RNA–Protein interactions for RNA: ENST00000549915.5

RAB5B-207, Transcript of RAB5B, member RAS oncogene family, humanhuman

TSL 4

Gene RAB5B, Length 494 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5B-207ENST00000549915 TSPAN10Q9H1Z9 355 aaPredicted RBP4.75□□□□□ -1.65
RAB5B-207ENST00000549915 PDCL3Q9H2J4 239 aa4.75□□□□□ -1.65
RAB5B-207ENST00000549915 MYH16Q9H6N6 1097 aa4.75□□□□□ -1.65
RAB5B-207ENST00000549915 ZNF777Q9ULD5 760 aaPredicted RBP4.75□□□□□ -1.65
RAB5B-207ENST00000549915 TRPM2O94759 1503 aa4.75□□□□□ -1.65
RAB5B-207ENST00000549915 POLR3AO14802 1390 aaPredicted RBP4.75□□□□□ -1.65
RAB5B-207ENST00000549915 SBNO2Q9Y2G9 1366 aa4.75□□□□□ -1.65
RAB5B-207ENST00000549915 IQSEC2Q5JU85 1478 aa4.75□□□□□ -1.65
RAB5B-207ENST00000549915 ARHGAP31Q2M1Z3 1444 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 YEATS2Q9ULM3 1422 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 BNIP3LO60238 219 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 CT47B1P0C2W7 299 aaPredicted RBP4.74□□□□□ -1.65
RAB5B-207ENST00000549915 EPB42P16452 691 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 RFX1P22670 979 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 DPYDQ12882 1025 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 IER5Q5VY09 327 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 MTERF4Q7Z6M4 381 aaKnown RBP4.74□□□□□ -1.65
RAB5B-207ENST00000549915 SKAP1Q86WV1 359 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 BEND7Q8N7W2 519 aaPredicted RBP4.74□□□□□ -1.65
RAB5B-207ENST00000549915 TSEN2Q8NCE0 465 aaKnown RBP4.74□□□□□ -1.65
RAB5B-207ENST00000549915 ZDHHC1Q8WTX9 485 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 TRIM44Q96DX7 344 aaPredicted RBP4.74□□□□□ -1.65
RAB5B-207ENST00000549915 ABHD17AQ96GS6 310 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 GBP4Q96PP9 640 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 SLKQ9H2G2 1235 aaPredicted RBP4.74□□□□□ -1.65
RAB5B-207ENST00000549915 GRPEL1Q9HAV7 217 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 MARK1Q9P0L2 795 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 MYO3AQ8NEV4 1616 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 USP32Q8NFA0 1604 aa4.74□□□□□ -1.65
RAB5B-207ENST00000549915 CEP152O94986 1710 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 PLEKHD1A6NEE1 506 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 SFI1A8K8P3 1242 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 KHNYNO15037 678 aaKnown RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 MAPTP10636 758 aaKnown RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 CANXP27824 592 aaKnown RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 CALD1Q05682 793 aaKnown RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 TNP2Q05952 138 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 CCDC173Q0VFZ6 552 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 RTN1Q16799 776 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 CRTC2Q53ET0 693 aaPredicted RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 HS1BP3Q53T59 392 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 CFAP70Q5T0N1 1121 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 LYPD4Q6UWN0 246 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 PDZRN4Q6ZMN7 1036 aaPredicted RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 HSCBQ8IWL3 235 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 SNX21Q969T3 373 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 ACDQ96AP0 544 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 KLRG1Q96E93 195 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 HINFPQ9BQA5 517 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 C2orf49Q9BVC5 232 aaPredicted RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 RWDD1Q9H446 243 aaPredicted RBP4.73□□□□□ -1.65
RAB5B-207ENST00000549915 C11orf16Q9NQ32 467 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 PRR12Q9ULL5 1215 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 USP3Q9Y6I4 520 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 ATAD2Q6PL18 1390 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 ATP10BO94823 1461 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 MYOM2P54296 1465 aa4.73□□□□□ -1.65
RAB5B-207ENST00000549915 KIF16BQ96L93 1317 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 DCDC2BA2VCK2 349 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 EFSO43281 561 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 DKK1O94907 266 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 IGHDP01880 384 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 THBS1P07996 1170 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 TXLNAP40222 546 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 KCNQ4P56696 695 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 CCDC27Q2M243 656 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 ZNF468Q5VIY5 522 aaPredicted RBP4.72□□□□□ -1.65
RAB5B-207ENST00000549915 WDR63Q8IWG1 891 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 SCG3Q8WXD2 468 aaKnown RBP4.72□□□□□ -1.65
RAB5B-207ENST00000549915 ANP32BQ92688 251 aaKnown RBP4.72□□□□□ -1.65
RAB5B-207ENST00000549915 PPP1R9BQ96SB3 815 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 C22orf23Q9BZE7 217 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 PHACTR1Q9C0D0 580 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 MKL2Q9ULH7 1088 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 ADGRB2O60241 1585 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 CDC42BPBQ9Y5S2 1711 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 SYCP2Q9BX26 1530 aa4.72□□□□□ -1.65
RAB5B-207ENST00000549915 SHPRHQ149N8 1683 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 INO80Q9ULG1 1556 aaPredicted RBP4.71□□□□□ -1.66
RAB5B-207ENST00000549915 ERCC6Q03468 1493 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 GOLGA6L22H0YM25 854 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 ATG7O95352 703 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 ALAS2P22557 587 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 DDIT3P35638 169 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 RBM25P49756 843 aaKnown RBP4.71□□□□□ -1.66
RAB5B-207ENST00000549915 LRRC69Q6ZNQ3 347 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 CLEC17AQ6ZS10 378 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 ZSCAN30Q86W11 494 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 SMC5Q8IY18 1101 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 ALDH16A1Q8IZ83 802 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 TMEM151AQ8N4L1 468 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 EDARADDQ8WWZ3 215 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 PBXIP1Q96AQ6 731 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 NOP53Q9NZM5 478 aaKnown RBP4.71□□□□□ -1.66
RAB5B-207ENST00000549915 NOVA2Q9UNW9 492 aaKnown RBP4.71□□□□□ -1.66
RAB5B-207ENST00000549915 PARP3Q9Y6F1 533 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 DNMT3AQ9Y6K1 912 aaPredicted RBP4.71□□□□□ -1.66
RAB5B-207ENST00000549915 PTPRTO14522 1441 aa4.71□□□□□ -1.66
RAB5B-207ENST00000549915 CFAP74Q9C0B2 1584 aa4.7□□□□□ -1.66
RAB5B-207ENST00000549915 SETBP1Q9Y6X0 1596 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms