RNA–Protein interactions for RNA: ENST00000549100.5

DEPDC4-206, Transcript of DEP domain containing 4, humanhuman

TSL 3

Gene DEPDC4, Length 501 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-206ENST00000549100 ABL1P00519 1130 aa3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 MESP2Q0VG99 397 aa3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 NAA30Q147X3 362 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 NOM1Q5C9Z4 860 aaKnown RBP3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 ZDHHC1Q8WTX9 485 aa3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 GTF3C2Q8WUA4 911 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 CHMP7Q8WUX9 453 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 TUT1Q9H6E5 874 aaKnown RBP3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 CABP1Q9NZU7 370 aa3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 SCHIP1Q9P0W5 487 aaPredicted RBP3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 ATAD2Q6PL18 1390 aa3.7□□□□□ -1.82
DEPDC4-206ENST00000549100 SYNJ1O43426 1573 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 FOXO3O43524 673 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 PRNPP04156 253 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 CPB1P15086 417 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 PERM1Q5SV97 790 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 SH3PXD2AQ5TCZ1 1133 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 ZNF428Q96B54 188 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 SAP130Q9H0E3 1048 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 BRD7Q9NPI1 651 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 EGFL7Q9UHF1 273 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 KCNH4Q9UQ05 1017 aa3.69□□□□□ -1.82
DEPDC4-206ENST00000549100 MEGF11A6BM72 1044 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 EML1O00423 815 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 CDK2AP1O14519 115 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 PPP1R12BO60237 982 aaPredicted RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 ICMTO60725 284 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 GRNP28799 593 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 KCNQ4P56696 695 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 KRTAP10-2P60368 255 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 PSMA6P60900 246 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 POTEAQ6S8J7 498 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 DNAJC14Q6Y2X3 702 aaPredicted RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 ZC3HAV1Q7Z2W4 902 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 NPM2Q86SE8 214 aaKnown RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 FAM35AQ86V20 835 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 SHISA5Q8N114 240 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 HELQQ8TDG4 1101 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 C2orf49Q9BVC5 232 aaPredicted RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 PIM2Q9P1W9 311 aa3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 BIN2Q9UBW5 565 aaPredicted RBP3.68□□□□□ -1.82
DEPDC4-206ENST00000549100 ATAD2BQ9ULI0 1458 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 ZBTB42B2RXF5 422 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 WISP1O95388 367 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 ZSCAN22P10073 491 aaPredicted RBP3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 ARHGAP4P98171 946 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 GGNQ86UU5 652 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 GLYCTKQ8IVS8 523 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 STAG2Q8N3U4 1231 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 C20orf173Q96LM9 149 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 FBXL18Q96ME1 805 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 CEP63Q96MT8 703 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 QTRT2Q9H974 415 aaKnown RBP3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 PAK6Q9NQU5 681 aaPredicted RBP3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 LRFN2Q9ULH4 789 aa3.67□□□□□ -1.82
DEPDC4-206ENST00000549100 TNFRSF10BO14763 440 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 MPSTP25325 297 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 NOS2P35228 1153 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 FKBP4Q02790 459 aaKnown RBP eCLIP3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 TEAD4Q15561 434 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 FAM26DQ5JW98 314 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 COX20Q5RI15 118 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 C16orf46Q6P387 395 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 LRRC56Q8IYG6 542 aaPredicted RBP3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 UTP4Q969X6 686 aaKnown RBP3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 VTI1AQ96AJ9 217 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 FAM46AQ96IP4 442 aaKnown RBP3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 HSH2DQ96JZ2 352 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 RAPGEFL1Q9UHV5 662 aa3.66□□□□□ -1.82
DEPDC4-206ENST00000549100 PEG3Q9GZU2 1588 aa3.65□□□□□ -1.82
DEPDC4-206ENST00000549100 SERTM1A2A2V5 107 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 NPR3P17342 541 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 HIRAP54198 1017 aaPredicted RBP3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 SF3B2Q13435 895 aaKnown RBP3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 SETDB1Q15047 1291 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 VSIG10LQ86VR7 867 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 CLEC10AQ8IUN9 316 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 SIAH1Q8IUQ4 282 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 ZNF280CQ8ND82 737 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 L3MBTL2Q969R5 705 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 NGLY1Q96IV0 654 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 MFSD14AQ96MC6 490 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 FAM83CQ9BQN1 747 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 ZNF232Q9UNY5 417 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 HCN4Q9Y3Q4 1203 aa3.65□□□□□ -1.83
DEPDC4-206ENST00000549100 CEP162Q5TB80 1403 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 ZBTB39O15060 712 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 INHBBP09529 407 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 CTSWP56202 376 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 NPAS4Q8IUM7 802 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 FAM20CQ8IXL6 584 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 ALDH16A1Q8IZ83 802 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 MYO19Q96H55 970 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 MYRFLQ96LU7 910 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 TOX2Q96NM4 488 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 SLC38A3Q99624 504 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 GSX2Q9BZM3 304 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 PHACTR1Q9C0D0 580 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 NEUROD4Q9HD90 331 aa3.64□□□□□ -1.83
DEPDC4-206ENST00000549100 CHMP3Q9Y3E7 222 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 22.7 ms