RNA–Protein interactions for RNA: ENST00000549271.1

DDX54-206, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 756 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-206ENST00000549271 WNT10BO00744 389 aa15.84■□□□□ 0.13
DDX54-206ENST00000549271 PODNQ7Z5L7 613 aa15.84■□□□□ 0.13
DDX54-206ENST00000549271 ERO1AQ96HE7 468 aa15.84■□□□□ 0.13
DDX54-206ENST00000549271 SEC31BQ9NQW1 1179 aa15.84■□□□□ 0.13
DDX54-206ENST00000549271 ZNF316A6NFI3 1004 aaPredicted RBP15.83■□□□□ 0.12
DDX54-206ENST00000549271 IRS4O14654 1257 aaPredicted RBP15.83■□□□□ 0.12
DDX54-206ENST00000549271 HOXB7P09629 217 aa15.83■□□□□ 0.12
DDX54-206ENST00000549271 PLBD2Q8NHP8 589 aa15.83■□□□□ 0.12
DDX54-206ENST00000549271 CD99L2Q8TCZ2 262 aa15.83■□□□□ 0.12
DDX54-206ENST00000549271 RUNDC1Q96C34 613 aa15.83■□□□□ 0.12
DDX54-206ENST00000549271 ADAMTS8Q9UP79 889 aa15.83■□□□□ 0.12
DDX54-206ENST00000549271 TRIM35Q9UPQ4 493 aa15.83■□□□□ 0.12
DDX54-206ENST00000549271 ATP5J2-PTCD1G3V325 749 aa15.82■□□□□ 0.12
DDX54-206ENST00000549271 H0YGN5 161 aa15.82■□□□□ 0.12
DDX54-206ENST00000549271 CAP1Q01518 475 aa15.82■□□□□ 0.12
DDX54-206ENST00000549271 PRKG1Q13976 671 aa15.82■□□□□ 0.12
DDX54-206ENST00000549271 RTL5Q5HYW3 569 aaPredicted RBP15.82■□□□□ 0.12
DDX54-206ENST00000549271 ZNF333Q96JL9 665 aa15.82■□□□□ 0.12
DDX54-206ENST00000549271 ZBTB48P10074 688 aaPredicted RBP15.81■□□□□ 0.12
DDX54-206ENST00000549271 XDHP47989 1333 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 TRIM28Q13263 835 aaKnown RBP15.81■□□□□ 0.12
DDX54-206ENST00000549271 DACT2Q5SW24 774 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 ANKRD13DQ6ZTN6 518 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 CUL9Q8IWT3 2517 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 CCDC146Q8IYE0 955 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 TMEM106CQ9BVX2 250 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 EFCC1Q9HA90 598 aa15.81■□□□□ 0.12
DDX54-206ENST00000549271 ANGEL1Q9UNK9 670 aaKnown RBP15.81■□□□□ 0.12
DDX54-206ENST00000549271 COL1A1P02452 1464 aaPredicted RBP15.8■□□□□ 0.12
DDX54-206ENST00000549271 SASH1O94885 1247 aa15.8■□□□□ 0.12
DDX54-206ENST00000549271 CRHR2Q13324 411 aa15.8■□□□□ 0.12
DDX54-206ENST00000549271 MAP3K11Q16584 847 aa15.8■□□□□ 0.12
DDX54-206ENST00000549271 KRT24Q2M2I5 525 aa15.8■□□□□ 0.12
DDX54-206ENST00000549271 APOBEC3FQ8IUX4 373 aaKnown RBP15.8■□□□□ 0.12
DDX54-206ENST00000549271 OGFOD1Q8N543 542 aa15.8■□□□□ 0.12
DDX54-206ENST00000549271 WNK4Q96J92 1243 aa15.8■□□□□ 0.12
DDX54-206ENST00000549271 MYO3BQ8WXR4 1341 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 MMP14P50281 582 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 WDR43Q15061 677 aaKnown RBP eCLIP15.79■□□□□ 0.12
DDX54-206ENST00000549271 NEUROD2Q15784 382 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 SLC10A4Q96EP9 437 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 MXD3Q9BW11 206 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 CHPF2Q9P2E5 772 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 DBF4Q9UBU7 674 aaPredicted RBP15.79■□□□□ 0.12
DDX54-206ENST00000549271 FZD1Q9UP38 647 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 ECM29Q5VYK3 1845 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 SSC5DA1L4H1 1573 aa15.79■□□□□ 0.12
DDX54-206ENST00000549271 MED23Q9ULK4 1368 aa15.78■□□□□ 0.12
DDX54-206ENST00000549271 ATP2B4P23634 1241 aa15.78■□□□□ 0.12
DDX54-206ENST00000549271 SP3Q02447 781 aa15.78■□□□□ 0.12
DDX54-206ENST00000549271 HDGFL1Q5TGJ6 251 aa15.78■□□□□ 0.12
DDX54-206ENST00000549271 SLC17A8Q8NDX2 589 aa15.78■□□□□ 0.12
DDX54-206ENST00000549271 ZBED3Q96IU2 234 aaPredicted RBP15.78■□□□□ 0.12
DDX54-206ENST00000549271 CLMNQ96JQ2 1002 aa15.78■□□□□ 0.12
DDX54-206ENST00000549271 WTIPA6NIX2 430 aaPredicted RBP15.77■□□□□ 0.12
DDX54-206ENST00000549271 CCDC184Q52MB2 194 aa15.77■□□□□ 0.12
DDX54-206ENST00000549271 STRIP1Q5VSL9 837 aa15.77■□□□□ 0.12
DDX54-206ENST00000549271 CHRDL2Q6WN34 429 aa15.77■□□□□ 0.12
DDX54-206ENST00000549271 ZBTB38Q8NAP3 1195 aaPredicted RBP15.77■□□□□ 0.12
DDX54-206ENST00000549271 SPEF2Q9C093 1822 aa15.76■□□□□ 0.11
DDX54-206ENST00000549271 UNCXA6NJT0 531 aa15.76■□□□□ 0.11
DDX54-206ENST00000549271 CCDC152Q4G0S7 254 aa15.76■□□□□ 0.11
DDX54-206ENST00000549271 PTPN18Q99952 460 aa15.76■□□□□ 0.11
DDX54-206ENST00000549271 HYPKQ9NX55 129 aa15.76■□□□□ 0.11
DDX54-206ENST00000549271 RBM27Q9P2N5 1060 aaKnown RBP15.76■□□□□ 0.11
DDX54-206ENST00000549271 LAS1LQ9Y4W2 734 aaKnown RBP15.76■□□□□ 0.11
DDX54-206ENST00000549271 TESPA1A2RU30 521 aaPredicted RBP15.75■□□□□ 0.11
DDX54-206ENST00000549271 ZNF853P0CG23 659 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 GJA5P36382 358 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 SLC9C1Q4G0N8 1177 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 OTUD7BQ6GQQ9 843 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 NBPF11Q86T75 865 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 DEFB129Q9H1M3 183 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 PTCH2Q9Y6C5 1203 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 OTOFQ9HC10 1997 aa15.75■□□□□ 0.11
DDX54-206ENST00000549271 HSP90B1P14625 803 aaKnown RBP15.74■□□□□ 0.11
DDX54-206ENST00000549271 DUSP27Q5VZP5 1158 aa15.74■□□□□ 0.11
DDX54-206ENST00000549271 ANKRD18AQ8IVF6 992 aa15.74■□□□□ 0.11
DDX54-206ENST00000549271 PRO3102Q9H379 93 aa15.74■□□□□ 0.11
DDX54-206ENST00000549271 PPP1R12BO60237 982 aaPredicted RBP15.73■□□□□ 0.11
DDX54-206ENST00000549271 PDE8AO60658 829 aa15.73■□□□□ 0.11
DDX54-206ENST00000549271 SLC4A8Q2Y0W8 1093 aa15.73■□□□□ 0.11
DDX54-206ENST00000549271 COA1Q9GZY4 146 aa15.73■□□□□ 0.11
DDX54-206ENST00000549271 MBIPQ9NS73 344 aa15.73■□□□□ 0.11
DDX54-206ENST00000549271 MYH3P11055 1940 aa15.72■□□□□ 0.11
DDX54-206ENST00000549271 KIAA0825Q8IV33 1275 aa15.72■□□□□ 0.11
DDX54-206ENST00000549271 FBXW7Q969H0 707 aa15.72■□□□□ 0.11
DDX54-206ENST00000549271 CCDC85AQ96PX6 553 aaPredicted RBP15.72■□□□□ 0.11
DDX54-206ENST00000549271 IFT57Q9NWB7 429 aa15.72■□□□□ 0.11
DDX54-206ENST00000549271 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.72■□□□□ 0.11
DDX54-206ENST00000549271 PPP2R3BQ9Y5P8 575 aa15.72■□□□□ 0.11
DDX54-206ENST00000549271 ZSWIM8A7E2V4 1837 aa15.72■□□□□ 0.11
DDX54-206ENST00000549271 LAMA3Q16787 3333 aa15.71■□□□□ 0.11
DDX54-206ENST00000549271 PCCAP05165 728 aaPredicted RBP15.71■□□□□ 0.11
DDX54-206ENST00000549271 CALD1Q05682 793 aaKnown RBP15.71■□□□□ 0.11
DDX54-206ENST00000549271 ARHGEF6Q15052 776 aa15.71■□□□□ 0.11
DDX54-206ENST00000549271 TXNRD3Q86VQ6 643 aa15.71■□□□□ 0.11
DDX54-206ENST00000549271 MINPP1Q9UNW1 487 aa15.71■□□□□ 0.11
DDX54-206ENST00000549271 APAF1O14727 1248 aa15.7■□□□□ 0.1
DDX54-206ENST00000549271 CCT4P50991 539 aaKnown RBP15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 8.5 ms