RNA–Protein interactions for RNA: ENST00000549752.1

CCDC38-207, Transcript of coiled-coil domain containing 38, humanhuman

TSL 3

Gene CCDC38, Length 476 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-207ENST00000549752 TPRNQ4KMQ1 711 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 PODNQ7Z5L7 613 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 SRCIN1Q9C0H9 1055 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 MINPP1Q9UNW1 487 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 ZNF609O15014 1411 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 CNTNAP1P78357 1384 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 MED23Q9ULK4 1368 aa13.2□□□□□ -0.3
CCDC38-207ENST00000549752 VIL1P09327 827 aaKnown RBP13.19□□□□□ -0.3
CCDC38-207ENST00000549752 CT47B1P0C2W7 299 aaPredicted RBP13.19□□□□□ -0.3
CCDC38-207ENST00000549752 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
CCDC38-207ENST00000549752 CCT4P50991 539 aaKnown RBP13.19□□□□□ -0.3
CCDC38-207ENST00000549752 SLFN5Q08AF3 891 aa13.19□□□□□ -0.3
CCDC38-207ENST00000549752 FAM161AQ3B820 660 aa13.19□□□□□ -0.3
CCDC38-207ENST00000549752 SLC4A10Q6U841 1118 aa13.19□□□□□ -0.3
CCDC38-207ENST00000549752 MICALL2Q8IY33 904 aa13.19□□□□□ -0.3
CCDC38-207ENST00000549752 CHMP3Q9Y3E7 222 aa13.19□□□□□ -0.3
CCDC38-207ENST00000549752 ZNF646O15015 1829 aaPredicted RBP13.18□□□□□ -0.3
CCDC38-207ENST00000549752 ECM29Q5VYK3 1845 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 STK25O00506 426 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 KCNJ4P48050 445 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 CCDC57Q2TAC2 916 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 ALDH1L2Q3SY69 923 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 TAF7LQ5H9L4 462 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 CDC37L1Q7L3B6 337 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 AGBL3Q8NEM8 1001 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 MKRN1Q9UHC7 482 aaKnown RBP13.18□□□□□ -0.3
CCDC38-207ENST00000549752 PGAP2Q9UHJ9 254 aa13.18□□□□□ -0.3
CCDC38-207ENST00000549752 ABT1Q9ULW3 272 aaKnown RBP13.18□□□□□ -0.3
CCDC38-207ENST00000549752 USP17L3A6NCW0 530 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 USP17L4A6NCW7 530 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 MMP14P50281 582 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 DEFB115Q30KQ5 88 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 USP17L1Q7RTZ2 530 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 GPR101Q96P66 508 aaPredicted RBP13.17□□□□□ -0.3
CCDC38-207ENST00000549752 COA1Q9GZY4 146 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 MYH13Q9UKX3 1938 aa13.17□□□□□ -0.3
CCDC38-207ENST00000549752 ZNF804BA4D1E1 1349 aa13.16□□□□□ -0.3
CCDC38-207ENST00000549752 MYO3BQ8WXR4 1341 aa13.16□□□□□ -0.3
CCDC38-207ENST00000549752 RASSF10A6NK89 507 aa13.16□□□□□ -0.3
CCDC38-207ENST00000549752 ECE1P42892 770 aa13.16□□□□□ -0.3
CCDC38-207ENST00000549752 RSBN1LQ6PCB5 846 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-207ENST00000549752 REM2Q8IYK8 340 aaPredicted RBP13.16□□□□□ -0.3
CCDC38-207ENST00000549752 MRPL50Q8N5N7 158 aaKnown RBP13.16□□□□□ -0.3
CCDC38-207ENST00000549752 DCPSQ96C86 337 aaKnown RBP13.16□□□□□ -0.3
CCDC38-207ENST00000549752 FOXO4P98177 505 aa13.15□□□□□ -0.3
CCDC38-207ENST00000549752 CHRNDQ07001 517 aa13.15□□□□□ -0.3
CCDC38-207ENST00000549752 LMBR1LQ6UX01 489 aa13.15□□□□□ -0.3
CCDC38-207ENST00000549752 TRPM4Q8TD43 1214 aa13.15□□□□□ -0.3
CCDC38-207ENST00000549752 AKAP11Q9UKA4 1901 aa13.15□□□□□ -0.3
CCDC38-207ENST00000549752 HSPA1AP0DMV8 641 aaKnown RBP13.14□□□□□ -0.31
CCDC38-207ENST00000549752 HSPA1BP0DMV9 641 aaKnown RBP13.14□□□□□ -0.31
CCDC38-207ENST00000549752 HIRAP54198 1017 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-207ENST00000549752 KIF4BQ2VIQ3 1234 aa13.14□□□□□ -0.31
CCDC38-207ENST00000549752 TBC1D10BQ4KMP7 808 aaPredicted RBP13.14□□□□□ -0.31
CCDC38-207ENST00000549752 SAMD7Q7Z3H4 446 aa13.14□□□□□ -0.31
CCDC38-207ENST00000549752 OGFOD1Q8N543 542 aa13.14□□□□□ -0.31
CCDC38-207ENST00000549752 SSH1Q8WYL5 1049 aa13.14□□□□□ -0.31
CCDC38-207ENST00000549752 KCNQ5Q9NR82 932 aa13.14□□□□□ -0.31
CCDC38-207ENST00000549752 SMC4Q9NTJ3 1288 aa13.14□□□□□ -0.31
CCDC38-207ENST00000549752 UTYO14607 1347 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 CELF2O95319 508 aaKnown RBP13.13□□□□□ -0.31
CCDC38-207ENST00000549752 USP17L8P0C7I0 530 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 ZNF280AP59817 542 aaPredicted RBP13.13□□□□□ -0.31
CCDC38-207ENST00000549752 STRIP1Q5VSL9 837 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 LDHAL6AQ6ZMR3 332 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 AIDAQ96BJ3 306 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 HHIPL1Q96JK4 782 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 GLIS2Q9BZE0 524 aaPredicted RBP13.13□□□□□ -0.31
CCDC38-207ENST00000549752 CNNM1Q9NRU3 951 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 HDAC5Q9UQL6 1122 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 THSD7BQ9C0I4 1608 aa13.13□□□□□ -0.31
CCDC38-207ENST00000549752 TRAF5O00463 557 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 VEGFBP49765 207 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 MAP2K1Q02750 393 aaPredicted RBP13.12□□□□□ -0.31
CCDC38-207ENST00000549752 RBM26Q5T8P6 1007 aaKnown RBP13.12□□□□□ -0.31
CCDC38-207ENST00000549752 C15orf52Q6ZUT6 534 aaKnown RBP13.12□□□□□ -0.31
CCDC38-207ENST00000549752 KRT26Q7Z3Y9 468 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 ZNF804AQ7Z570 1209 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 SULF1Q8IWU6 871 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 TRMT2AQ8IZ69 625 aaKnown RBP13.12□□□□□ -0.31
CCDC38-207ENST00000549752 FBXW7Q969H0 707 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 CDCA7LQ96GN5 454 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 HDAC9Q9UKV0 1011 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 TLL2Q9Y6L7 1015 aa13.12□□□□□ -0.31
CCDC38-207ENST00000549752 WDR33Q9C0J8 1336 aaKnown RBP13.12□□□□□ -0.31
CCDC38-207ENST00000549752 ARAP2Q8WZ64 1704 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 SHTN1A0MZ66 631 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 CST9Q5W186 159 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 TTLL5Q6EMB2 1281 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 MYOZ2Q9NPC6 264 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 PITPNM2Q9BZ72 1349 aa13.11□□□□□ -0.31
CCDC38-207ENST00000549752 NBPF7P0C2Y1 421 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-207ENST00000549752 MNX1P50219 401 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-207ENST00000549752 BRPF1P55201 1214 aaPredicted RBP13.1□□□□□ -0.31
CCDC38-207ENST00000549752 EPHA10Q5JZY3 1008 aa13.1□□□□□ -0.31
CCDC38-207ENST00000549752 DACT2Q5SW24 774 aa13.1□□□□□ -0.31
CCDC38-207ENST00000549752 IFFO2Q5TF58 517 aa13.1□□□□□ -0.31
CCDC38-207ENST00000549752 DIEXFQ68CQ4 756 aaKnown RBP13.1□□□□□ -0.31
CCDC38-207ENST00000549752 USP48Q86UV5 1035 aa13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 63.9 ms