RNA–Protein interactions for RNA: ENST00000550020.6

TMEM116-209, Transcript of transmembrane protein 116, humanhuman

TSL 4

Gene TMEM116, Length 572 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM116-209ENST00000550020 SPATA31A1Q5TZJ5 1347 aa10.55□□□□□ -0.72
TMEM116-209ENST00000550020 E7EWF7 191 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 PDE8BO95263 885 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 SLC5A1P13866 664 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 GPTP24298 496 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 EXOSC10Q01780 885 aaKnown RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 DNM1Q05193 864 aaKnown RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 TRDNQ13061 729 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 UBE3CQ15386 1083 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 FOXD4L6Q3SYB3 417 aaPredicted RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 FOXD4L3Q6VB84 417 aaPredicted RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 BARGINQ6ZT62 677 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 NCOA7Q8NI08 942 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 LPIN2Q92539 896 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 PDLIM2Q96JY6 352 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 SPATA32Q96LK8 384 aa10.54□□□□□ -0.72
TMEM116-209ENST00000550020 ZNF396Q96N95 335 aaPredicted RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 SEC62Q99442 399 aaKnown RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 UTP14AQ9BVJ6 771 aaKnown RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 DDX19AQ9NUU7 478 aaKnown RBP10.54□□□□□ -0.72
TMEM116-209ENST00000550020 ROBO1Q9Y6N7 1651 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 ZNF213O14771 459 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 GADD45BO75293 160 aaPredicted RBP10.53□□□□□ -0.72
TMEM116-209ENST00000550020 CAVIN2O95810 425 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 CCDC192P0DO97 292 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 EIF5P55010 431 aaKnown RBP10.53□□□□□ -0.72
TMEM116-209ENST00000550020 EVCP57679 992 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 ST3GAL1Q11201 340 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 STK3Q13188 491 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 HLFQ16534 295 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 CCDC152Q4G0S7 254 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 AEBP2Q6ZN18 517 aaPredicted RBP10.53□□□□□ -0.72
TMEM116-209ENST00000550020 SMARCC2Q8TAQ2 1214 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 GDPD2Q9HCC8 539 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 ZBTB1Q9Y2K1 713 aa10.53□□□□□ -0.72
TMEM116-209ENST00000550020 RTL9Q8NET4 1388 aa10.52□□□□□ -0.72
TMEM116-209ENST00000550020 ATRNO75882 1429 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 RIC1Q4ADV7 1423 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 TPM3P06753 285 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 ARID4AP29374 1257 aaPredicted RBP10.52□□□□□ -0.73
TMEM116-209ENST00000550020 IGHMBP2P38935 993 aaKnown RBP10.52□□□□□ -0.73
TMEM116-209ENST00000550020 ZAP70P43403 619 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 MAP3K12Q12852 859 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 CPLX2Q6PUV4 134 aaKnown RBP10.52□□□□□ -0.73
TMEM116-209ENST00000550020 CDC37L1Q7L3B6 337 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 CDC5LQ99459 802 aaKnown RBP10.52□□□□□ -0.73
TMEM116-209ENST00000550020 MPHOSPH8Q99549 860 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 GREM2Q9H772 168 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 NSFL1CQ9UNZ2 370 aaKnown RBP10.52□□□□□ -0.73
TMEM116-209ENST00000550020 NDUFB9Q9Y6M9 179 aa10.52□□□□□ -0.73
TMEM116-209ENST00000550020 COL16A1Q07092 1604 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-209ENST00000550020 M0R2C6 588 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 CTAGE5O15320 804 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 CDKL5O76039 1030 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 GNAT2P19087 354 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 ADORA1P30542 326 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 ADD2P35612 726 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 ATP6V1AP38606 617 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 OSBP2Q969R2 916 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 TCEANC2Q96MN5 208 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 NUP62CLQ9H1M0 184 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 RRAGDQ9NQL2 400 aaPredicted RBP10.51□□□□□ -0.73
TMEM116-209ENST00000550020 ANKRD36CQ5JPF3 1778 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 ZMYM6O95789 1325 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 SPATA31A5Q5VU36 1347 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 SPATA31A7Q8IWB4 1347 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 ITGB4P16144 1822 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 WNK3Q9BYP7 1800 aa10.51□□□□□ -0.73
TMEM116-209ENST00000550020 LOC102724428A0A0B4J2F2 783 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 PTPDC1A2A3K4 754 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 GPAA1O43292 621 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 TOM1O60784 492 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 PTMAP06454 111 aaKnown RBP10.5□□□□□ -0.73
TMEM116-209ENST00000550020 CRKLP46109 303 aaKnown RBP10.5□□□□□ -0.73
TMEM116-209ENST00000550020 SIK1P57059 783 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 SCRN1Q12765 414 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 RESTQ13127 1097 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 ALX1Q15699 326 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 MAP3K11Q16584 847 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 SLC9C2Q5TAH2 1124 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 CLEC4GQ6UXB4 293 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 STOX1Q6ZVD7 989 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 VGLL2Q8N8G2 317 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 CHAMP1Q96JM3 812 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 NACAP1Q9BZK3 213 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 CNNM2Q9H8M5 875 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 GNL3LQ9NVN8 582 aaKnown RBP10.5□□□□□ -0.73
TMEM116-209ENST00000550020 NOL7Q9UMY1 257 aaKnown RBP10.5□□□□□ -0.73
TMEM116-209ENST00000550020 CICQ96RK0 1608 aaPredicted RBP10.5□□□□□ -0.73
TMEM116-209ENST00000550020 CARMIL3Q8ND23 1372 aa10.5□□□□□ -0.73
TMEM116-209ENST00000550020 LRP5O75197 1615 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 GOLGA6L6A8MZA4 724 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 CPLX1O14810 134 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 PRC1O43663 620 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 FGAP02671 866 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 PDIA3P30101 505 aaKnown RBP10.49□□□□□ -0.73
TMEM116-209ENST00000550020 APOBRQ0VD83 1088 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 CCDC102BQ68D86 513 aa10.49□□□□□ -0.73
TMEM116-209ENST00000550020 INTS5Q6P9B9 1019 aaKnown RBP10.49□□□□□ -0.73
TMEM116-209ENST00000550020 TMED8Q6PL24 325 aaPredicted RBP10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms