RNA–Protein interactions for RNA: ENST00000549358.5

TRAFD1-206, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 4

Gene TRAFD1, Length 532 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-206ENST00000549358 TRIM17Q9Y577 477 aa14.08□□□□□ -0.16
TRAFD1-206ENST00000549358 WTIPA6NIX2 430 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 CHL1O00533 1208 aa14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 TMPOP42166 694 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 LMOD3Q0VAK6 560 aa14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 INTS3Q68E01 1043 aaKnown RBP14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 ARMC9Q7Z3E5 817 aa14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 OGFOD1Q8N543 542 aa14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 ZBTB38Q8NAP3 1195 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 ZBTB4Q9P1Z0 1013 aaPredicted RBP14.07□□□□□ -0.16
TRAFD1-206ENST00000549358 WNT10BO00744 389 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 ALDH1A1P00352 501 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 ATP2B4P23634 1241 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 NEUROD2Q15784 382 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 CCDC152Q4G0S7 254 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 RIC3Q7Z5B4 369 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 FBXW7Q969H0 707 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 XDHP47989 1333 aa14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 MKI67P46013 3256 aaKnown RBP14.06□□□□□ -0.16
TRAFD1-206ENST00000549358 SASH1O94885 1247 aa14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 HSP90B1P14625 803 aaKnown RBP14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 FXR1P51114 621 aaKnown RBP eCLIP14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 DACT2Q5SW24 774 aa14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 SPRYD7Q5W111 196 aa14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 OTOP1Q7RTM1 612 aa14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 ANKRD18AQ8IVF6 992 aa14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 JARID2Q92833 1246 aaPredicted RBP14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 HYPKQ9NX55 129 aa14.05□□□□□ -0.16
TRAFD1-206ENST00000549358 EN2P19622 333 aaPredicted RBP14.04□□□□□ -0.16
TRAFD1-206ENST00000549358 INHBEP58166 350 aa14.04□□□□□ -0.16
TRAFD1-206ENST00000549358 LDLRAD1Q5T700 205 aa14.04□□□□□ -0.16
TRAFD1-206ENST00000549358 ANGEL1Q9UNK9 670 aaKnown RBP14.04□□□□□ -0.16
TRAFD1-206ENST00000549358 FZD1Q9UP38 647 aa14.04□□□□□ -0.16
TRAFD1-206ENST00000549358 PDE8AO60658 829 aa14.03□□□□□ -0.16
TRAFD1-206ENST00000549358 IFNL1Q8IU54 200 aa14.03□□□□□ -0.16
TRAFD1-206ENST00000549358 SLC10A4Q96EP9 437 aa14.03□□□□□ -0.16
TRAFD1-206ENST00000549358 MYD88Q99836 296 aa14.03□□□□□ -0.16
TRAFD1-206ENST00000549358 PTPN22Q9Y2R2 807 aa14.03□□□□□ -0.16
TRAFD1-206ENST00000549358 MANSC4A6NHS7 340 aaPredicted RBP14.02□□□□□ -0.17
TRAFD1-206ENST00000549358 HOXB7P09629 217 aa14.02□□□□□ -0.17
TRAFD1-206ENST00000549358 GOLGA2Q08379 1002 aa14.02□□□□□ -0.17
TRAFD1-206ENST00000549358 CHRDL2Q6WN34 429 aa14.02□□□□□ -0.17
TRAFD1-206ENST00000549358 CENPFP49454 3210 aa14.02□□□□□ -0.17
