RNA–Protein interactions for RNA: ENST00000549151.5

RAPGEF3-219, Transcript of Rap guanine nucleotide exchange factor 3, humanhuman

APPRIS P3 TSL 5 BASIC

Gene RAPGEF3, Length 3,265 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF3-219ENST00000549151 RABL6Q3YEC7 729 aaPredicted RBP13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 LRP10Q7Z4F1 713 aa13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 ZRSR1Q15695 479 aaKnown RBP13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 AOPEPQ8N6M6 819 aa13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 PLBD2Q8NHP8 589 aa13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 DCAF5Q96JK2 942 aa13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 RGPD5Q99666 1765 aa13.97□□□□□ -0.17
RAPGEF3-219ENST00000549151 NBPF26B4DH59 902 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 IGSF3O75054 1194 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 ADD1P35611 737 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 STX1AQ16623 288 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 NBPF14Q5TI25 921 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 ISM2Q6H9L7 571 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 NBPF10Q6P3W6 841 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 RBM43Q6ZSC3 357 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 ATG9AQ7Z3C6 839 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 NBPF15Q8N660 670 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 SMARCC2Q8TAQ2 1214 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 V9GYY5 206 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 MAST3O60307 1309 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 USP27XA6NNY8 438 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 M0R2C6 588 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 HMGB1P09429 215 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 PDIA3P30101 505 aaKnown RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 ZNF396Q96N95 335 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 CWC25Q9NXE8 425 aaPredicted RBP13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 MEGF6O75095 1541 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 JCADQ9P266 1359 aa13.96□□□□□ -0.17
RAPGEF3-219ENST00000549151 FOXO4P98177 505 aa13.96□□□□□ -0.18
RAPGEF3-219ENST00000549151 IQCB1Q15051 598 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 STK38Q15208 465 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 RCOR1Q9UKL0 485 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 USP54Q70EL1 1684 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 NPHP1O15259 732 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 CCDC112Q8NEF3 446 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 SYTL4Q96C24 671 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 OVOS2A0A0G2JMS6 1433 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 C5P01031 1676 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 RNF113AO15541 343 aaKnown RBP13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 SKILP12757 684 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 ZMYM1Q5SVZ6 1142 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 NAA16Q6N069 864 aaPredicted RBP13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 PI16Q6UXB8 463 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 OSBP2Q969R2 916 aa13.95□□□□□ -0.18
RAPGEF3-219ENST00000549151 SH3TC1Q8TE82 1336 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 CHD2O14647 1828 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 ADORA1P30542 326 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 CASP7P55210 303 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 TAF7LQ5H9L4 462 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 LLPHQ9BRT6 129 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 DNAJC5Q9H3Z4 198 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 HELLSQ9NRZ9 838 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 PCDHA7Q9UN72 937 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 CPLX1O14810 134 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 FAM160A1Q05DH4 1040 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 SNW1Q13573 536 aaKnown RBP13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 TTC39AQ5SRH9 613 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 CEP126Q9P2H0 1117 aa13.94□□□□□ -0.18
RAPGEF3-219ENST00000549151 KLF18A0A0U1RQI7 1052 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 CCDC69A6NI79 296 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 EYA2O00167 538 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 ATF3P18847 181 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 RXRAP19793 462 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 IL15P40933 162 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 EXOSC10Q01780 885 aaKnown RBP13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 LRRC8AQ8IWT6 810 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 CEP57L1Q8IYX8 460 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 DSCC1Q9BVC3 393 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 ANO10Q9NW15 660 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 GOLGA8BA8MQT2 603 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 SMC2O95347 1197 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 ILDR1Q86SU0 546 aaPredicted RBP13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 C8orf76Q96K31 380 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 CLIC4Q9Y696 253 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 CARMIL3Q8ND23 1372 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 CEP135Q66GS9 1140 aa13.93□□□□□ -0.18
RAPGEF3-219ENST00000549151 H7C1W4 665 aa13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 CTAGE5O15320 804 aa13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 FDPSP14324 419 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 NDUFA8P51970 172 aa13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 NCBP1Q09161 790 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 SMAP1Q8IYB5 467 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 MRPS27Q92552 414 aaKnown RBP13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 ORC3Q9UBD5 711 aaPredicted RBP13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 CCDC57Q2TAC2 916 aa13.92□□□□□ -0.18
RAPGEF3-219ENST00000549151 SMTNL1A8MU46 457 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 PRC1O43663 620 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 CCDC158Q5M9N0 1113 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 DHX40Q8IX18 779 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 APPP05067 770 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 MARCKSP29966 332 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 SCARF1Q14162 830 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 PTPN14Q15678 1187 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 AEBP2Q6ZN18 517 aaPredicted RBP13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 RALYLQ86SE5 291 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 C19orf44Q9H6X5 657 aa13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 AFDNP55196 1824 aaKnown RBP13.91□□□□□ -0.18
RAPGEF3-219ENST00000549151 IMMTQ16891 758 aaKnown RBP13.91□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms