00000550102 LRRFIP2Q9Y608 721 aaKnown RBP21.56■■□□□ 1.04
CHMP1A-208ENST00000550102 UBE4AQ14139 1066 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 TBC1D10BQ4KMP7 808 aaPredicted RBP21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 METTL24Q5JXM2 366 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 DACT2Q5SW24 774 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 STRIP1Q5VSL9 837 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 SAMD7Q7Z3H4 446 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 CLUAP1Q96AJ1 413 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 GMLQ99445 158 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 TNNQ9UQP3 1299 aa21.55■■□□□ 1.04
CHMP1A-208ENST00000550102 HIRAP54198 1017 aaPredicted RBP21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 ZNF280AP59817 542 aaPredicted RBP21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 KIF4BQ2VIQ3 1234 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 LRRC24Q50LG9 513 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 KLHDC4Q8TBB5 520 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 KLRG1Q96E93 195 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 CD209Q9NNX6 404 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 PGAP2Q9UHJ9 254 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 ECM29Q5VYK3 1845 aa21.54■■□□□ 1.04
CHMP1A-208ENST00000550102 TMEM88BA6NKF7 163 aa21.53■■□□□ 1.04
CHMP1A-208ENST00000550102 EGFRP00533 1210 aa21.53■■□□□ 1.04
CHMP1A-208ENST00000550102 USP17L8P0C7I0 530 aa21.53■■□□□ 1.04
CHMP1A-208ENST00000550102 RFX5P48382 616 aaPredicted RBP21.52■■□□□ 1.04
CHMP1A-208ENST00000550102 FTSJ3Q8IY81 847 aaKnown RBP21.52■■□□□ 1.04
CHMP1A-208ENST00000550102 IL1R1P14778 569 aa21.51■■□□□ 1.03
CHMP1A-208ENST00000550102 GTF2IP78347 998 aa21.51■■□□□ 1.03
CHMP1A-208ENST00000550102 PTPN12Q05209 780 aaKnown RBP21.51■■□□□ 1.03
CHMP1A-208ENST00000550102 TTLL5Q6EMB2 1281 aa21.51■■□□□ 1.03
CHMP1A-208ENST00000550102 VGLL2Q8N8G2 317 aa21.51■■□□□ 1.03
CHMP1A-208ENST00000550102 EYA2O00167 538 aa21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 TRAF5O00463 557 aa21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 PDE8BO95263 885 aa21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 RBM26Q5T8P6 1007 aaKnown RBP21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 TMEM57Q8N5G2 664 aa21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 MXD3Q9BW11 206 aa21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 FBXO3Q9UK99 471 aa21.5■■□□□ 1.03
CHMP1A-208ENST00000550102 PUM3Q15397 648 aaKnown RBP21.49■■□□□ 1.03
CHMP1A-208ENST00000550102 OGFOD1Q8N543 542 aa21.49■■□□□ 1.03
CHMP1A-208ENST00000550102 GLIS2Q9BZE0 524 aaPredicted RBP21.49■■□□□ 1.03
CHMP1A-208ENST00000550102 MYOZ2Q9NPC6 264 aa21.49■■□□□ 1.03
CHMP1A-208ENST00000550102 CIAO1O76071 339 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 GNAI2P04899 355 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 GYG1P46976 350 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 MMP14P50281 582 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 CDC37L1Q7L3B6 337 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 DZIP1LQ8IYY4 767 aaKnown RBP21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 SIL1Q9H173 461 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 GGA3Q9NZ52 723 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 CNTNAP1P78357 1384 aa21.48■■□□□ 1.03
CHMP1A-208ENST00000550102 HIBADHP31937 336 aaKnown RBP21.47■■□□□ 1.03
CHMP1A-208ENST00000550102 MTX1Q13505 466 aa21.47■■□□□ 1.03
CHMP1A-208ENST00000550102 JMYQ8N9B5 988 aa21.47■■□□□ 1.03
CHMP1A-208ENST00000550102 DCPSQ96C86 337 aaKnown RBP21.47■■□□□ 1.03
CHMP1A-208ENST00000550102 FMR1Q06787 632 aaKnown RBP eCLIP21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 ATG9AQ7Z3C6 839 aa21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 KRT26Q7Z3Y9 468 aa21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 VPS37DQ86XT2 251 aa21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 KIAA0825Q8IV33 1275 aa21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 FAM84BQ96KN1 310 aaPredicted RBP21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 HDAC9Q9UKV0 1011 aa21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 ABT1Q9ULW3 272 aaKnown RBP21.46■■□□□ 1.03
CHMP1A-208ENST00000550102 THSD7BQ9C0I4 1608 aa21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 SRGAP3O43295 1099 aa21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 IFIT1P09914 478 aaKnown RBP21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 FKBP1AP62942 108 aaKnown RBP21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 CAVIN4Q5BKX8 364 aa21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 ITPRIPQ8IWB1 547 aa21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 TDRD7Q8NHU6 1098 aaKnown RBP21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 COPRSQ9NQ92 184 aa21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 MKRN1Q9UHC7 482 aaKnown RBP21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 FAM205AQ6ZU69 1335 aa21.45■■□□□ 1.02
CHMP1A-208ENST00000550102 RLBP1P12271 317 aa21.44■■□□□ 1.02
CHMP1A-208ENST00000550102 SLC5A1P13866 664 aa21.44■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 110 ms