TRAFD1-206ENST00000549358 HTTP42858 3142 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 MYO3BQ8WXR4 1341 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 IGF2BP3O00425 579 aaKnown RBP eCLIP14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 PCCAP05165 728 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 STRIP1Q5VSL9 837 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 DUSP27Q5VZP5 1158 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 APOBEC3FQ8IUX4 373 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 KIAA0825Q8IV33 1275 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 CCDC146Q8IYE0 955 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 ERO1AQ96HE7 468 aa14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 PHAXQ9H814 394 aaKnown RBP14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 COLQQ9Y215 455 aaPredicted RBP14.01□□□□□ -0.17
TRAFD1-206ENST00000549358 MED23Q9ULK4 1368 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 CCDC191Q8NCU4 936 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 CD99L2Q8TCZ2 262 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 CLMNQ96JQ2 1002 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 COA1Q9GZY4 146 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 DEFB129Q9H1M3 183 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 CWC25Q9NXE8 425 aaPredicted RBP14□□□□□ -0.17
TRAFD1-206ENST00000549358 MINPP1Q9UNW1 487 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 TRIM35Q9UPQ4 493 aa14□□□□□ -0.17
TRAFD1-206ENST00000549358 MMP14P50281 582 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 CCT4P50991 539 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 TTLL5Q6EMB2 1281 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 TXNRD3Q86VQ6 643 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 ARMC5Q96C12 935 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 WNK4Q96J92 1243 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 CDC5LQ99459 802 aaKnown RBP13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 TMEM106CQ9BVX2 250 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 EFCC1Q9HA90 598 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 BRCA2P51587 3418 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 PSME4Q14997 1843 aa13.99□□□□□ -0.17
TRAFD1-206ENST00000549358 ZBTB48P10074 688 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-206ENST00000549358 CRHR2Q13324 411 aa13.98□□□□□ -0.17
TRAFD1-206ENST00000549358 BSDC1Q9NW68 430 aaPredicted RBP13.98□□□□□ -0.17
TRAFD1-206ENST00000549358 PPP1R12BO60237 982 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-206ENST00000549358 GTF2IP78347 998 aa13.97□□□□□ -0.17
TRAFD1-206ENST00000549358 SP3Q02447 781 aa13.97□□□□□ -0.17
TRAFD1-206ENST00000549358 MAP3K11Q16584 847 aa13.97□□□□□ -0.17
TRAFD1-206ENST00000549358 OTUD7BQ6GQQ9 843 aa13.97□□□□□ -0.17
TRAFD1-206ENST00000549358 ZBED3Q96IU2 234 aaPredicted RBP13.97□□□□□ -0.17
TRAFD1-206ENST00000549358 ELL2O00472 640 aaPredicted RBP13.96□□□□□ -0.17
TRAFD1-206ENST00000549358 CTSWP56202 376 aa13.96□□□□□ -0.17
TRAFD1-206ENST00000549358 CAP1Q01518 475 aa13.96□□□□□ -0.17
TRAFD1-206ENST00000549358 DLGAP5Q15398 846 aa13.96□□□□□ -0.17
TRAFD1-206ENST00000549358 TTLL11Q8NHH1 800 aa13.96□□□□□ -0.17
TRAFD1-206ENST00000549358 GREM2Q9H772 168 aa13.96□□□□□ -0.17
TRAFD1-206ENST00000549358 KLRK1P26718 216 aa13.95□□□□□ -0.18
TRAFD1-206ENST00000549358 PTPN18Q99952 460 aa13.95□□□□□ -0.18
TRAFD1-206ENST00000549358 METTL22Q9BUU2 404 aaPredicted RBP13.95□□□□□ -0.18
TRAFD1-206ENST00000549358 MBIPQ9NS73 344 aa13.95□□□□□ -0.18
TRAFD1-206ENST00000549358 LEMD3Q9Y2U8 911 aa13.95□□□□□ -0.18
TRAFD1-206ENST00000549358 ZNF804BA4D1E1 1349 aa13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 MYCP01106 439 aaPredicted RBP13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 SLC4A8Q2Y0W8 1093 aa13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 SUPT20HL1Q3ZLR7 823 aa13.94□□□□□ -0.18
TRAFD1-206ENST00000549358 NBPF11Q86T75 865 aa13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms